Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G022800 Phaseolus vulgaris HOM05D007719 ORTHO05D009782 1.4e-229 799.3 402 100.0
VMungo1215G2618 Vigna mungo HOM05D007719 ORTHO05D009782 2.0e-212 742.3 402 93.3
Glyma.09G119300 Glycine max HOM05D007719 ORTHO05D009782 6.0e-201 704.1 407 88.5
Medtr1g030640 Medicago truncatula HOM05D007719 ORTHO05D009782 7.4e-191 670.6 399 83.2
Psat0s3407g0080 Pisum sativum HOM05D007719 ORTHO05D009782 6.9e-189 664.1 399 82.0
TPR.G36961 Trifolium pratense HOM05D007719 ORTHO05D009782 1.1e-186 656.8 402 81.1
Ca_25710_v3 Cicer arietinum L. HOM05D007719 ORTHO05D009782 4.2e-186 654.8 404 83.2
Lalb_Chr17g0338681 Lupinus albus HOM05D007719 ORTHO05D009782 9.4e-186 653.7 398 82.7
Lj2g0007830 Lotus japonicus HOM05D007719 ORTHO05D009782 5.1e-184 647.9 368 87.0
arahy.Tifrunner.gnm1.ann1.Y8VIVB Arachis hypogaea HOM05D007719 ORTHO05D009782 1.1e-175 620.2 388 79.9
Gohir.A12G150300 Gossypium hirsutum HOM05D007719 ORTHO05D009782 2.0e-172 609.4 379 79.2
Gorai.008G166400 Gossypium raimondii HOM05D007719 ORTHO05D009782 2.0e-172 609.4 379 78.9
Dinv05161 Davidia involucrata HOM05D007719 ORTHO05D009782 1.0e-171 607.1 376 79.8
QL01p001957 Quercus lobata HOM05D007719 ORTHO05D009782 1.7e-171 606.3 382 78.8
CSS0046068 Camellia sinensis var. sinensis HOM05D007719 ORTHO05D009782 2.1e-169 599.4 376 78.2
MD16G1029600 Malus domestica HOM05D007719 ORTHO05D009782 2.3e-168 595.9 384 78.6
CiPaw.05G248600 Carya illinoinensis HOM05D007719 ORTHO05D009782 3.0e-168 595.5 405 75.6
COL.COLO4_20469 Corchorus olitorius HOM05D007719 ORTHO05D009782 3.0e-168 595.5 421 72.2
Atru.chr11.428 Acer truncatum HOM05D007719 ORTHO05D009782 5.2e-168 594.7 380 77.4
TWI75G0056 Tripterygium wilfordii HOM05D007719 ORTHO05D009782 2.0e-167 592.8 390 75.9
TAR629G1042 Trochodendron aralioides HOM05D007719 ORTHO05D009782 2.6e-167 592.4 376 77.4
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 7.5e-167 590.9 381 75.6
FAN07G1524 Fragaria x ananassa HOM05D007719 ORTHO05D009782 4.1e-165 585.1 395 73.9
FAN12G3181 Fragaria x ananassa HOM05D007719 ORTHO05D009782 5.3e-165 584.7 404 73.0
PGR119G0428 Punica granatum HOM05D007719 ORTHO05D009782 9.1e-165 583.9 386 75.1
Potri.010G114100 Populus trichocarpa HOM05D007719 ORTHO05D009782 1.6e-164 583.2 401 73.6
Hund24987 Selenicereus undatus HOM05D007719 ORTHO05D009782 2.0e-164 582.8 384 75.3
FvH4_4g32280 Fragaria vesca HOM05D007719 ORTHO05D009782 3.5e-164 582.0 401 73.6
arahy.Tifrunner.gnm1.ann1.L198GP Arachis hypogaea HOM05D007719 ORTHO05D009782 4.5e-164 581.6 388 76.3
vmacro10633 Vaccinium macrocarpon HOM05D007719 ORTHO05D009782 1.0e-163 580.5 376 76.3
ECA234G0976 Erigeron canadensis HOM05D007719 ORTHO05D009782 1.3e-163 580.1 376 76.3
Rhsim09G0099000 Rhododendron simsii HOM05D007719 ORTHO05D009782 1.3e-163 580.1 403 73.9
CsaV3_5G028560 Cucumis sativus L. HOM05D007719 ORTHO05D009782 2.9e-163 578.9 392 73.0
FAN22G2057 Fragaria x ananassa HOM05D007719 ORTHO05D009782 5.0e-163 578.2 376 76.1
Manes.15G114900 Manihot esculenta HOM05D007719 ORTHO05D009782 5.0e-163 578.2 357 79.3
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 5.0e-163 578.2 404 71.5
Actinidia36679 Actinidia chinensis HOM05D007719 ORTHO05D009782 1.5e-162 576.6 376 76.3
EL10Ac3g06304 Beta vulgaris HOM05D007719 ORTHO05D009782 2.5e-162 575.9 376 75.0
RcHm_v2.0_Chr4g0441071 Rosa chinensis HOM05D007719 ORTHO05D009782 7.2e-162 574.3 379 74.9
Eucgr.G02196 Eucalyptus grandis HOM05D007719 ORTHO05D009782 2.7e-161 572.4 379 76.3
Sabra10G0084100 Salix brachista HOM05D007719 ORTHO05D009782 6.1e-161 571.2 421 68.6
AUR62002606 Chenopodium quinoa HOM05D007719 ORTHO05D009782 4.4e-159 565.1 384 72.9
FAN17G2178 Fragaria x ananassa HOM05D007719 ORTHO05D009782 5.7e-159 564.7 355 77.7
Lsat_1_v5_gn_4_14941 Lactuca sativa HOM05D007719 ORTHO05D009782 1.3e-158 563.5 367 75.5
AUR62030024 Chenopodium quinoa HOM05D007719 ORTHO05D009782 4.8e-158 561.6 374 74.6
Sc11g0004120 Simmondsia chinensis HOM05D007719 ORTHO05D009782 1.1e-157 560.5 381 73.2
HanXRQChr17g0566951 Helianthus annuus HOM05D007719 ORTHO05D009782 1.8e-157 559.7 373 74.0
Cc11_g08840 Coffea canephora HOM05D007719 ORTHO05D009782 2.7e-156 555.8 375 73.1
CAN.G1334.8 Capsicum annuum HOM05D007719 ORTHO05D009782 2.2e-155 552.7 395 72.4
Ah.07g204110 Amaranthus hybridus HOM05D007719 ORTHO05D009782 3.8e-155 552.0 392 71.4
DCAR_030215 Daucus carota HOM05D007719 ORTHO05D009782 5.0e-155 551.6 357 76.2
MSTRG.23215 Avicennia marina HOM05D007719 ORTHO05D009782 2.5e-154 549.3 389 72.2
Sopen05g004110 Solanum pennellii HOM05D007719 ORTHO05D009782 2.5e-154 549.3 375 74.4
Solyc05g008270.3 Solanum lycopersicum HOM05D007719 ORTHO05D009782 4.7e-153 545.0 403 70.7
ATR0686G226 Amborella trichopoda HOM05D007719 ORTHO05D009782 8.0e-153 544.3 382 70.9
Oeu034423.3 Olea europaea HOM05D007719 ORTHO05D009782 8.8e-152 540.8 390 70.0
Nitab4.5_0004776g0060 Nicotiana tabacum HOM05D007719 ORTHO05D009782 2.0e-151 539.7 350 76.3
SalBow5G1767 Salvia bowleyana HOM05D007719 ORTHO05D009782 9.8e-151 537.3 361 75.3
PGSC0003DMG400030550 Solanum tuberosum HOM05D007719 ORTHO05D009782 2.8e-150 535.8 414 68.4
HPP92_021852 Vanilla planifolia HOM05D007719 ORTHO05D009782 6.3e-150 534.6 381 69.6
Os01g0127400 Oryza sativa ssp. japonica HOM05D007719 ORTHO05D009782 4.1e-149 531.9 389 69.7
Prupe.1G323300 Prunus persica HOM05D007719 ORTHO05D009782 1.2e-148 530.4 359 77.4
Migut.O00274 Erythranthe guttata HOM05D007719 ORTHO05D009782 1.7e-147 526.6 383 71.0
SEGI_18275 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 8.6e-147 524.2 355 72.4
SGA_v2.0_scaffold25G10737 Striga asiatica HOM05D007719 ORTHO05D009782 1.9e-146 523.1 423 67.4
unitig_61.g26194 Utricularia gibba HOM05D007719 ORTHO05D009782 4.3e-146 521.9 356 73.3
Pp3c1_3200 Physcomitrium patens HOM05D007719 ORTHO05D009782 1.2e-140 503.8 352 69.3
Peaxi162Scf00205g00122 Petunia axillaris HOM05D007719 ORTHO05D009782 3.9e-139 498.8 402 65.7
Mapoly0070s0076 Marchantia polymorpha HOM05D007719 ORTHO05D009782 3.3e-138 495.7 353 66.6
MELO3C005317.2 Cucumis melo HOM05D007719 ORTHO05D009782 6.2e-137 491.5 401 63.8
GSVIVG01011772001 Vitis vinifera HOM05D007719 ORTHO05D009782 7.8e-132 474.6 300 80.0
SMO236G0033 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 1.5e-130 470.3 375 62.4
SMO236G0110 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 1.5e-130 470.3 375 62.4
Actinidia15254 Actinidia chinensis HOM05D007719 ORTHO05D009782 1.6e-129 466.8 375 65.9
CDE04G3405 Ceratophyllum demersum HOM05D007719 ORTHO05D009782 2.6e-127 459.5 391 63.4
Zm00001eb125300 Zea mays HOM05D007719 ORTHO05D009782 4.0e-120 435.6 388 59.8
Gohir.D12G153900 Gossypium hirsutum HOM05D007719 ORTHO05D009782 1.5e-111 407.1 247 80.6
Thecc.02G280000 Theobroma cacao HOM05D007719 ORTHO05D009782 2.2e-110 403.3 264 76.1
Cpa.g.sc65.124 Carica papaya HOM05D007719 ORTHO05D009782 5.6e-106 388.7 252 74.6
SMO187G0003 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 7.3e-106 388.3 375 54.1
Haze_11019 Corylus avellana HOM05D007719 ORTHO05D009782 2.4e-101 373.2 289 69.6
AagrBONN_evm.TU.Sc2ySwM_228.3777 Anthoceros agrestis HOM05D007719 ORTHO05D009782 1.3e-91 340.9 273 63.4
Cfa008596 Carpinus fangiana HOM05D007719 ORTHO05D009782 8.1e-89 331.6 205 81.0
SEGI_23314 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 1.2e-84 317.8 231 68.4
Nn4g24120 Nelumbo nucifera HOM05D007719 ORTHO05D009782 2.4e-80 303.5 174 83.3
CBR_g12440 Chara braunii HOM05D007719 ORTHO05D009782 1.2e-76 291.2 351 44.7
Duzib268G0649 Durio zibethinus HOM05D007719 ORTHO05D009782 6.7e-67 258.8 217 61.8
GSVIVG01011775001 Vitis vinifera HOM05D007719 ORTHO05D009782 2.5e-61 240.4 145 82.8
Cfa008597 Carpinus fangiana HOM05D007719 ORTHO05D009782 5.7e-50 202.6 135 73.3
Haze_11018 Corylus avellana HOM05D007719 ORTHO05D009782 3.5e-47 193.4 124 74.2
TPR.G29132 Trifolium pratense HOM05D007719 ORTHO05D009782 2.3e-11 74.3 77 54.5


User provided reference genes

Program Settings