Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 6.8e-154 547.4 290 100.0
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 1.8e-130 469.5 291 90.0
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 1.9e-116 422.9 250 91.6
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 6.7e-109 397.9 298 76.5
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 1.1e-108 397.1 300 74.7
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 4.3e-108 395.2 309 74.8
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 1.3e-107 393.7 300 75.3
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 2.6e-105 386.0 302 75.8
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 5.0e-104 381.7 293 74.4
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 2.1e-102 376.3 301 74.1
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 1.4e-95 353.6 293 71.3
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 1.9e-95 353.2 305 68.9
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 3.0e-93 345.9 297 67.0
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 5.1e-93 345.1 307 65.1
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 8.2e-91 337.8 289 67.5
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 1.4e-90 337.0 257 70.8
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 1.8e-90 336.7 261 70.1
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 2.4e-90 336.3 299 64.5
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 5.3e-90 335.1 265 70.2
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 3.4e-89 332.4 276 67.4
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 4.5e-89 332.0 301 63.5
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 7.7e-89 331.3 265 70.2
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.7e-88 330.1 295 63.4
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.7e-88 330.1 295 62.7
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 1.9e-87 326.6 268 66.8
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 1.9e-87 326.6 276 64.1
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 3.2e-87 325.9 279 66.7
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 4.2e-87 325.5 273 66.7
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 5.5e-87 325.1 223 74.9
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 1.5e-84 317.0 291 62.2
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.6e-84 316.2 301 61.8
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 2.6e-84 316.2 216 74.5
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 2.8e-83 312.8 226 73.0
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 8.2e-83 311.2 219 72.6
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 1.4e-82 310.5 215 73.0
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 5.3e-82 308.5 272 64.0
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 1.2e-81 307.4 272 62.9
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 1.2e-81 307.4 279 61.3
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 3.5e-81 305.8 229 69.9
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 4.5e-81 305.4 296 59.1
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 4.5e-81 305.4 268 63.4
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 7.7e-81 304.7 302 59.3
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 2.2e-80 303.1 304 60.2
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 2.9e-80 302.8 299 58.2
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 3.8e-80 302.4 294 59.5
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 6.5e-80 301.6 304 59.5
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 1.1e-79 300.8 226 69.9
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 1.5e-79 300.4 267 63.3
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 1.9e-79 300.1 272 60.7
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 2.7e-78 296.2 240 67.5
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 1.0e-77 294.3 226 67.7
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 1.4e-77 293.9 225 66.2
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 1.4e-77 293.9 226 67.7
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 6.7e-77 291.6 230 66.5
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 6.7e-77 291.6 229 65.9
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 6.7e-77 291.6 302 57.9
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 6.7e-77 291.6 193 77.2
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 1.2e-76 290.8 253 62.8
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 2.0e-76 290.0 218 71.1
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 3.3e-76 289.3 212 70.8
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 3.3e-76 289.3 226 67.3
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 9.7e-76 287.7 261 59.8
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 2.2e-75 286.6 291 58.1
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.4e-74 283.9 339 52.8
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 3.1e-74 282.7 287 58.5
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 3.1e-74 282.7 293 57.7
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 4.1e-74 282.3 242 62.0
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 7.0e-74 281.6 287 58.5
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 9.1e-74 281.2 207 69.6
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 1.5e-71 273.9 256 61.7
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 1.5e-71 273.9 287 57.8
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 4.2e-71 272.3 191 73.3
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 5.5e-71 271.9 191 72.8
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 2.7e-70 269.6 290 54.5
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 2.0e-68 263.5 211 63.0
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 3.4e-68 262.7 175 75.4
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 2.8e-67 259.6 373 47.7
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 6.3e-67 258.5 189 71.4
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.1e-66 257.7 277 56.0
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.8e-66 256.9 277 56.0
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 9.1e-66 254.6 179 73.2
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 2.0e-65 253.4 311 50.8
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 2.2e-64 250.0 218 62.4
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 8.5e-64 248.1 228 63.6
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 1.1e-63 247.7 309 49.5
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 1.5e-63 247.3 211 57.8
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 2.1e-62 243.4 238 52.5
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 2.8e-62 243.0 211 60.2
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 3.6e-62 242.7 211 58.3
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 1.8e-61 240.4 265 55.1
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 5.2e-61 238.8 265 54.7
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 2.6e-60 236.5 186 69.4
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 4.4e-60 235.7 227 58.1
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 4.4e-60 235.7 306 50.0
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 9.2e-58 228.0 202 55.9
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 2.5e-55 219.9 176 63.6
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 3.0e-53 213.0 200 61.5
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 7.0e-50 201.8 136 75.0
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 7.8e-49 198.4 179 62.0
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 1.9e-47 193.7 190 56.3
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 5.6e-47 192.2 174 59.2
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 2.2e-43 180.3 194 58.8
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 1.1e-42 177.9 226 48.2
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 1.9e-42 177.2 199 52.3
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 2.4e-42 176.8 247 40.1
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 7.3e-39 165.2 211 48.8
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 1.4e-37 161.0 143 55.2
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 3.1e-37 159.8 229 45.4
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 1.2e-36 157.9 152 59.2
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 1.3e-35 154.5 248 44.4
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 1.7e-35 154.1 146 61.6
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 6.4e-35 152.1 116 68.1
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 8.3e-35 151.8 223 39.5
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 3.5e-25 119.8 148 46.6
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 6.6e-24 115.5 187 37.4
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 1.6e-22 110.9 178 34.8
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 2.6e-20 103.6 192 35.4
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 5.1e-16 89.4 114 45.6
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 1.4e-13 81.3 69 65.2
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 4.5e-12 76.3 90 48.9
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 9.3e-10 68.6 53 64.2
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 3.3e-07 60.1 96 44.8


User provided reference genes

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