Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G037201 Phaseolus vulgaris HOM05D006345 ORTHO05D007428 9.4e-147 523.5 258 100.0
VMungo1383G2204 Vigna mungo HOM05D006345 ORTHO05D007428 1.8e-134 482.6 258 91.5
Glyma.01G139633 Glycine max HOM05D006345 ORTHO05D007428 7.7e-133 477.2 259 90.3
Glyma.03G027700 Glycine max HOM05D006345 ORTHO05D007428 5.0e-132 474.6 256 88.7
Lj3g0013440 Lotus japonicus HOM05D006345 ORTHO05D007428 4.1e-126 454.9 257 87.5
Psat7g230920 Pisum sativum HOM05D006345 ORTHO05D007428 1.5e-123 446.4 259 84.9
Medtr4g024860 Medicago truncatula HOM05D000001 ORTHO05D000003 2.5e-123 445.7 257 83.7
TPR.G7580 Trifolium pratense HOM05D006345 ORTHO05D007428 2.7e-122 442.2 258 84.1
Lalb_Chr07g0189941 Lupinus albus HOM05D006345 ORTHO05D007428 6.8e-121 437.6 256 82.8
Ca_19950_v3 Cicer arietinum L. HOM05D006345 ORTHO05D007428 3.4e-120 435.3 262 81.3
arahy.Tifrunner.gnm1.ann1.G9BQRV Arachis hypogaea HOM05D006345 ORTHO05D007428 2.2e-119 432.6 259 81.9
arahy.Tifrunner.gnm1.ann1.P3RVZQ Arachis hypogaea HOM05D006345 ORTHO05D007428 2.2e-119 432.6 259 82.2
Lalb_Chr13g0291791 Lupinus albus HOM05D006345 ORTHO05D007428 4.1e-118 428.3 256 81.6
arahy.Tifrunner.gnm1.ann1.W97VC3 Arachis hypogaea HOM05D006345 ORTHO05D007428 7.0e-118 427.6 259 81.1
arahy.Tifrunner.gnm1.ann1.S1VR06 Arachis hypogaea HOM05D006345 ORTHO05D007428 2.0e-117 426.0 259 80.7
CiPaw.01G263700 Carya illinoinensis HOM05D006345 ORTHO05D007428 7.0e-110 401.0 247 77.7
Cpa.g.sc12.137 Carica papaya HOM05D006345 ORTHO05D007428 5.9e-109 397.9 247 77.7
Dinv19690 Davidia involucrata HOM05D006345 ORTHO05D007428 4.3e-107 391.7 253 77.1
CSS0008102 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 7.3e-107 391.0 246 77.6
QL08p052794 Quercus lobata HOM05D006345 ORTHO05D007428 2.8e-106 389.0 252 75.8
Sed0017834 Sechium edule HOM05D006345 ORTHO05D007428 3.6e-106 388.7 252 74.2
ClCG02G007550 Citrullus lanatus HOM05D006345 ORTHO05D007428 1.4e-105 386.7 257 72.4
Ciclev10016345m.g Citrus clementina HOM05D006345 ORTHO05D007428 1.4e-105 386.7 252 75.8
Nn3g17198 Nelumbo nucifera HOM05D006345 ORTHO05D007428 8.9e-105 384.0 257 71.2
CsaV3_7G007230 Cucumis sativus L. HOM05D006345 ORTHO05D007428 5.8e-104 381.3 252 72.6
Sed0021159 Sechium edule HOM05D006345 ORTHO05D007428 5.8e-104 381.3 252 72.6
MELO3C018575.2 Cucumis melo HOM05D006345 ORTHO05D007428 7.5e-104 380.9 252 72.6
Duzib212G0272 Durio zibethinus HOM05D006345 ORTHO05D007428 9.8e-104 380.6 247 75.3
Sc05g0003040 Simmondsia chinensis HOM05D006345 ORTHO05D007428 1.3e-103 380.2 252 73.8
COL.COLO4_13882 Corchorus olitorius HOM05D006345 ORTHO05D007428 4.9e-103 378.3 252 74.2
TAR624G0710 Trochodendron aralioides HOM05D006345 ORTHO05D007428 8.3e-103 377.5 247 73.7
RcHm_v2.0_Chr5g0022101 Rosa chinensis HOM05D006345 ORTHO05D007428 1.4e-102 376.7 252 74.2
Thecc.04G283900 Theobroma cacao HOM05D006345 ORTHO05D007428 5.4e-102 374.8 250 73.2
Sabra01G0052000 Salix brachista HOM05D006345 ORTHO05D007428 7.0e-102 374.4 252 73.4
Rhsim13G0136400 Rhododendron simsii HOM05D006345 ORTHO05D007428 1.2e-101 373.6 254 73.6
Prupe.4G121300 Prunus persica HOM05D006345 ORTHO05D007428 1.6e-101 373.2 250 74.8
Peaxi162Scf00062g10131 Petunia axillaris HOM05D006345 ORTHO05D007428 2.0e-101 372.9 215 84.2
Aqoxy7G02153 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 4.6e-101 371.7 247 70.9
CiPaw.14G048700 Carya illinoinensis HOM05D006345 ORTHO05D007428 3.0e-100 369.0 229 76.0
Nitab4.5_0008647g0020 Nicotiana tabacum HOM05D006345 ORTHO05D007428 6.6e-100 367.9 217 82.0
Nitab4.5_0001925g0110 Nicotiana tabacum HOM05D006345 ORTHO05D007428 8.6e-100 367.5 219 80.8
THA.LOC104822694 Tarenaya hassleriana HOM05D006345 ORTHO05D007428 1.1e-99 367.1 249 73.1
PGSC0003DMG400023836 Solanum tuberosum HOM05D006345 ORTHO05D007428 1.5e-99 366.7 217 82.0
CAN.G575.62 Capsicum annuum HOM05D006345 ORTHO05D007428 1.9e-99 366.3 216 81.9
PGR042G3945 Punica granatum HOM05D006345 ORTHO05D007428 2.5e-99 365.9 245 72.2
Gorai.011G189500 Gossypium raimondii HOM05D006345 ORTHO05D007428 3.3e-99 365.5 253 71.5
Cc09_g04580 Coffea canephora HOM05D006345 ORTHO05D007428 4.3e-99 365.2 244 73.4
Gohir.A10G163600 Gossypium hirsutum HOM05D006345 ORTHO05D007428 4.3e-99 365.2 246 72.8
FvH4_3g13390 Fragaria vesca HOM05D006345 ORTHO05D007428 7.3e-99 364.4 252 71.4
FAN21G0075 Fragaria x ananassa HOM05D006345 ORTHO05D007428 7.3e-99 364.4 252 71.4
Potri.001G073700 Populus trichocarpa HOM05D006345 ORTHO05D007428 2.1e-98 362.8 252 71.8
MBI16_g30839_MAGBIO Magnolia biondii HOM05D006345 ORTHO05D007428 3.6e-98 362.1 243 71.6
Oeu012935.1 Olea europaea HOM05D006345 ORTHO05D007428 3.6e-98 362.1 217 80.6
FAN11G3812 Fragaria x ananassa HOM05D006345 ORTHO05D007428 4.7e-98 361.7 252 71.0
Cc06_g02140 Coffea canephora HOM05D006345 ORTHO05D007428 6.2e-98 361.3 250 70.8
Manes.16G061100 Manihot esculenta HOM05D006345 ORTHO05D007428 6.2e-98 361.3 252 70.6
MSTRG.21400 Avicennia marina HOM05D006345 ORTHO05D007428 8.1e-98 360.9 256 71.5
FAN25G2350 Fragaria x ananassa HOM05D006345 ORTHO05D007428 8.1e-98 360.9 252 71.0
MD05G1242200 Malus domestica HOM05D006345 ORTHO05D007428 1.8e-97 359.8 250 70.4
FAN16G3736 Fragaria x ananassa HOM05D006345 ORTHO05D007428 4.0e-97 358.6 252 71.0
Gohir.D10G170000 Gossypium hirsutum HOM05D006345 ORTHO05D007428 5.2e-97 358.2 253 69.6
Sopen12g034690 Solanum pennellii HOM05D006345 ORTHO05D007428 8.9e-97 357.5 216 80.6
TWI53G2073 Tripterygium wilfordii HOM05D006345 ORTHO05D007428 1.5e-96 356.7 252 69.4
DCAR_001254 Daucus carota HOM05D006345 ORTHO05D007428 3.4e-96 355.5 248 71.0
Oeu017184.1 Olea europaea HOM05D006345 ORTHO05D007428 4.4e-96 355.1 215 80.9
SalBow7G0027 Salvia bowleyana HOM05D006345 ORTHO05D007428 1.3e-95 353.6 242 72.3
PSO675G7514 Papaver somniferum HOM05D006345 ORTHO05D007428 1.4e-94 350.1 258 67.8
Eucgr.F03783 Eucalyptus grandis HOM05D006345 ORTHO05D007428 1.2e-93 347.1 260 66.2
CANSAT11G1250 Cannabis sativa HOM05D006345 ORTHO05D007428 1.6e-93 346.7 214 78.5
PSO541G0968 Papaver somniferum HOM05D006345 ORTHO05D007428 4.6e-93 345.1 258 67.1
HanXRQChr14g0447431 Helianthus annuus HOM05D006345 ORTHO05D007428 7.8e-93 344.4 220 74.1
ECA238G2485 Erigeron canadensis HOM05D006345 ORTHO05D007428 1.0e-92 344.0 245 68.6
Aqoxy3G02382 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 1.3e-92 343.6 216 74.5
Ah.07g202050 Amaranthus hybridus HOM05D006345 ORTHO05D007428 2.3e-92 342.8 250 66.0
AT3G13440 Arabidopsis thaliana HOM05D006345 ORTHO05D007428 3.0e-92 342.4 232 70.7
BcaC09g48312 Brassica carinata HOM05D006345 ORTHO05D007428 3.9e-92 342.0 228 72.4
C01p51620 Brassica napus HOM05D006345 ORTHO05D007428 3.9e-92 342.0 228 72.4
BolC1t05105H Brassica oleracea HOM05D006345 ORTHO05D007428 3.9e-92 342.0 228 72.4
EL10Ac3g05939 Beta vulgaris HOM05D006345 ORTHO05D007428 5.1e-92 341.7 252 65.9
Aa31LG8G650 Aethionema arabicum HOM05D006345 ORTHO05D007428 8.6e-92 340.9 248 68.1
AL3G25340 Arabidopsis lyrata HOM05D006345 ORTHO05D007428 8.6e-92 340.9 232 70.7
Migut.D00572 Erythranthe guttata HOM05D006345 ORTHO05D007428 1.9e-91 339.7 216 75.5
SalBow2G1193 Salvia bowleyana HOM05D006345 ORTHO05D007428 5.6e-91 338.2 212 76.9
unitig_52.g17581 Utricularia gibba HOM05D006345 ORTHO05D007428 9.5e-91 337.4 249 67.5
Carub.0003s1288 Capsella rubella HOM05D006345 ORTHO05D007428 2.8e-90 335.9 238 69.7
Lsat_1_v5_gn_3_103240 Lactuca sativa HOM05D006345 ORTHO05D007428 2.8e-90 335.9 224 74.1
PSO782G3410 Papaver somniferum HOM05D006345 ORTHO05D007428 2.8e-90 335.9 229 72.5
A01p40130 Brassica napus HOM05D006345 ORTHO05D007428 3.6e-90 335.5 228 71.1
CARHR088090 Cardamine hirsuta HOM05D006345 ORTHO05D007428 3.6e-90 335.5 228 71.5
Thhalv10021414m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 8.1e-90 334.3 227 71.4
BraA01t04054Z Brassica rapa HOM05D006345 ORTHO05D007428 1.4e-89 333.6 228 70.6
Sp3g11640 Schrenkiella parvula HOM05D006345 ORTHO05D007428 1.4e-89 333.6 227 71.4
ATR0561G247 Amborella trichopoda HOM05D006345 ORTHO05D007428 6.8e-89 331.3 244 65.6
AUR62015383 Chenopodium quinoa HOM05D006345 ORTHO05D007428 1.5e-88 330.1 241 68.5
CDE04G1044 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 2.6e-88 329.3 254 62.6
BraA05t22416Z Brassica rapa HOM05D002140 ORTHO05D007428 3.4e-88 328.9 227 70.5
BcaB04g21015 Brassica carinata HOM05D006345 ORTHO05D007428 4.4e-88 328.6 228 70.2
HPP92_018755 Vanilla planifolia HOM05D006345 ORTHO05D007428 7.6e-88 327.8 255 63.5
Carub.0006s3398 Capsella rubella HOM05D006345 ORTHO05D007428 1.3e-87 327.0 224 71.0
BcaC05g29179 Brassica carinata HOM05D002140 ORTHO05D007428 2.9e-87 325.9 225 70.2
C05p54470 Brassica napus HOM05D002140 ORTHO05D007428 2.9e-87 325.9 225 70.2
BolC5t34114H Brassica oleracea HOM05D002140 ORTHO05D007428 2.9e-87 325.9 225 70.2
SGA_v2.0_scaffold8G04616 Striga asiatica HOM05D006345 ORTHO05D007428 2.9e-87 325.9 211 73.9
CDE06G0136 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 1.4e-86 323.6 214 71.0
Ah.15g099610 Amaranthus hybridus HOM05D006345 ORTHO05D007428 2.4e-86 322.8 217 71.9
A05p36090 Brassica napus HOM05D002140 ORTHO05D007428 2.4e-86 322.8 227 68.7
Mapoly0069s0066 Marchantia polymorpha HOM05D006345 ORTHO05D007428 1.0e-84 317.4 241 62.7
Os03g0824200 Oryza sativa ssp. japonica HOM05D006345 ORTHO05D007428 3.0e-84 315.8 240 62.9
SHI16738 Sapria himalayana HOM05D006345 ORTHO05D007428 1.2e-82 310.5 209 72.2
Pp3c9_17440 Physcomitrium patens HOM05D006345 ORTHO05D007428 3.6e-82 308.9 245 61.6
Zm00001eb211470 Zea mays HOM05D006345 ORTHO05D007428 2.6e-80 302.8 218 64.7
Solyc12g100070.3 Solanum lycopersicum HOM05D006345 ORTHO05D007428 4.9e-79 298.5 180 80.0
CBR_g45447 Chara braunii HOM05D006345 ORTHO05D007428 1.1e-78 297.4 243 58.0
SMO358G0200 Selaginella moellendorffii HOM05D006345 ORTHO05D007428 5.4e-78 295.0 210 66.7
Lsat_1_v5_gn_2_63801 Lactuca sativa HOM05D006345 ORTHO05D007428 6.0e-77 291.6 247 59.9
AagrBONN_evm.TU.Sc2ySwM_117.4015 Anthoceros agrestis HOM05D006345 ORTHO05D007428 6.6e-76 288.1 246 56.5
Thhalv10009961m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 1.8e-73 280.0 228 61.8
AUR62002307 Chenopodium quinoa HOM05D006345 ORTHO05D007428 6.4e-71 271.6 242 59.5
Zm00001eb187530 Zea mays HOM05D006345 ORTHO05D007428 4.0e-65 252.3 186 64.0
SEGI_21458 Sequoiadendron giganteum HOM05D006345 ORTHO05D007428 4.3e-59 232.3 163 68.1
CSS0000171 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 1.5e-51 207.2 139 73.4
Zm00001eb141630 Zea mays HOM05D006345 ORTHO05D007428 2.5e-46 189.9 144 61.8
CAN.G1126.44 Capsicum annuum HOM05D006345 ORTHO05D007428 7.2e-46 188.3 161 60.9
Cre01.g036750 Chlamydomonas reinhardtii HOM05D006345 ORTHO05D007428 7.2e-46 188.3 212 45.8
Potri.003G157201 Populus trichocarpa HOM05D006345 ORTHO05D007428 8.5e-39 164.9 114 69.3
Sabra03G0114100 Salix brachista HOM05D000029 ORTHO05D000854 4.5e-32 142.5 190 44.2
MCO02G297 Micromonas commoda HOM05D006345 ORTHO05D007428 5.9e-32 142.1 170 43.5
Zm00001eb356470 Zea mays HOM05D006345 ORTHO05D007428 7.2e-30 135.2 108 61.1
ATR0006G036 Amborella trichopoda HOM05D006345 ORTHO05D007428 1.0e-12 78.2 49 73.5
Lj1P1152T38 Lonicera japonica HOM05D006345 ORTHO05D007428 1.2e-11 74.7 46 71.7
GSVIVG01023955001 Vitis vinifera HOM05D000593 ORTHO05D000562 1.6e-08 64.3 40 67.5
Hund02296 Selenicereus undatus HOM05D006002 ORTHO05D007651 5.5e-06 55.8 190 26.3
HanXRQChr11g0335201 Helianthus annuus HOM05D006002 ORTHO05D007651 7.2e-06 55.5 157 28.0


User provided reference genes

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