Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G041100 Phaseolus vulgaris HOM05D007825 ORTHO05D009693 1.2e-35 152.9 94 100.0
Lj5g0027478 Lotus japonicus HOM05D007825 ORTHO05D009693 7.9e-27 123.6 94 72.3
Glyma.13G154500 Glycine max HOM05D007825 ORTHO05D009693 5.6e-25 117.5 94 71.3
Glyma.09G026600 Glycine max HOM05D007825 ORTHO05D009693 6.2e-24 114.0 94 80.9
Ca_00897_v3 Cicer arietinum L. HOM05D007825 ORTHO05D009693 1.5e-22 109.4 94 63.8
Glyma.10G074000 Glycine max HOM05D007825 ORTHO05D009693 2.6e-22 108.6 94 77.7
Glyma.19G194978 Glycine max HOM05D007825 ORTHO05D009693 1.3e-21 106.3 95 58.9
Medtr1g059820 Medicago truncatula HOM05D007825 ORTHO05D009693 6.5e-21 104.0 94 61.7
Psat3g207080 Pisum sativum HOM05D007825 ORTHO05D009693 6.5e-21 104.0 94 67.0
TPR.G9902 Trifolium pratense HOM05D007825 ORTHO05D009693 5.5e-20 100.9 87 63.2
Rhsim03G0074400 Rhododendron simsii HOM05D001257 ORTHO05D007181 3.5e-19 98.2 90 58.9
Phvul.001G191100 Phaseolus vulgaris HOM05D007825 ORTHO05D009693 3.9e-18 94.7 95 54.7
Lalb_Chr02g0154901 Lupinus albus HOM05D007825 ORTHO05D009693 5.1e-18 94.4 94 59.6
GSVIVG01033861001 Vitis vinifera HOM05D007825 ORTHO05D009693 1.5e-17 92.8 100 55.0
arahy.Tifrunner.gnm1.ann1.KBFV5H Arachis hypogaea HOM05D001354 ORTHO05D007486 2.2e-16 89.0 93 60.2
Actinidia07924 Actinidia chinensis HOM05D001354 ORTHO05D007486 2.8e-16 88.6 84 59.5
Lalb_Chr10g0096381 Lupinus albus HOM05D007825 ORTHO05D009693 3.7e-16 88.2 84 58.3
Dinv31697 Davidia involucrata HOM05D007825 ORTHO05D009693 8.2e-16 87.0 100 52.0
Lalb_Chr17g0338831 Lupinus albus HOM05D007825 ORTHO05D009693 1.1e-15 86.7 87 57.5
arahy.Tifrunner.gnm1.ann1.24RTVW Arachis hypogaea HOM05D007825 ORTHO05D009693 3.1e-15 85.1 88 68.2
arahy.Tifrunner.gnm1.ann1.L43FYW Arachis hypogaea HOM05D007825 ORTHO05D009693 3.1e-15 85.1 88 68.2
arahy.Tifrunner.gnm1.ann1.S2NT6M Arachis hypogaea HOM05D007825 ORTHO05D009693 3.1e-15 85.1 83 62.7
TWI74G1133 Tripterygium wilfordii HOM05D007825 ORTHO05D009693 3.1e-15 85.1 88 50.0
Cpa.g.sc5.6 Carica papaya HOM05D007825 ORTHO05D009693 5.3e-15 84.3 88 53.4
Eucgr.A02998 Eucalyptus grandis HOM05D007825 ORTHO05D009693 9.0e-15 83.6 100 53.0
THA.LOC104799760 Tarenaya hassleriana HOM05D007825 ORTHO05D009693 2.2e-13 79.0 87 49.4
Thecc.05G090800 Theobroma cacao HOM05D007825 ORTHO05D009693 2.9e-13 78.6 84 51.2
Haze_12107 Corylus avellana HOM05D001354 ORTHO05D007486 5.0e-13 77.8 102 53.9
Atru.chr2.2492 Acer truncatum HOM05D007825 ORTHO05D009693 6.5e-13 77.4 82 48.8
QL07p038635 Quercus lobata HOM05D007825 ORTHO05D009693 8.5e-13 77.0 88 46.6
COL.COLO4_29710 Corchorus olitorius HOM05D007825 ORTHO05D009693 1.4e-12 76.3 96 58.3
Cc06_g05960 Coffea canephora HOM05D007825 ORTHO05D009693 1.9e-12 75.9 94 52.1
Solyc09g009930.2 Solanum lycopersicum HOM05D007825 ORTHO05D009693 1.9e-12 75.9 83 49.4
Sopen09g004680 Solanum pennellii HOM05D007825 ORTHO05D009693 1.9e-12 75.9 83 49.4
Manes.09G054200 Manihot esculenta HOM05D007825 ORTHO05D009693 3.2e-12 75.1 94 43.6
Sabra16G0083000 Salix brachista HOM05D007825 ORTHO05D009693 3.2e-12 75.1 94 43.6
BcaB02g07824 Brassica carinata HOM05D007825 ORTHO05D009693 4.2e-12 74.7 84 50.0
Potri.016G078700 Populus trichocarpa HOM05D007825 ORTHO05D009693 7.2e-12 73.9 88 44.3
PGSC0003DMG400008872 Solanum tuberosum HOM05D007825 ORTHO05D009693 7.2e-12 73.9 83 56.6
CiPaw.09G015200 Carya illinoinensis HOM05D007825 ORTHO05D009693 9.4e-12 73.6 87 54.0
Duzib093G1765 Durio zibethinus HOM05D007825 ORTHO05D009693 9.4e-12 73.6 83 49.4
AL5G33400 Arabidopsis lyrata HOM05D007825 ORTHO05D009693 1.2e-11 73.2 82 48.8
BcaB01g00352 Brassica carinata HOM05D007825 ORTHO05D009693 1.2e-11 73.2 84 48.8
BcaC07g39631 Brassica carinata HOM05D007825 ORTHO05D009693 1.2e-11 73.2 84 48.8
A09p45710 Brassica napus HOM05D007825 ORTHO05D009693 1.2e-11 73.2 84 48.8
C08p27910 Brassica napus HOM05D007825 ORTHO05D009693 1.2e-11 73.2 84 48.8
BolC8t50406H Brassica oleracea HOM05D007825 ORTHO05D009693 1.2e-11 73.2 84 48.8
BraA09t40032Z Brassica rapa HOM05D007825 ORTHO05D009693 1.2e-11 73.2 84 48.8
Thhalv10010896m.g Eutrema salsugineum HOM05D007825 ORTHO05D009693 1.2e-11 73.2 83 49.4
MD12G1027000 Malus domestica HOM05D007825 ORTHO05D009693 1.2e-11 73.2 87 47.1
Peaxi162Scf00404g00115 Petunia axillaris HOM05D007825 ORTHO05D009693 1.2e-11 73.2 87 54.0
Sp5g09670 Schrenkiella parvula HOM05D007825 ORTHO05D009693 1.2e-11 73.2 88 48.9
EL10Ac7g16903 Beta vulgaris HOM05D007825 ORTHO05D009693 1.6e-11 72.8 88 46.6
Carub.0005s1904 Capsella rubella HOM05D007825 ORTHO05D009693 1.6e-11 72.8 82 48.8
CARHR162440 Cardamine hirsuta HOM05D007825 ORTHO05D009693 2.7e-11 72.0 87 48.3
Prupe.7G104600 Prunus persica HOM05D007825 ORTHO05D009693 2.7e-11 72.0 99 47.5
Sc07g0005630 Simmondsia chinensis HOM05D007825 ORTHO05D009693 2.7e-11 72.0 83 48.2
Ah.15g090680 Amaranthus hybridus HOM05D007825 ORTHO05D009693 3.6e-11 71.6 87 46.0
SalBow3G1626 Salvia bowleyana HOM05D007825 ORTHO05D009693 3.6e-11 71.6 100 44.0
Cfa009073 Carpinus fangiana HOM05D007825 ORTHO05D009693 7.9e-11 70.5 104 52.9
Aqoxy2G01123 Aquilegia oxysepala HOM05D007825 ORTHO05D009693 1.0e-10 70.1 83 49.4
AT3G52620 Arabidopsis thaliana HOM05D007825 ORTHO05D009693 1.0e-10 70.1 82 45.1
TAR633G2289 Trochodendron aralioides HOM05D007825 ORTHO05D009693 1.0e-10 70.1 93 55.9
FAN05G0267 Fragaria x ananassa HOM05D007825 ORTHO05D009693 1.4e-10 69.7 96 44.8
AUR62006195 Chenopodium quinoa HOM05D007825 ORTHO05D009693 2.3e-10 68.9 90 43.3
MD14G1027100 Malus domestica HOM05D007825 ORTHO05D009693 2.3e-10 68.9 95 56.8
Nn2g14176 Nelumbo nucifera HOM05D007825 ORTHO05D009693 2.3e-10 68.9 104 51.9
Potri.006G211600 Populus trichocarpa HOM05D007825 ORTHO05D009693 2.3e-10 68.9 84 38.1
Migut.J01022 Erythranthe guttata HOM05D007825 ORTHO05D009693 3.0e-10 68.6 106 52.8
FAN14G3782 Fragaria x ananassa HOM05D007825 ORTHO05D009693 3.9e-10 68.2 96 44.8
FAN02G3309 Fragaria x ananassa HOM05D007825 ORTHO05D009693 5.1e-10 67.8 96 44.8
FAN14G2292 Fragaria x ananassa HOM05D007825 ORTHO05D009693 5.1e-10 67.8 96 44.8
Sabra06G0163100 Salix brachista HOM05D001354 ORTHO05D007486 1.1e-09 66.6 84 38.1
Aqoxy4G02759 Aquilegia oxysepala HOM05D007825 ORTHO05D009693 1.5e-09 66.2 96 50.0
DCAR_013397 Daucus carota HOM05D007825 ORTHO05D009693 1.5e-09 66.2 87 41.4
CsaV3_3G037370 Cucumis sativus L. HOM05D007825 ORTHO05D009693 2.0e-09 65.9 87 51.7
RcHm_v2.0_Chr3g0474201 Rosa chinensis HOM05D007825 ORTHO05D009693 2.5e-09 65.5 97 46.4
TAR623G0830 Trochodendron aralioides HOM05D007825 ORTHO05D009693 2.5e-09 65.5 93 54.8
AUR62037026 Chenopodium quinoa HOM05D007825 ORTHO05D009693 5.7e-09 64.3 90 42.2
MELO3C009481.2 Cucumis melo HOM05D007825 ORTHO05D009693 9.7e-09 63.5 87 55.2
ClCG10G018870 Citrullus lanatus HOM05D007825 ORTHO05D009693 1.7e-08 62.8 86 52.3
Sed0008191 Sechium edule HOM05D007825 ORTHO05D009693 1.7e-08 62.8 104 49.0
Nn6g34873 Nelumbo nucifera HOM05D007825 ORTHO05D009693 6.3e-08 60.8 105 53.3
DCAR_013400 Daucus carota HOM05D007825 ORTHO05D009693 1.1e-07 60.1 82 39.0
Aa31LG10G7690 Aethionema arabicum HOM05D007825 ORTHO05D009693 2.4e-07 58.9 83 42.2
Hma1.2p1_3516F.1_g336516 Hydrangea macrophylla HOM05D020730 ORTHO05D009693 5.3e-07 57.8 88 39.8
unitig_578.g16364 Utricularia gibba HOM05D001354 ORTHO05D007486 2.6e-06 55.5 93 38.7


User provided reference genes

Program Settings