Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G020900 Phaseolus vulgaris HOM05D007950 ORTHO05D009951 3.0e-31 137.9 70 100.0
arahy.Tifrunner.gnm1.ann1.7G47EE Arachis hypogaea HOM05D007950 ORTHO05D009951 5.5e-25 117.1 70 80.0
arahy.Tifrunner.gnm1.ann1.U6R6BR Arachis hypogaea HOM05D007950 ORTHO05D009951 5.5e-25 117.1 70 80.0
Glyma.09G123700 Glycine max HOM05D007950 ORTHO05D009951 7.9e-24 113.2 70 82.9
Psat1g042280 Pisum sativum HOM05D007950 ORTHO05D009951 3.9e-23 110.9 70 75.7
Medtr6g086645 Medicago truncatula HOM05D007950 ORTHO05D009951 7.4e-22 106.7 68 76.5
CSS0015996 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 1.7e-21 105.5 68 75.0
vmacro20696 Vaccinium macrocarpon HOM05D007950 ORTHO05D009951 1.7e-21 105.5 70 71.4
TPR.G35274 Trifolium pratense HOM05D007950 ORTHO05D009951 2.8e-21 104.8 66 72.7
GSVIVG01015395001 Vitis vinifera HOM05D007950 ORTHO05D009951 4.8e-21 104.0 70 71.4
Eucgr.C01044 Eucalyptus grandis HOM05D007950 ORTHO05D009951 1.1e-20 102.8 70 68.6
MD15G1186200 Malus domestica HOM05D007950 ORTHO05D009951 5.3e-20 100.5 70 67.1
Thecc.09G111000 Theobroma cacao HOM05D007950 ORTHO05D009951 1.5e-19 99.0 70 68.6
QL02p085472 Quercus lobata HOM05D007950 ORTHO05D009951 2.6e-19 98.2 69 65.2
RcHm_v2.0_Chr2g0090511 Rosa chinensis HOM05D007950 ORTHO05D009951 4.5e-19 97.4 70 65.7
Actinidia20354 Actinidia chinensis HOM05D007950 ORTHO05D009951 2.2e-18 95.1 68 64.7
Ciclev10010772m.g Citrus clementina HOM05D007950 ORTHO05D009951 2.2e-18 95.1 70 65.7
FvH4_1g04841 Fragaria vesca HOM05D007950 ORTHO05D009951 2.2e-18 95.1 70 62.9
FAN19G2230 Fragaria x ananassa HOM05D007950 ORTHO05D009951 2.2e-18 95.1 70 62.9
MD02G1047700 Malus domestica HOM05D007950 ORTHO05D009951 2.2e-18 95.1 70 64.3
FAN26G3407 Fragaria x ananassa HOM05D007950 ORTHO05D009951 2.9e-18 94.7 70 62.9
Manes.16G116501 Manihot esculenta HOM05D007950 ORTHO05D009951 6.5e-18 93.6 70 61.4
FAN23G0617 Fragaria x ananassa HOM05D007950 ORTHO05D009951 1.4e-17 92.4 70 61.4
Prupe.7G230500 Prunus persica HOM05D007950 ORTHO05D009951 1.9e-17 92.0 61 68.9
CiPaw.04G164400 Carya illinoinensis HOM05D007950 ORTHO05D009951 2.5e-17 91.7 61 68.9
TAR636G2963 Trochodendron aralioides HOM05D007950 ORTHO05D009951 4.2e-17 90.9 68 63.2
CiPaw.03G232500 Carya illinoinensis HOM05D007950 ORTHO05D009951 9.4e-17 89.7 69 62.3
QL05p023317 Quercus lobata HOM05D007950 ORTHO05D009951 9.4e-17 89.7 69 59.4
ClCG06G008510 Citrullus lanatus HOM05D007950 ORTHO05D009951 1.2e-16 89.4 70 58.6
Gohir.D06G060600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 1.6e-16 89.0 68 63.2
Gorai.010G070600 Gossypium raimondii HOM05D007950 ORTHO05D009951 1.6e-16 89.0 68 63.2
Gohir.A06G062300 Gossypium hirsutum HOM05D007950 ORTHO05D009951 2.1e-16 88.6 68 61.8
Nn8g39199 Nelumbo nucifera HOM05D007950 ORTHO05D009951 2.1e-16 88.6 70 61.4
CsaV3_1G030490 Cucumis sativus L. HOM05D007950 ORTHO05D009951 3.0e-15 84.7 68 54.4
CSS0048253 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 3.9e-15 84.3 67 59.7
Potri.001G181701 Populus trichocarpa HOM05D007950 ORTHO05D009951 3.9e-15 84.3 67 59.7
ATR0980G014 Amborella trichopoda HOM05D007950 ORTHO05D009951 2.0e-14 82.0 70 52.9
PGR102G0372 Punica granatum HOM05D007950 ORTHO05D009951 2.6e-14 81.6 70 48.6
CSS0032282 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 4.4e-14 80.9 67 56.7
CiPaw.02G150700 Carya illinoinensis HOM05D007950 ORTHO05D009951 9.7e-14 79.7 68 57.4
Thecc.06G089600 Theobroma cacao HOM05D007950 ORTHO05D009951 1.3e-13 79.3 68 55.9
Gohir.1Z049586 Gossypium hirsutum HOM05D007950 ORTHO05D009951 1.7e-13 79.0 70 55.7
Gohir.A05G130600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 2.2e-13 78.6 68 57.4
Gohir.D05G129500 Gossypium hirsutum HOM05D007950 ORTHO05D009951 2.2e-13 78.6 68 57.4
Eucgr.J02984 Eucalyptus grandis HOM05D007950 ORTHO05D009951 2.8e-13 78.2 60 58.3
Gohir.D03G063400 Gossypium hirsutum HOM05D007950 ORTHO05D009951 3.7e-13 77.8 70 54.3
Gorai.002G059800 Gossypium raimondii HOM05D007950 ORTHO05D009951 3.7e-13 77.8 70 54.3
Nn2g11757 Nelumbo nucifera HOM05D007950 ORTHO05D009951 4.8e-13 77.4 70 52.9
Manes.11G045700 Manihot esculenta HOM05D007950 ORTHO05D009951 8.2e-13 76.6 68 54.4
Medtr6g086730 Medicago truncatula HOM05D007950 ORTHO05D009951 1.4e-12 75.9 50 74.0
Manes.03G020101 Manihot esculenta HOM05D007950 ORTHO05D009951 2.4e-12 75.1 70 54.3
Sc10g0007380 Simmondsia chinensis HOM05D007950 ORTHO05D009951 1.2e-11 72.8 68 51.5
Haze_16407 Corylus avellana HOM05D007950 ORTHO05D009951 3.5e-11 71.2 70 50.0
Haze_16408 Corylus avellana HOM05D007950 ORTHO05D009951 3.5e-11 71.2 70 50.0
Medtr4g012580 Medicago truncatula HOM05D007950 ORTHO05D009951 3.5e-11 71.2 65 52.3
Cc06_g09630 Coffea canephora HOM05D007950 ORTHO05D009951 4.5e-11 70.9 61 55.7
Lj3g0016273 Lotus japonicus HOM05D007950 ORTHO05D009951 4.5e-11 70.9 70 48.6
Medtr4g012610 Medicago truncatula HOM05D007950 ORTHO05D009951 5.9e-11 70.5 70 48.6
CDE06G0019 Ceratophyllum demersum HOM05D007950 ORTHO05D009951 1.3e-10 69.3 67 49.3
Psat7g251240 Pisum sativum HOM05D007950 ORTHO05D009951 2.2e-10 68.6 70 47.1
Lalb_Chr04g0262731 Lupinus albus HOM05D007950 ORTHO05D009951 5.0e-10 67.4 70 50.0
Prupe.3G070100 Prunus persica HOM05D007950 ORTHO05D009951 5.0e-10 67.4 74 54.1
TPR.G24171 Trifolium pratense HOM05D007950 ORTHO05D009951 8.5e-10 66.6 65 49.2
Sed0000041 Sechium edule HOM05D007950 ORTHO05D009951 1.5e-09 65.9 60 50.0
Potri.003G054001 Populus trichocarpa HOM05D007950 ORTHO05D009951 1.9e-09 65.5 67 49.3
Glyma.08G206200 Glycine max HOM05D007950 ORTHO05D009951 2.5e-09 65.1 65 49.2
arahy.Tifrunner.gnm1.ann1.6Z76EK Arachis hypogaea HOM05D007950 ORTHO05D009951 3.2e-09 64.7 72 48.6
Glyma.07G005901 Glycine max HOM05D000325 ORTHO05D002025 3.2e-09 64.7 66 48.5
Dinv36624 Davidia involucrata HOM05D007950 ORTHO05D009951 5.5e-09 63.9 47 66.0
Lsat_1_v5_gn_5_103401 Lactuca sativa HOM05D007950 ORTHO05D009951 9.4e-09 63.2 70 45.7
HanXRQChr09g0275201 Helianthus annuus HOM05D007950 ORTHO05D009951 1.2e-08 62.8 74 40.5
Phvul.010G150100 Phaseolus vulgaris HOM05D007950 ORTHO05D009951 8.0e-08 60.1 70 41.4
SalBow2G2396 Salvia bowleyana HOM05D007950 ORTHO05D009951 1.0e-07 59.7 52 51.9
Sc08g0007460 Simmondsia chinensis HOM05D007950 ORTHO05D009951 1.8e-07 58.9 68 41.2
FAN05G0591 Fragaria x ananassa HOM05D007950 ORTHO05D009951 6.7e-07 57.0 71 42.3
Cc04_g03310 Coffea canephora HOM05D007950 ORTHO05D009951 1.2e-06 56.2 68 39.7
FAN14G2438 Fragaria x ananassa HOM05D007950 ORTHO05D009951 1.2e-06 56.2 71 42.3
TPR.G8534 Trifolium pratense HOM05D007950 ORTHO05D009951 1.2e-06 56.2 65 41.5
Migut.D01581 Erythranthe guttata HOM05D007950 ORTHO05D009951 2.0e-06 55.5 65 40.0


User provided reference genes

Program Settings