Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G026400 Phaseolus vulgaris HOM05D000874 ORTHO05D001049 2.3e-46 188.3 84 100.0
VMungo1383G3000 Vigna mungo HOM05D000874 ORTHO05D001049 8.9e-14 80.1 45 75.6
EL10Ac7g17013 Beta vulgaris HOM05D000874 ORTHO05D001049 7.6e-13 77.0 43 72.1
VMungo1383G1800 Vigna mungo HOM05D000874 ORTHO05D001049 7.6e-13 77.0 45 73.3
Lsat_1_v5_gn_1_50520 Lactuca sativa HOM05D000874 ORTHO05D001049 1.4e-11 72.8 52 57.7
EL10Ac7g17010 Beta vulgaris HOM05D000874 ORTHO05D001049 1.9e-11 72.4 49 61.2
Cfa016522 Carpinus fangiana HOM05D000874 ORTHO05D001049 3.2e-11 71.6 45 71.1
Medtr7g103410 Medicago truncatula HOM05D000874 ORTHO05D001049 5.4e-11 70.9 45 66.7
Haze_19523 Corylus avellana HOM05D000874 ORTHO05D001049 7.1e-11 70.5 44 65.9
Glyma.19G190500 Glycine max HOM05D000874 ORTHO05D001049 7.1e-11 70.5 63 50.8
Atru.chr8.1658 Acer truncatum HOM05D000874 ORTHO05D001049 9.2e-11 70.1 42 69.0
Dinv19816 Davidia involucrata HOM05D000874 ORTHO05D001049 9.2e-11 70.1 42 71.4
Medtr7g103540 Medicago truncatula HOM05D000874 ORTHO05D001049 2.7e-10 68.6 44 65.9
TAR369G1004 Trochodendron aralioides HOM05D000874 ORTHO05D001049 3.5e-10 68.2 42 66.7
Atru.chr8.1657 Acer truncatum HOM05D000874 ORTHO05D001049 4.6e-10 67.8 42 69.0
Medtr7g103550 Medicago truncatula HOM05D000874 ORTHO05D001049 4.6e-10 67.8 42 64.3
Potri.010G244400 Populus trichocarpa HOM05D000874 ORTHO05D001049 4.6e-10 67.8 42 61.9
CiPaw.10G004500 Carya illinoinensis HOM05D000874 ORTHO05D001049 6.0e-10 67.4 52 51.9
COL.COLO4_29833 Corchorus olitorius HOM05D000874 ORTHO05D001049 6.0e-10 67.4 63 50.8
Medtr7g103560 Medicago truncatula HOM05D000874 ORTHO05D001049 6.0e-10 67.4 43 62.8
Medtr7g103570 Medicago truncatula HOM05D000874 ORTHO05D001049 6.0e-10 67.4 43 65.1
RcHm_v2.0_Chr3g0472311 Rosa chinensis HOM05D000874 ORTHO05D001049 7.8e-10 67.0 42 66.7
Nitab4.5_0001922g0080 Nicotiana tabacum HOM05D000874 ORTHO05D001049 1.0e-09 66.6 42 59.5
Cfa016521 Carpinus fangiana HOM05D000874 ORTHO05D001049 1.7e-09 65.9 42 64.3
HanXRQChr01g0028371 Helianthus annuus HOM05D000874 ORTHO05D001049 1.7e-09 65.9 52 50.0
MD14G1013900 Malus domestica HOM05D000874 ORTHO05D001049 1.7e-09 65.9 43 62.8
QL07p040759 Quercus lobata HOM05D000874 ORTHO05D001049 1.7e-09 65.9 42 64.3
Lalb_Chr20g0112271 Lupinus albus HOM05D000874 ORTHO05D001049 2.3e-09 65.5 58 46.6
Potri.010G244200 Populus trichocarpa HOM05D000874 ORTHO05D001049 2.3e-09 65.5 42 64.3
vmacro07377 Vaccinium macrocarpon HOM05D000874 ORTHO05D001049 2.3e-09 65.5 65 46.2
Lsat_1_v5_gn_1_50480 Lactuca sativa HOM05D000874 ORTHO05D001049 3.0e-09 65.1 52 51.9
Nn6g35077 Nelumbo nucifera HOM05D000874 ORTHO05D001049 3.0e-09 65.1 63 47.6
Nitab4.5_0010125g0010 Nicotiana tabacum HOM05D000874 ORTHO05D001049 3.0e-09 65.1 42 59.5
Rhsim03G0082500 Rhododendron simsii HOM05D000874 ORTHO05D001049 3.0e-09 65.1 73 43.8
Sabra10G0190900 Salix brachista HOM05D000874 ORTHO05D001049 3.0e-09 65.1 42 61.9
TPR.G7022 Trifolium pratense HOM05D000874 ORTHO05D001049 3.9e-09 64.7 43 62.8
TAR369G0064 Trochodendron aralioides HOM05D000874 ORTHO05D001049 5.1e-09 64.3 42 61.9
Lsat_1_v5_gn_1_50460 Lactuca sativa HOM05D000874 ORTHO05D001049 6.6e-09 63.9 44 59.1
Prupe.7G119400 Prunus persica HOM05D000874 ORTHO05D001049 6.6e-09 63.9 42 64.3
THA.LOC104823469 Tarenaya hassleriana HOM05D000874 ORTHO05D001049 6.6e-09 63.9 43 58.1
AL4G32720 Arabidopsis lyrata HOM05D000874 ORTHO05D001049 8.7e-09 63.5 51 47.1
Haze_19522 Corylus avellana HOM05D000874 ORTHO05D001049 8.7e-09 63.5 42 59.5
GSVIVG01033766001 Vitis vinifera HOM05D000874 ORTHO05D001049 8.7e-09 63.5 42 61.9
Atru.chr8.1656 Acer truncatum HOM05D000874 ORTHO05D001049 1.1e-08 63.2 42 64.3
AT2G36550 Arabidopsis thaliana HOM05D000874 ORTHO05D001049 1.1e-08 63.2 51 47.1
Cpa.g.sc5.93 Carica papaya HOM05D000874 ORTHO05D001049 1.1e-08 63.2 53 52.8
FAN05G1754 Fragaria x ananassa HOM05D000874 ORTHO05D001049 1.1e-08 63.2 47 57.4
FAN05G3374 Fragaria x ananassa HOM05D000874 ORTHO05D001049 1.1e-08 63.2 47 57.4
THA.LOC104823468 Tarenaya hassleriana HOM05D000874 ORTHO05D001049 1.1e-08 63.2 43 58.1
TAR369G0865 Trochodendron aralioides HOM05D000874 ORTHO05D001049 1.1e-08 63.2 42 61.9
Actinidia11325 Actinidia chinensis HOM05D000874 ORTHO05D001049 1.5e-08 62.8 59 45.8
Migut.L01749 Erythranthe guttata HOM05D000874 ORTHO05D001049 1.5e-08 62.8 52 53.8
Peaxi162Scf00412g00713 Petunia axillaris HOM05D000874 ORTHO05D001049 1.5e-08 62.8 52 48.1
Sp4g18830 Schrenkiella parvula HOM05D000874 ORTHO05D001049 1.5e-08 62.8 51 47.1
AT2G36540 Arabidopsis thaliana HOM05D000874 ORTHO05D001049 1.9e-08 62.4 51 47.1
CARHR130830 Cardamine hirsuta HOM05D000874 ORTHO05D001049 1.9e-08 62.4 47 51.1
DCAR_013957 Daucus carota HOM05D000874 ORTHO05D001049 1.9e-08 62.4 56 48.2
FvH4_6g18041 Fragaria vesca HOM05D000874 ORTHO05D001049 1.9e-08 62.4 42 61.9
Oeu040548.1 Olea europaea HOM05D000874 ORTHO05D001049 2.5e-08 62.0 56 44.6
RcHm_v2.0_Chr3g0472301 Rosa chinensis HOM05D000874 ORTHO05D001049 2.5e-08 62.0 43 62.8
Atru.chr3.2653 Acer truncatum HOM05D000874 ORTHO05D001049 3.3e-08 61.6 42 64.3
Ciclev10013817m.g Citrus clementina HOM05D000874 ORTHO05D001049 3.3e-08 61.6 52 53.8
HanXRQChr01g0028381 Helianthus annuus HOM05D000874 ORTHO05D001049 3.3e-08 61.6 52 48.1
SGA_v2.0_scaffold184G39919 Striga asiatica HOM05D000874 ORTHO05D001049 4.3e-08 61.2 55 45.5
FvH4_6g18040 Fragaria vesca HOM05D000874 ORTHO05D001049 5.6e-08 60.8 43 60.5
FAN02G0261 Fragaria x ananassa HOM05D000874 ORTHO05D001049 5.6e-08 60.8 43 58.1
FAN14G4843 Fragaria x ananassa HOM05D000007 ORTHO05D000017 5.6e-08 60.8 43 60.5
Thecc.05G079800 Theobroma cacao HOM05D000874 ORTHO05D001049 5.6e-08 60.8 42 61.9
Carub.0004s1834 Capsella rubella HOM05D000874 ORTHO05D001049 7.3e-08 60.5 43 51.2
FAN05G0832 Fragaria x ananassa HOM05D000874 ORTHO05D001049 7.3e-08 60.5 54 48.1
FAN05G3328 Fragaria x ananassa HOM05D000874 ORTHO05D001049 7.3e-08 60.5 54 48.1
FAN05G3737 Fragaria x ananassa HOM05D000874 ORTHO05D001049 7.3e-08 60.5 54 48.1
Lj2A127G88 Lonicera japonica HOM05D000874 ORTHO05D001049 7.3e-08 60.5 42 54.8
Oeu040547.1 Olea europaea HOM05D000874 ORTHO05D001049 7.3e-08 60.5 53 47.2
FAN02G2438 Fragaria x ananassa HOM05D000874 ORTHO05D001049 9.6e-08 60.1 47 55.3
BolC4t22804H Brassica oleracea HOM05D000874 ORTHO05D001049 1.2e-07 59.7 43 53.5
FAN14G2137 Fragaria x ananassa HOM05D000874 ORTHO05D001049 1.2e-07 59.7 41 61.0
Rhsim03G0082400 Rhododendron simsii HOM05D000874 ORTHO05D001049 1.2e-07 59.7 39 61.5
CAN.G824.35 Capsicum annuum HOM05D000004 ORTHO05D000002 1.6e-07 59.3 42 54.8
CAN.G824.44 Capsicum annuum HOM05D000874 ORTHO05D001049 1.6e-07 59.3 42 52.4
ECA248G1348 Erigeron canadensis HOM05D000874 ORTHO05D001049 1.6e-07 59.3 53 45.3
BcaB02g09347 Brassica carinata HOM05D000874 ORTHO05D001049 2.1e-07 58.9 56 42.9
BraA05t19883Z Brassica rapa HOM05D000874 ORTHO05D001049 2.1e-07 58.9 43 53.5
Carub.0004s1835 Capsella rubella HOM05D000874 ORTHO05D001049 2.1e-07 58.9 51 45.1
Cc06_g05100 Coffea canephora HOM05D000874 ORTHO05D001049 2.1e-07 58.9 42 54.8
BcaB06g28953 Brassica carinata HOM05D000874 ORTHO05D001049 2.8e-07 58.5 51 45.1
A04p28040 Brassica napus HOM05D000874 ORTHO05D001049 2.8e-07 58.5 51 45.1
C04p65450 Brassica napus HOM05D000874 ORTHO05D001049 2.8e-07 58.5 51 45.1
BraA04t18291Z Brassica rapa HOM05D000874 ORTHO05D001049 2.8e-07 58.5 51 45.1
MD14G1014100 Malus domestica HOM05D000874 ORTHO05D001049 2.8e-07 58.5 43 55.8
TAR369G0434 Trochodendron aralioides HOM05D000874 ORTHO05D001049 2.8e-07 58.5 42 57.1
BcaC02g11772 Brassica carinata HOM05D000874 ORTHO05D001049 3.6e-07 58.2 43 51.2
C04p11550 Brassica napus HOM05D000874 ORTHO05D001049 3.6e-07 58.2 43 51.2
AUR62033594 Chenopodium quinoa HOM05D000874 ORTHO05D001049 3.6e-07 58.2 45 57.8
ECA248G2582 Erigeron canadensis HOM05D000874 ORTHO05D001049 4.7e-07 57.8 42 54.8
Thhalv10027102m.g Eutrema salsugineum HOM05D000874 ORTHO05D001049 4.7e-07 57.8 51 43.1
TPR.G7021 Trifolium pratense HOM05D000874 ORTHO05D001049 4.7e-07 57.8 43 60.5
Zm00001eb118130 Zea mays HOM05D000874 ORTHO05D001049 4.7e-07 57.8 43 60.5
AUR62037887 Chenopodium quinoa HOM05D000874 ORTHO05D001049 6.2e-07 57.4 45 57.8
FAN07G1437 Fragaria x ananassa HOM05D000874 ORTHO05D001049 6.2e-07 57.4 52 46.2
HanXRQChr01g0028361 Helianthus annuus HOM05D000874 ORTHO05D001049 6.2e-07 57.4 51 43.1
COL.COLO4_24323 Corchorus olitorius HOM05D000874 ORTHO05D001049 8.1e-07 57.0 42 52.4
Duzib205G1421 Durio zibethinus HOM05D000874 ORTHO05D001049 8.1e-07 57.0 59 42.4
FAN02G4103 Fragaria x ananassa HOM05D000874 ORTHO05D001049 8.1e-07 57.0 43 55.8
TPR.G35038 Trifolium pratense HOM05D000874 ORTHO05D001049 8.1e-07 57.0 43 60.5
FvH4_6g17650 Fragaria vesca HOM05D000874 ORTHO05D001049 1.1e-06 56.6 43 53.5
FAN09G2215 Fragaria x ananassa HOM05D000874 ORTHO05D001049 1.1e-06 56.6 43 53.5
FAN14G4813 Fragaria x ananassa HOM05D000874 ORTHO05D001049 1.1e-06 56.6 43 53.5
HanXRQChr11g0351071 Helianthus annuus HOM05D000874 ORTHO05D001049 1.1e-06 56.6 42 50.0
Solyc09g008960.2 Solanum lycopersicum HOM05D000874 ORTHO05D001049 1.1e-06 56.6 58 41.4
Cpa.g.sc5.90 Carica papaya HOM05D000874 ORTHO05D001049 1.4e-06 56.2 53 45.3
Cpa.g.sc5.91 Carica papaya HOM05D000874 ORTHO05D001049 1.4e-06 56.2 47 57.4
ClCG04G009700 Citrullus lanatus HOM05D000874 ORTHO05D001049 1.4e-06 56.2 39 53.8
Psat3g036280 Pisum sativum HOM05D000874 ORTHO05D001049 1.4e-06 56.2 43 55.8
TPR.G5173 Trifolium pratense HOM05D000874 ORTHO05D001049 1.4e-06 56.2 47 59.6
BcaC02g07585 Brassica carinata HOM05D000874 ORTHO05D001049 1.8e-06 55.8 50 44.0
Cfa019352 Carpinus fangiana HOM05D000874 ORTHO05D001049 1.8e-06 55.8 42 57.1
MBI01_g14106_MAGBIO Magnolia biondii HOM05D000874 ORTHO05D001049 1.8e-06 55.8 63 41.3
ECA232G1458 Erigeron canadensis HOM05D000874 ORTHO05D001049 2.4e-06 55.5 42 54.8
Os03g0755800 Oryza sativa ssp. japonica HOM05D000874 ORTHO05D001049 2.4e-06 55.5 65 40.0
TWI53G1141 Tripterygium wilfordii HOM05D000874 ORTHO05D001049 2.4e-06 55.5 38 57.9
Nn3g17472 Nelumbo nucifera HOM05D000874 ORTHO05D001049 3.1e-06 55.1 42 54.8
PSO063G3153 Papaver somniferum HOM05D000874 ORTHO05D001049 3.1e-06 55.1 55 47.3
PGSC0003DMG402002685 Solanum tuberosum HOM05D000874 ORTHO05D001049 3.1e-06 55.1 43 46.5
CDE10G0367 Ceratophyllum demersum HOM05D000874 ORTHO05D001049 4.0e-06 54.7 42 50.0
MD14G1014000 Malus domestica HOM05D000874 ORTHO05D001049 4.0e-06 54.7 43 51.2
Sed0024499 Sechium edule HOM05D000874 ORTHO05D001049 4.0e-06 54.7 39 53.8
arahy.Tifrunner.gnm1.ann1.J7EB43 Arachis hypogaea HOM05D000874 ORTHO05D001049 5.2e-06 54.3 39 53.8
FvH4_6g17680 Fragaria vesca HOM05D000874 ORTHO05D001049 5.2e-06 54.3 45 51.1
HanXRQChr11g0351081 Helianthus annuus HOM05D000874 ORTHO05D001049 5.2e-06 54.3 42 47.6
HanXRQChr16g0522161 Helianthus annuus HOM05D000874 ORTHO05D001049 5.2e-06 54.3 42 54.8
TWI53G0240 Tripterygium wilfordii HOM05D000874 ORTHO05D001049 5.2e-06 54.3 38 57.9
Glyma.04G160900 Glycine max HOM05D000874 ORTHO05D001049 9.0e-06 53.5 70 37.1
Manes.09G060716 Manihot esculenta HOM05D000874 ORTHO05D001049 9.0e-06 53.5 54 48.1
Oeu023851.2 Olea europaea HOM05D000874 ORTHO05D001049 9.0e-06 53.5 56 41.1
Sopen09g003720 Solanum pennellii HOM05D000874 ORTHO05D001049 9.0e-06 53.5 58 39.7
vmacro07376 Vaccinium macrocarpon HOM05D000874 ORTHO05D001049 9.0e-06 53.5 39 53.8


User provided reference genes

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