Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G039500 Phaseolus vulgaris HOM05D004533 ORTHO05D005347 2.5e-163 578.9 338 100.0
Lalb_Chr17g0341371 Lupinus albus HOM05D004533 ORTHO05D005347 6.8e-105 384.8 340 74.1
Lalb_Chr10g0099071 Lupinus albus HOM05D004533 ORTHO05D005347 8.3e-103 377.9 340 74.1
Lj2g0015000 Lotus japonicus HOM05D004533 ORTHO05D005347 5.6e-99 365.2 339 73.5
Glyma.01G063800 Glycine max HOM05D004533 ORTHO05D005347 2.1e-98 363.2 350 74.6
VMungo1215G1442 Vigna mungo HOM05D004533 ORTHO05D005347 3.1e-97 359.4 223 96.4
Psat2g098360 Pisum sativum HOM05D004533 ORTHO05D005347 2.2e-87 326.6 340 63.5
Glyma.02G121400 Glycine max HOM05D004533 ORTHO05D005347 8.4e-87 324.7 357 69.2
Medtr5g046750 Medicago truncatula HOM05D004533 ORTHO05D005347 8.4e-87 324.7 343 67.1
QL03p073504 Quercus lobata HOM05D004533 ORTHO05D005347 4.2e-86 322.4 347 66.3
Manes.01G025900 Manihot esculenta HOM05D004533 ORTHO05D005347 6.0e-85 318.5 340 64.1
TPR.G38582 Trifolium pratense HOM05D004533 ORTHO05D005347 2.3e-84 316.6 338 64.2
Haze_11876 Corylus avellana HOM05D004533 ORTHO05D005347 8.1e-82 308.1 340 62.9
Sabra10G0118800 Salix brachista HOM05D004533 ORTHO05D005347 8.4e-79 298.1 346 61.8
Gohir.D02G131100 Gossypium hirsutum HOM05D004533 ORTHO05D005347 4.6e-77 292.4 341 62.8
Duzib248G0866 Durio zibethinus HOM05D004533 ORTHO05D005347 1.3e-76 290.8 342 62.3
Gohir.D13G084000 Gossypium hirsutum HOM05D004533 ORTHO05D005347 1.3e-76 290.8 341 61.6
Gorai.013G095800 Gossypium raimondii HOM05D004533 ORTHO05D005347 1.3e-76 290.8 341 61.6
Gohir.A03G105900 Gossypium hirsutum HOM05D004533 ORTHO05D005347 2.3e-76 290.0 341 55.4
Gohir.A13G084500 Gossypium hirsutum HOM05D004533 ORTHO05D005347 1.9e-75 287.0 341 61.3
CiPaw.05G123000 Carya illinoinensis HOM05D004533 ORTHO05D005347 2.5e-75 286.6 340 63.2
Duzib251G0596 Durio zibethinus HOM05D004533 ORTHO05D005347 2.5e-75 286.6 339 61.1
Ca_05043_v3 Cicer arietinum L. HOM05D004533 ORTHO05D005347 3.3e-75 286.2 342 62.3
Ca_19594_v3 Cicer arietinum L. HOM05D004533 ORTHO05D005347 3.3e-75 286.2 342 62.3
Gorai.005G147000 Gossypium raimondii HOM05D004533 ORTHO05D005347 1.3e-74 284.3 338 61.8
Thecc.02G326400 Theobroma cacao HOM05D004533 ORTHO05D005347 1.1e-73 281.2 339 60.2
Potri.010G154200 Populus trichocarpa HOM05D004533 ORTHO05D005347 3.1e-73 279.6 346 59.5
Duzib268G0904 Durio zibethinus HOM05D004533 ORTHO05D005347 5.3e-73 278.9 339 56.6
Cfa008857 Carpinus fangiana HOM05D004533 ORTHO05D005347 8.4e-71 271.6 340 58.5
Manes.05G112100 Manihot esculenta HOM05D004533 ORTHO05D005347 3.5e-69 266.2 340 56.8
CiPaw.06G093700 Carya illinoinensis HOM05D004533 ORTHO05D005347 2.8e-66 256.5 344 60.5
Potri.008G098200 Populus trichocarpa HOM05D004533 ORTHO05D005347 1.3e-63 247.7 347 56.5
TAR629G1049 Trochodendron aralioides HOM05D004533 ORTHO05D005347 7.9e-61 238.4 347 48.7
TAR371G0131 Trochodendron aralioides HOM05D004533 ORTHO05D005347 1.0e-60 238.0 339 53.7
Ciclev10032087m.g Citrus clementina HOM05D004533 ORTHO05D005347 1.3e-58 231.1 352 54.8
Dinv20147 Davidia involucrata HOM05D004533 ORTHO05D005347 1.1e-57 228.0 340 57.4
Hma1.2p1_3075F.1_g332390 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 1.4e-57 227.6 355 49.3
Sabra08G0074200 Salix brachista HOM05D004533 ORTHO05D005347 2.4e-57 226.9 348 54.9
Prupe.1G290400 Prunus persica HOM05D004533 ORTHO05D005347 5.3e-57 225.7 354 52.5
Dinv34043 Davidia involucrata HOM05D004533 ORTHO05D005347 2.0e-56 223.8 340 54.4
Cc11_g11730 Coffea canephora HOM05D004533 ORTHO05D005347 4.5e-56 222.6 350 51.1
Aqoxy3G03701 Aquilegia oxysepala HOM05D004533 ORTHO05D005347 1.0e-55 221.5 339 53.7
COL.COLO4_27845 Corchorus olitorius HOM05D004533 ORTHO05D005347 1.3e-55 221.1 356 51.7
CSS0048067 Camellia sinensis var. sinensis HOM05D004533 ORTHO05D005347 2.9e-55 219.9 350 53.7
arahy.Tifrunner.gnm1.ann1.PV72KB Arachis hypogaea HOM05D004533 ORTHO05D005347 1.2e-53 214.5 388 53.4
Nn4g23503 Nelumbo nucifera HOM05D004533 ORTHO05D005347 1.6e-53 214.2 341 51.6
arahy.Tifrunner.gnm1.ann1.NK9Z7F Arachis hypogaea HOM05D004533 ORTHO05D005347 1.8e-52 210.7 391 52.9
TAR374G1471 Trochodendron aralioides HOM05D004533 ORTHO05D005347 3.9e-52 209.5 272 52.2
Rhsim09G0125000 Rhododendron simsii HOM05D004533 ORTHO05D005347 1.1e-51 208.0 348 52.9
Eucgr.B03139 Eucalyptus grandis HOM05D004533 ORTHO05D005347 7.4e-51 205.3 359 51.5
Gorai.008G175700 Gossypium raimondii HOM05D004533 ORTHO05D005347 2.2e-50 203.8 334 44.3
Actinidia26533 Actinidia chinensis HOM05D004533 ORTHO05D005347 3.1e-49 199.9 346 51.4
Gohir.A12G159800 Gossypium hirsutum HOM05D004533 ORTHO05D005347 4.1e-49 199.5 329 51.7
Gohir.D12G163100 Gossypium hirsutum HOM05D004533 ORTHO05D005347 5.3e-49 199.1 327 51.4
TWI79G0987 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 1.2e-48 198.0 353 51.0
Hma1.2p1_0428F.1_g151070 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 1.0e-47 194.9 281 51.2
MSTRG.2297 Avicennia marina HOM05D004533 ORTHO05D005347 1.7e-47 194.1 354 41.5
Oeu048133.1 Olea europaea HOM05D004533 ORTHO05D005347 2.2e-47 193.7 331 48.0
Oeu048134.1 Olea europaea HOM05D004533 ORTHO05D005347 2.2e-47 193.7 331 48.0
Cpa.g.sc1.160 Carica papaya HOM05D004533 ORTHO05D005347 8.5e-47 191.8 360 51.7
ClCG08G010520 Citrullus lanatus HOM05D004533 ORTHO05D005347 2.5e-46 190.3 356 41.6
Oeu020361.1 Olea europaea HOM05D004533 ORTHO05D005347 4.2e-46 189.5 312 48.7
Sed0020971 Sechium edule HOM05D004533 ORTHO05D005347 7.2e-46 188.7 333 41.1
TWI31G0640 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 1.0e-44 184.9 352 48.3
TWI75G1153 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 2.3e-44 183.7 347 48.7
MELO3C011411.2 Cucumis melo HOM05D004533 ORTHO05D005347 1.5e-43 181.0 360 40.6
Hma1.2p1_0473F.1_g160260 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 1.5e-43 181.0 342 42.7
Oeu028724.1 Olea europaea HOM05D004533 ORTHO05D005347 2.0e-43 180.6 338 45.0
FAN22G0793 Fragaria x ananassa HOM05D004533 ORTHO05D005347 3.7e-42 176.4 356 48.6
RcHm_v2.0_Chr4g0437861 Rosa chinensis HOM05D004533 ORTHO05D005347 2.4e-41 173.7 361 48.2
CsaV3_6G033770 Cucumis sativus L. HOM05D004533 ORTHO05D005347 3.1e-41 173.3 364 39.6
FvH4_4g29630 Fragaria vesca HOM05D004533 ORTHO05D005347 3.1e-41 173.3 358 47.8
FAN12G3098 Fragaria x ananassa HOM05D004533 ORTHO05D005347 3.1e-41 173.3 358 47.8
MSTRG.13457 Avicennia marina HOM05D004533 ORTHO05D005347 4.1e-41 172.9 344 45.9
FAN07G1881 Fragaria x ananassa HOM05D004533 ORTHO05D005347 6.9e-41 172.2 360 48.6
FAN17G0049 Fragaria x ananassa HOM05D004533 ORTHO05D005347 9.1e-41 171.8 356 48.0
MD16G1058700 Malus domestica HOM05D004533 ORTHO05D005347 1.2e-40 171.4 344 47.4
Atru.chr11.1592 Acer truncatum HOM05D004533 ORTHO05D005347 1.5e-40 171.0 359 49.3
PSO017G3527 Papaver somniferum HOM05D004533 ORTHO05D005347 1.5e-40 171.0 350 39.7
DCAR_023748 Daucus carota HOM05D004533 ORTHO05D005347 4.5e-40 169.5 350 43.4
vmacro01308 Vaccinium macrocarpon HOM05D004533 ORTHO05D005347 7.7e-40 168.7 343 42.6
PSO478G4496 Papaver somniferum HOM05D004533 ORTHO05D005347 1.1e-38 164.9 349 39.0
Actinidia16147 Actinidia chinensis HOM05D004533 ORTHO05D005347 2.5e-38 163.7 345 47.5
MD13G1059400 Malus domestica HOM05D004533 ORTHO05D005347 1.6e-37 161.0 347 47.3
Actinidia13399 Actinidia chinensis HOM05D004533 ORTHO05D005347 4.7e-37 159.5 214 62.6
ECA233G1177 Erigeron canadensis HOM05D004533 ORTHO05D005347 3.0e-36 156.8 344 43.9
Actinidia19907 Actinidia chinensis HOM05D004533 ORTHO05D005347 1.5e-35 154.5 320 48.1
Peaxi162Scf00175g00062 Petunia axillaris HOM05D004533 ORTHO05D005347 2.6e-35 153.7 349 38.4
Rhsim12G0073600 Rhododendron simsii HOM05D004533 ORTHO05D005347 3.3e-35 153.3 350 39.7
DCAR_026684 Daucus carota HOM05D004533 ORTHO05D005347 3.7e-34 149.8 358 38.5
Nitab4.5_0006154g0010 Nicotiana tabacum HOM05D004533 ORTHO05D005347 5.3e-33 146.0 328 46.6
DCAR_030051 Daucus carota HOM05D004533 ORTHO05D005347 9.1e-33 145.2 350 40.3
ClCG05G023610 Citrullus lanatus HOM05D004533 ORTHO05D005347 2.2e-31 140.6 348 39.4
MSTRG.7732 Avicennia marina HOM05D004533 ORTHO05D005347 8.5e-31 138.7 337 42.1
Lsat_1_v5_gn_8_45920 Lactuca sativa HOM05D004533 ORTHO05D005347 1.5e-30 137.9 353 40.8
Nn3g17512 Nelumbo nucifera HOM05D004533 ORTHO05D005347 3.2e-30 136.7 317 43.2
MBI16_g39936_MAGBIO Magnolia biondii HOM05D004533 ORTHO05D005347 1.2e-29 134.8 336 39.0
Lsat_1_v5_gn_4_11700 Lactuca sativa HOM05D004533 ORTHO05D005347 3.6e-29 133.3 353 36.3
THA.LOC104798855 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 1.0e-28 131.7 365 39.5
THA.LOC104803161 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 1.0e-28 131.7 365 39.5
THA.LOC104822894 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 1.0e-28 131.7 365 39.5
ATR0827G049 Amborella trichopoda HOM05D004533 ORTHO05D005347 2.3e-28 130.6 336 38.7
Lj6P776T6 Lonicera japonica HOM05D004533 ORTHO05D005347 4.0e-28 129.8 199 46.7
SGA_v2.0_scaffold287G47174 Striga asiatica HOM05D004533 ORTHO05D005347 1.5e-27 127.9 368 40.2
CANSAT64G2295 Cannabis sativa HOM05D004533 ORTHO05D005347 3.3e-27 126.7 399 39.6
Ah.03g138730 Amaranthus hybridus HOM05D004533 ORTHO05D005347 5.7e-27 125.9 354 35.3
CsaV3_5G033410 Cucumis sativus L. HOM05D004533 ORTHO05D005347 7.5e-27 125.6 335 35.2
EL10Ac6g15027 Beta vulgaris HOM05D004533 ORTHO05D005347 1.3e-26 124.8 252 40.1
Sc11g0002570 Simmondsia chinensis HOM05D004533 ORTHO05D005347 4.8e-26 122.9 360 41.9
Nitab4.5_0000027g0050 Nicotiana tabacum HOM05D004533 ORTHO05D005347 3.1e-25 120.2 337 44.2
MELO3C012160.2 Cucumis melo HOM05D004533 ORTHO05D005347 1.0e-23 115.2 338 34.3
ECA234G4159 Erigeron canadensis HOM05D004533 ORTHO05D005347 1.0e-23 115.2 351 32.5
Ah.02g126770 Amaranthus hybridus HOM05D004533 ORTHO05D005347 6.5e-23 112.5 363 34.2
Solyc05g012030.1 Solanum lycopersicum HOM05D004533 ORTHO05D005347 8.5e-23 112.1 349 40.4
Sed0009680 Sechium edule HOM05D004533 ORTHO05D005347 2.5e-22 110.5 337 35.0
BcaB03g15876 Brassica carinata HOM05D004533 ORTHO05D005347 1.6e-21 107.8 365 38.4
HanXRQChr12g0363201 Helianthus annuus HOM05D004533 ORTHO05D005347 2.1e-21 107.5 336 36.6
THA.LOC104821996 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 8.0e-21 105.5 340 40.6
BraA02t06624Z Brassica rapa HOM05D004533 ORTHO05D005347 1.4e-20 104.8 384 36.5
PGR102G1315 Punica granatum HOM05D004533 ORTHO05D005347 4.0e-20 103.2 341 31.4
A07p35490 Brassica napus HOM05D004533 ORTHO05D005347 1.2e-19 101.7 363 36.9
BraA07t31139Z Brassica rapa HOM05D004533 ORTHO05D005347 1.2e-19 101.7 363 36.9
BcaC08g46370 Brassica carinata HOM05D004533 ORTHO05D005347 2.6e-19 100.5 363 36.9
BolC6t39358H Brassica oleracea HOM05D004533 ORTHO05D005347 2.6e-19 100.5 363 36.9
C06p40740 Brassica napus HOM05D004533 ORTHO05D005347 3.4e-19 100.1 364 37.4
Carub.0002s1576 Capsella rubella HOM05D004533 ORTHO05D005347 5.7e-19 99.4 339 33.9
Sp5g24200 Schrenkiella parvula HOM05D004533 ORTHO05D005347 5.7e-19 99.4 345 37.4
DCAR_007202 Daucus carota HOM05D004533 ORTHO05D005347 6.3e-18 95.9 352 30.4
A02p15640 Brassica napus HOM05D004533 ORTHO05D005347 8.3e-18 95.5 383 35.5
AT1G69160 Arabidopsis thaliana HOM05D004533 ORTHO05D005347 5.4e-17 92.8 368 37.0
Thhalv10018878m.g Eutrema salsugineum HOM05D004533 ORTHO05D005347 5.4e-17 92.8 341 36.4
Sc04g0007440 Simmondsia chinensis HOM05D004533 ORTHO05D005347 5.4e-17 92.8 342 37.7
Sopen05g006810 Solanum pennellii HOM05D004533 ORTHO05D005347 9.1e-17 92.0 293 40.6
PGSC0003DMG400028307 Solanum tuberosum HOM05D004533 ORTHO05D005347 4.5e-16 89.7 348 32.5
C02p26000 Brassica napus HOM05D004533 ORTHO05D005347 2.9e-15 87.0 372 34.9
BolC2t08676H Brassica oleracea HOM05D004533 ORTHO05D005347 6.5e-15 85.9 372 35.5
PGR119G0103 Punica granatum HOM05D004533 ORTHO05D005347 2.5e-14 84.0 346 38.4
CARHR062030 Cardamine hirsuta HOM05D004533 ORTHO05D005347 4.2e-14 83.2 360 35.6
AL2G28250 Arabidopsis lyrata HOM05D004533 ORTHO05D005347 1.2e-13 81.6 370 35.7
Aa31LG4G11830 Aethionema arabicum HOM05D004533 ORTHO05D005347 1.6e-13 81.3 315 41.3
PSO782G4709 Papaver somniferum HOM05D004533 ORTHO05D005347 2.8e-13 80.5 334 32.9
BcaC03g15057 Brassica carinata HOM05D004533 ORTHO05D005347 6.1e-13 79.3 371 34.2
PSO063G5982 Papaver somniferum HOM05D004533 ORTHO05D005347 1.0e-12 78.6 324 31.8
CDE02G4104 Ceratophyllum demersum HOM05D004533 ORTHO05D005347 1.1e-09 68.6 300 27.7
Migut.E00039 Erythranthe guttata HOM05D004533 ORTHO05D005347 3.1e-09 67.0 331 36.0
GSVIVG01012248001 Vitis vinifera HOM05D004533 ORTHO05D005347 1.3e-07 61.6 44 68.2
BcaC08g45911 Brassica carinata HOM05D004533 ORTHO05D005347 5.0e-07 59.7 282 30.1
BcaC08g45912 Brassica carinata HOM05D004533 ORTHO05D005347 2.5e-06 57.4 282 29.8
TAR629G3385 Trochodendron aralioides HOM05D004533 ORTHO05D005347 3.3e-06 57.0 163 32.5


User provided reference genes

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