Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 5.0e-260 900.6 453 100.0
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 1.0e-188 663.7 539 67.5
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 7.4e-155 551.2 456 66.2
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 1.4e-153 547.0 461 65.7
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 2.3e-148 529.6 436 65.6
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 2.2e-146 523.1 441 63.0
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 4.1e-145 518.8 463 62.4
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 5.3e-145 518.5 392 70.2
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 4.5e-144 515.4 403 66.5
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 1.3e-143 513.8 411 65.7
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.7e-143 513.5 350 74.0
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 1.7e-143 513.5 423 66.4
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 1.4e-142 510.4 450 62.7
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 2.1e-141 506.5 448 61.4
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 7.9e-141 504.6 349 72.2
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 1.0e-140 504.2 384 69.3
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 2.3e-140 503.1 435 64.4
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 3.9e-140 502.3 372 69.1
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 5.1e-140 501.9 398 66.6
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.5e-139 499.6 349 71.3
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 3.3e-139 499.2 377 65.5
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 2.2e-138 496.5 395 67.8
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 5.3e-137 491.9 355 68.7
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 2.9e-135 486.1 514 54.3
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 1.4e-134 483.8 374 66.3
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 1.9e-134 483.4 435 60.0
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 5.5e-134 481.9 452 60.0
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 1.2e-133 480.7 524 54.8
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 6.1e-133 478.4 433 58.9
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 1.0e-132 477.6 422 60.4
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 3.9e-132 475.7 369 64.8
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 9.7e-131 471.1 416 62.5
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 9.7e-131 471.1 460 58.0
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 1.7e-130 470.3 430 59.3
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 2.8e-130 469.5 417 64.0
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 2.8e-130 469.5 386 63.0
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 2.8e-130 469.5 347 69.5
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 4.8e-130 468.8 460 57.6
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 4.8e-130 468.8 439 58.8
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 6.3e-130 468.4 391 62.1
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 1.1e-129 467.6 449 57.2
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 1.4e-129 467.2 405 60.5
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 1.8e-129 466.8 356 65.4
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 2.4e-129 466.5 354 65.0
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 3.1e-129 466.1 388 62.9
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 9.1e-129 464.5 362 66.0
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 1.5e-128 463.8 354 65.0
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 2.0e-128 463.4 443 57.3
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 5.9e-128 461.8 446 55.8
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 1.3e-127 460.7 452 56.2
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 1.7e-127 460.3 449 55.9
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 1.7e-127 460.3 459 56.6
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 5.0e-127 458.8 437 58.8
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 8.5e-127 458.0 445 55.1
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 1.9e-126 456.8 335 70.1
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.9e-126 456.8 400 61.8
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 9.4e-126 454.5 451 55.0
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 1.2e-125 454.1 379 62.8
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.6e-125 452.6 454 54.6
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 6.1e-125 451.8 382 63.6
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 1.4e-124 450.7 350 62.9
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 3.9e-124 449.1 347 66.0
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.9e-124 449.1 343 68.5
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 8.8e-124 448.0 458 54.4
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 8.8e-124 448.0 358 66.2
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 1.1e-123 447.6 430 57.0
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 5.7e-123 445.3 352 66.8
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 7.4e-123 444.9 346 65.3
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 1.3e-122 444.1 368 61.4
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 2.2e-122 443.4 401 57.6
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 1.8e-121 440.3 442 55.2
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.8e-121 440.3 368 64.1
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 1.8e-121 440.3 317 68.8
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 1.6e-120 437.2 363 64.2
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 2.6e-120 436.4 347 64.8
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 1.0e-119 434.5 418 55.0
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 1.7e-119 433.7 318 67.0
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 1.5e-118 430.6 443 56.0
Cc04_g06310 Coffea canephora HOM05D005158 ORTHO05D005510 1.2e-117 427.6 387 57.6
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.6e-117 426.0 329 67.5
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 6.7e-116 421.8 357 59.9
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 3.3e-115 419.5 382 56.8
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 4.4e-115 419.1 314 66.9
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 1.7e-114 417.2 390 57.2
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 6.3e-114 415.2 387 56.8
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 7.7e-112 408.3 317 63.4
Migut.D01553 Erythranthe guttata HOM05D005158 ORTHO05D005510 1.9e-110 403.7 350 57.7
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 8.3e-106 388.3 295 64.1
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 1.0e-103 381.3 257 70.4
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 5.0e-103 379.0 305 65.6
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 5.0e-103 379.0 347 60.5
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 2.5e-102 376.7 330 60.0
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 3.6e-101 372.9 376 54.3
SalBow1G1317 Salvia bowleyana HOM05D005158 ORTHO05D005510 7.5e-99 365.2 333 55.6
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.8e-97 360.5 368 56.2
Peaxi162Scf00159g01112 Petunia axillaris HOM05D005158 ORTHO05D005510 3.3e-94 349.7 248 67.3
Dinv14415 Davidia involucrata HOM05D005158 ORTHO05D005510 8.3e-82 308.5 381 49.3
Prupe.5G232900 Prunus persica HOM05D005158 ORTHO05D005510 1.3e-79 301.2 236 63.6
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 1.7e-79 300.8 311 54.3
Solyc05g017900.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 7.5e-75 285.4 302 54.3
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 4.9e-74 282.7 344 43.9
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.4e-68 264.6 272 51.8
HPP92_016287 Vanilla planifolia HOM05D005158 ORTHO05D005510 1.8e-68 264.2 236 58.1
Thecc.02G284700 Theobroma cacao HOM05D005158 ORTHO05D005510 3.1e-68 263.5 207 63.3
Potri.008G130950 Populus trichocarpa HOM05D005158 ORTHO05D005510 2.9e-66 256.9 282 53.2
Zm00001eb054470 Zea mays HOM05D005158 ORTHO05D005510 4.7e-61 239.6 202 58.9
Oeu003374.1 Olea europaea HOM05D005158 ORTHO05D005510 1.4e-57 228.0 166 68.1
Oeu014055.2 Olea europaea HOM05D005158 ORTHO05D005510 4.2e-57 226.5 175 66.3
FAN07G0555 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.2e-56 224.9 225 58.7
AagrBONN_evm.TU.Sc2ySwM_344.3657 Anthoceros agrestis HOM05D005158 ORTHO05D005510 2.8e-53 213.8 239 44.4
PRCOL_00003969 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 7.6e-51 205.7 291 41.6
SEGI_17459 Sequoiadendron giganteum HOM05D005158 ORTHO05D005510 1.1e-49 201.8 186 53.2
Cpa.g.sc570.2 Carica papaya HOM05D005158 ORTHO05D005510 2.5e-46 190.7 121 76.9
Manes.06G007150 Manihot esculenta HOM05D005158 ORTHO05D005510 1.1e-38 165.2 195 49.7
HPP92_027195 Vanilla planifolia HOM05D005158 ORTHO05D005510 4.8e-37 159.8 189 48.7
HanXRQChr08g0212291 Helianthus annuus HOM05D005158 ORTHO05D005510 3.4e-35 153.7 111 64.0
Zm00001eb280420 Zea mays HOM05D005158 ORTHO05D005510 5.8e-35 152.9 146 54.8
Gohir.D02G122150 Gossypium hirsutum HOM05D005158 ORTHO05D005510 2.2e-29 134.4 193 44.0
Duzib068G0898 Durio zibethinus HOM05D005158 ORTHO05D005510 8.2e-29 132.5 226 38.9
TAR622G0559 Trochodendron aralioides HOM05D005158 ORTHO05D005510 3.4e-27 127.1 224 38.4
DCAR_007307 Daucus carota HOM05D005158 ORTHO05D005510 1.0e-26 125.6 100 65.0
Peaxi162Scf00159g01110 Petunia axillaris HOM05D005158 ORTHO05D005510 1.3e-26 125.2 96 69.8
MD16G1025900 Malus domestica HOM05D005158 ORTHO05D005510 5.0e-26 123.2 78 78.2
Os06g0269200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 1.1e-25 122.1 82 68.3
Gorai.005G131900 Gossypium raimondii HOM05D005158 ORTHO05D005510 4.2e-25 120.2 139 47.5
Solyc05g017940.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 3.6e-24 117.1 97 60.8
PGR044G0956 Punica granatum HOM05D005158 ORTHO05D005510 6.1e-24 116.3 193 39.4
Thecc.02G284900 Theobroma cacao HOM05D005158 ORTHO05D005510 7.9e-24 115.9 189 41.8
Prupe.5G232800 Prunus persica HOM05D005158 ORTHO05D005510 1.0e-23 115.5 207 39.6
PRCOL_00000423 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 1.4e-23 115.2 216 35.2
AagrBONN_evm.TU.Sc2ySwM_368.719 Anthoceros agrestis HOM05D005158 ORTHO05D005510 9.7e-22 109.0 312 28.5
C06p44960 Brassica napus HOM05D005158 ORTHO05D005510 3.7e-21 107.1 105 57.1
Pp3c9_21990 Physcomitrium patens HOM05D005158 ORTHO05D005510 6.9e-20 102.8 328 28.7
HanXRQChr08g0212271 Helianthus annuus HOM05D005158 ORTHO05D005510 1.2e-19 102.1 63 77.8
MCO07G148 Micromonas commoda HOM05D005158 ORTHO05D005510 3.4e-19 100.5 175 34.9
AagrBONN_evm.TU.Sc2ySwM_117.460 Anthoceros agrestis HOM05D005158 ORTHO05D005510 6.1e-16 89.7 245 30.6
Cpa.g.sc130.33 Carica papaya HOM05D005158 ORTHO05D005510 5.1e-15 86.7 71 57.7
Mapoly0003s0267 Marchantia polymorpha HOM05D032652 ORTHO05D005510 5.7e-14 83.2 334 26.9
SMO263G0001 Selaginella moellendorffii HOM05D032652 ORTHO05D005510 1.7e-13 81.6 272 26.8
SMO118G0092 Selaginella moellendorffii HOM05D032652 ORTHO05D005510 2.8e-13 80.9 270 25.6
Manes.09G075257 Manihot esculenta HOM05D005158 ORTHO05D005510 8.2e-13 79.3 98 49.0
MCO07G404 Micromonas commoda HOM05D005158 ORTHO05D005510 4.1e-12 77.0 282 24.5
VMungo1215G0171 Vigna mungo HOM05D005158 ORTHO05D005510 1.3e-10 72.0 50 80.0
RcHm_v2.0_Chr7g0199801 Rosa chinensis HOM05D005158 ORTHO05D005510 2.9e-10 70.9 56 57.1
Pp3c15_24210 Physcomitrium patens HOM05D005158 ORTHO05D005510 8.5e-10 69.3 251 25.1
CBR_g49491 Chara braunii HOM05D005158 ORTHO05D005510 1.2e-08 65.5 222 27.0
MCO04G437 Micromonas commoda HOM05D005158 ORTHO05D005510 4.7e-08 63.5 313 24.6
Aqoxy2G01678 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 8.0e-08 62.8 62 41.9
MCO15G091 Micromonas commoda HOM05D036318 ORTHO05D005510 1.4e-07 62.0 252 27.0
BcaC08g46535 Brassica carinata HOM05D005158 ORTHO05D005510 1.1e-06 58.9 118 36.4


User provided reference genes

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