Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G022200 Phaseolus vulgaris HOM05D006947 ORTHO05D008818 0.0e+00 1552.0 822 100.0
VMungo1215G1110 Vigna mungo HOM05D006947 ORTHO05D008818 0.0e+00 1331.6 830 87.0
Glyma.09G120400 Glycine max HOM05D006947 ORTHO05D008818 0.0e+00 1296.6 834 84.1
Lalb_Chr10g0096001 Lupinus albus HOM05D006947 ORTHO05D008818 0.0e+00 1144.8 847 73.3
Ca_12591_v3 Cicer arietinum L. HOM05D006947 ORTHO05D008818 7.8e-296 1020.4 835 67.9
TPR.G36974 Trifolium pratense HOM05D006947 ORTHO05D008818 7.8e-288 993.8 846 66.2
arahy.Tifrunner.gnm1.ann1.8B134P Arachis hypogaea HOM05D006947 ORTHO05D008818 1.0e-287 993.4 807 67.7
arahy.Tifrunner.gnm1.ann1.573L1D Arachis hypogaea HOM05D006947 ORTHO05D008818 2.2e-282 975.7 747 70.8
Cfa014981 Carpinus fangiana HOM05D006947 ORTHO05D008818 1.1e-278 963.4 803 65.5
Haze_10941 Corylus avellana HOM05D006947 ORTHO05D008818 1.9e-273 946.0 861 61.6
CiPaw.06G048400 Carya illinoinensis HOM05D006947 ORTHO05D008818 3.6e-269 931.8 802 63.6
Dinv28045 Davidia involucrata HOM05D006947 ORTHO05D008818 3.6e-269 931.8 807 64.1
GSVIVG01011706001 Vitis vinifera HOM05D006947 ORTHO05D008818 2.4e-268 929.1 771 65.6
Medtr1g031750 Medicago truncatula HOM05D006947 ORTHO05D008818 3.8e-266 921.8 764 66.9
TAR622G0063 Trochodendron aralioides HOM05D006947 ORTHO05D008818 8.4e-266 920.6 810 62.8
ClCG01G006350 Citrullus lanatus HOM05D006947 ORTHO05D008818 1.1e-265 920.2 788 63.1
Gorai.002G176700 Gossypium raimondii HOM05D006947 ORTHO05D008818 2.4e-265 919.1 803 62.4
TWI74G1199 Tripterygium wilfordii HOM05D006947 ORTHO05D008818 9.3e-265 917.1 772 64.6
RcHm_v2.0_Chr4g0443581 Rosa chinensis HOM05D006947 ORTHO05D008818 4.3e-262 908.3 848 59.8
MELO3C005295.2 Cucumis melo HOM05D006947 ORTHO05D008818 6.2e-261 904.4 818 60.9
Manes.17G080500 Manihot esculenta HOM05D006947 ORTHO05D008818 1.4e-260 903.3 770 64.0
Ciclev10014242m.g Citrus clementina HOM05D006947 ORTHO05D008818 6.9e-260 901.0 796 62.7
MD16G1022800 Malus domestica HOM05D006947 ORTHO05D008818 9.0e-260 900.6 830 61.2
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 3.4e-259 898.7 803 62.3
Duzib251G0407 Durio zibethinus HOM05D006947 ORTHO05D008818 3.4e-259 898.7 802 62.6
FAN07G0937 Fragaria x ananassa HOM05D006947 ORTHO05D008818 9.9e-259 897.1 811 60.9
Gohir.D01G143300 Gossypium hirsutum HOM05D006947 ORTHO05D008818 8.4e-258 894.0 748 64.3
CSS0036590 Camellia sinensis var. sinensis HOM05D006947 ORTHO05D008818 1.6e-256 889.8 813 62.4
Potri.010G110200 Populus trichocarpa HOM05D006947 ORTHO05D008818 1.6e-256 889.8 806 61.5
Potri.008G131900 Populus trichocarpa HOM05D006947 ORTHO05D008818 4.6e-256 888.3 806 60.9
FAN12G3265 Fragaria x ananassa HOM05D006947 ORTHO05D008818 5.1e-255 884.8 879 57.1
CsaV3_5G028330 Cucumis sativus L. HOM05D006947 ORTHO05D008818 9.6e-254 880.6 809 60.4
Eucgr.B02936 Eucalyptus grandis HOM05D006947 ORTHO05D008818 2.8e-253 879.0 837 58.9
Peaxi162Scf00376g00128 Petunia axillaris HOM05D006947 ORTHO05D008818 6.2e-253 877.9 808 61.3
Sed0026926 Sechium edule HOM05D006947 ORTHO05D008818 4.0e-252 875.2 788 60.4
Hma1.2p1_0330F.1_g127400 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 3.8e-250 868.6 774 61.9
Nitab4.5_0000282g0010 Nicotiana tabacum HOM05D006947 ORTHO05D008818 2.5e-249 865.9 782 61.0
Sabra10G0080600 Salix brachista HOM05D006947 ORTHO05D008818 2.5e-249 865.9 772 61.7
QL03p033900 Quercus lobata HOM05D006947 ORTHO05D008818 4.6e-248 861.7 804 59.8
DCAR_026786 Daucus carota HOM05D006947 ORTHO05D008818 5.1e-247 858.2 798 60.9
Cc11_g08260 Coffea canephora HOM05D006947 ORTHO05D008818 1.5e-246 856.7 795 58.4
Atru.chr11.650 Acer truncatum HOM05D006947 ORTHO05D008818 6.5e-242 841.3 766 61.0
HanXRQChr12g0363561 Helianthus annuus HOM05D006947 ORTHO05D008818 1.6e-240 836.6 790 59.5
PGR102G1367 Punica granatum HOM05D006947 ORTHO05D008818 1.6e-240 836.6 789 58.3
Gohir.1Z015600 Gossypium hirsutum HOM05D006947 ORTHO05D008818 2.7e-240 835.9 803 59.7
Glyma.07G166300 Glycine max HOM05D006947 ORTHO05D008818 7.9e-240 834.3 524 84.2
Sc14g0006260 Simmondsia chinensis HOM05D006947 ORTHO05D008818 9.7e-238 827.4 768 58.3
AUR62014176 Chenopodium quinoa HOM05D006947 ORTHO05D008818 8.2e-237 824.3 808 55.9
Sc14g0007020 Simmondsia chinensis HOM05D006947 ORTHO05D008818 1.5e-235 820.1 768 57.9
FvH4_4g34070 Fragaria vesca HOM05D006947 ORTHO05D008818 2.0e-235 819.7 718 62.3
Ah.03g137350 Amaranthus hybridus HOM05D006947 ORTHO05D008818 7.7e-235 817.8 782 57.5
AUR62039529 Chenopodium quinoa HOM05D006947 ORTHO05D008818 2.1e-232 809.7 790 56.2
Sopen05g023090 Solanum pennellii HOM05D006947 ORTHO05D008818 1.0e-231 807.4 757 58.3
ECA233G0254 Erigeron canadensis HOM05D006947 ORTHO05D008818 1.4e-231 807.0 747 59.6
THA.LOC104822169 Tarenaya hassleriana HOM05D006947 ORTHO05D008818 1.4e-231 807.0 806 57.2
Lj6A742T64 Lonicera japonica HOM05D006947 ORTHO05D008818 5.1e-231 805.1 789 58.9
EL10Ac6g14173 Beta vulgaris HOM05D006947 ORTHO05D008818 9.7e-230 800.8 789 56.1
Thhalv10006791m.g Eutrema salsugineum HOM05D006947 ORTHO05D008818 9.7e-230 800.8 776 56.6
Solyc05g026560.3 Solanum lycopersicum HOM05D006947 ORTHO05D008818 1.3e-229 800.4 757 58.1
CANSAT01G1138 Cannabis sativa HOM05D006947 ORTHO05D008818 3.4e-227 792.3 802 56.6
Sp1g20640 Schrenkiella parvula HOM05D006947 ORTHO05D008818 7.7e-227 791.2 775 56.5
MSTRG.907 Avicennia marina HOM05D006947 ORTHO05D008818 1.3e-226 790.4 803 56.4
AL1G36850 Arabidopsis lyrata HOM05D006947 ORTHO05D008818 9.4e-225 784.3 776 56.3
CARHR023620 Cardamine hirsuta HOM05D006947 ORTHO05D008818 9.4e-225 784.3 775 55.7
Carub.0001s2275 Capsella rubella HOM05D006947 ORTHO05D008818 8.8e-223 777.7 777 55.9
AT1G23180 Arabidopsis thaliana HOM05D006947 ORTHO05D008818 2.0e-222 776.5 776 55.4
BcaB03g11927 Brassica carinata HOM05D006947 ORTHO05D008818 4.4e-222 775.4 839 52.9
BolC8t49817H Brassica oleracea HOM05D006947 ORTHO05D008818 2.8e-221 772.7 777 54.8
BcaC07g39188 Brassica carinata HOM05D006947 ORTHO05D008818 3.7e-221 772.3 777 54.8
C08p21780 Brassica napus HOM05D006947 ORTHO05D008818 4.8e-221 771.9 776 54.8
BraA08t34762Z Brassica rapa HOM05D006947 ORTHO05D008818 4.8e-221 771.9 776 55.4
Lj2g0020590 Lotus japonicus HOM05D006947 ORTHO05D008818 2.4e-220 769.6 592 72.1
Gohir.A01G150136 Gossypium hirsutum HOM05D006947 ORTHO05D008818 2.0e-219 766.5 790 57.1
A08p28310 Brassica napus HOM05D006947 ORTHO05D008818 1.0e-218 764.2 773 55.1
Aa31LG7G7190 Aethionema arabicum HOM05D006947 ORTHO05D008818 1.3e-218 763.8 813 53.3
Lsat_1_v5_gn_8_44260 Lactuca sativa HOM05D006947 ORTHO05D008818 2.1e-216 756.5 770 55.2
Hund24964 Selenicereus undatus HOM05D006947 ORTHO05D008818 2.2e-213 746.5 833 51.7
Actinidia36648 Actinidia chinensis HOM05D006947 ORTHO05D008818 4.1e-212 742.3 773 56.4
Migut.L00588 Erythranthe guttata HOM05D006947 ORTHO05D008818 7.0e-212 741.5 774 54.5
ATR0317G087 Amborella trichopoda HOM05D006947 ORTHO05D008818 1.7e-210 736.9 781 54.0
Aqoxy3G04093 Aquilegia oxysepala HOM05D006947 ORTHO05D008818 3.8e-210 735.7 756 55.6
MBI15_g36991_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 1.5e-209 733.8 747 55.8
Rhsim09G0093800 Rhododendron simsii HOM05D006947 ORTHO05D008818 4.0e-207 725.7 839 52.4
Psat6g044440 Pisum sativum HOM05D006947 ORTHO05D008818 7.5e-206 721.5 630 64.1
Thecc.02G287500 Theobroma cacao HOM05D006947 ORTHO05D008818 7.7e-203 711.4 637 61.5
CDE11G0632 Ceratophyllum demersum HOM05D006947 ORTHO05D008818 2.5e-193 679.9 786 49.5
HPP92_024592 Vanilla planifolia HOM05D006947 ORTHO05D008818 1.3e-186 657.5 791 49.4
unitig_52.g17412 Utricularia gibba HOM05D006947 ORTHO05D008818 8.6e-186 654.8 690 53.2
Os01g0524700 Oryza sativa ssp. japonica HOM05D006947 ORTHO05D008818 1.6e-184 650.6 786 48.6
Prupe.1G330100 Prunus persica HOM05D006947 ORTHO05D008818 3.3e-177 626.3 561 60.1
Hma1.2p1_0330F.1_g127410 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 2.5e-169 600.1 481 64.9
vmacro10663 Vaccinium macrocarpon HOM05D006947 ORTHO05D008818 5.1e-162 575.9 813 46.6
MBI15_g41220_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 1.2e-160 571.2 764 47.4
HPP92_024520 Vanilla planifolia HOM05D006947 ORTHO05D008818 8.1e-160 568.5 791 45.3
SalBow8G5231 Salvia bowleyana HOM05D006947 ORTHO05D008818 3.1e-159 566.6 588 54.6
Nitab4.5_0000018g0180 Nicotiana tabacum HOM05D006947 ORTHO05D008818 4.0e-159 566.2 502 60.8
Cpa.g.sc2.239 Carica papaya HOM05D006947 ORTHO05D008818 3.9e-146 523.1 634 49.5
Migut.O00818 Erythranthe guttata HOM05D006947 ORTHO05D008818 2.5e-137 493.8 571 52.2
PSO782G4825 Papaver somniferum HOM05D006947 ORTHO05D008818 1.6e-136 491.1 485 55.1
PSO063G5930 Papaver somniferum HOM05D006947 ORTHO05D008818 4.5e-134 483.0 520 53.1
Oeu023430.2 Olea europaea HOM05D006947 ORTHO05D008818 2.0e-118 431.0 876 36.8
Pp3c18_19500 Physcomitrium patens HOM05D006947 ORTHO05D008818 2.5e-108 397.5 798 34.5
Nn4g24252 Nelumbo nucifera HOM05D006947 ORTHO05D008818 1.2e-89 335.5 780 34.9
AagrBONN_evm.TU.Sc2ySwM_117.3643 Anthoceros agrestis HOM05D006947 ORTHO05D008818 1.5e-81 308.5 371 45.3
Nitab4.5_0000532g0040 Nicotiana tabacum HOM05D006947 ORTHO05D008818 6.6e-77 293.1 245 65.3
Hma1.2p1_0330F.1_g127420 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 1.5e-76 292.0 276 61.2
Mapoly0112s0009 Marchantia polymorpha HOM05D006947 ORTHO05D008818 9.8e-73 279.3 624 31.9
Cpa.g.sc1084.1 Carica papaya HOM05D006947 ORTHO05D008818 9.2e-71 272.7 247 60.7
SalBow8G4359 Salvia bowleyana HOM05D006947 ORTHO05D008818 8.0e-67 259.6 225 62.2
Nitab4.5_0000532g0050 Nicotiana tabacum HOM05D006947 ORTHO05D008818 3.5e-62 244.2 250 52.4
PGSC0003DMG400015903 Solanum tuberosum HOM05D006947 ORTHO05D008818 3.3e-60 237.7 198 65.7
MD13G1021800 Malus domestica HOM05D006947 ORTHO05D008818 4.3e-60 237.3 277 52.0
CBR_g50426 Chara braunii HOM05D006947 ORTHO05D008818 4.9e-48 197.2 870 24.6
Psat1g011800 Pisum sativum HOM05D006947 ORTHO05D008818 6.2e-27 127.1 146 50.7
GSVIVG01031683001 Vitis vinifera HOM05D006947 ORTHO05D005406 1.7e-24 119.0 142 47.9
Psat6g175840 Pisum sativum HOM05D006947 ORTHO05D005363 2.3e-21 108.6 108 56.5
Psat4g128000 Pisum sativum HOM05D002621 ORTHO05D004807 8.2e-19 100.1 95 57.9
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 3.0e-13 81.6 129 38.8
Oeu059516.1 Olea europaea HOM05D001630 ORTHO05D002505 5.3e-10 70.9 69 55.1
ECA240G1335 Erigeron canadensis HOM05D001865 ORTHO05D001815 1.9e-07 62.4 224 29.0
ECA232G1609 Erigeron canadensis HOM05D001865 ORTHO05D001815 2.1e-06 58.9 223 27.8


User provided reference genes

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