Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G017700 Phaseolus vulgaris HOM05D004497 ORTHO05D005539 7.5e-53 210.3 110 100.0
Phvul.003G017500 Phaseolus vulgaris HOM05D004497 ORTHO05D005539 7.3e-32 140.6 85 84.7
VMungo0331G1674 Vigna mungo HOM05D004497 ORTHO05D005539 1.6e-26 122.9 75 84.0
Glyma.07G068400 Glycine max HOM05D004497 ORTHO05D005539 1.7e-25 119.4 75 82.7
Glyma.16G034400 Glycine max HOM05D004497 ORTHO05D005539 5.1e-25 117.9 75 81.3
Lj1g0020744 Lotus japonicus HOM05D004497 ORTHO05D005539 5.8e-21 104.4 75 72.0
Lalb_Chr03g0040831 Lupinus albus HOM05D004497 ORTHO05D005539 2.2e-20 102.4 90 55.6
Ca_04603_v3 Cicer arietinum L. HOM05D004497 ORTHO05D005539 4.1e-19 98.2 75 68.0
Ca_09070_v3 Cicer arietinum L. HOM05D004497 ORTHO05D005539 1.0e-17 93.6 75 64.0
TPR.G34454 Trifolium pratense HOM05D004497 ORTHO05D005539 1.3e-17 93.2 75 65.3
Prupe.1G584300 Prunus persica HOM05D004497 ORTHO05D005539 3.0e-17 92.0 75 61.3
arahy.Tifrunner.gnm1.ann1.0L2FVX Arachis hypogaea HOM05D004497 ORTHO05D005539 3.9e-17 91.7 75 61.3
arahy.Tifrunner.gnm1.ann1.16KDXT Arachis hypogaea HOM05D004497 ORTHO05D005539 8.7e-17 90.5 75 60.0
Psat3g028160 Pisum sativum HOM05D004497 ORTHO05D005539 2.5e-16 89.0 75 65.3
Cfa013402 Carpinus fangiana HOM05D004497 ORTHO05D005539 3.3e-16 88.6 75 57.3
Medtr7g106650 Medicago truncatula HOM05D004497 ORTHO05D005539 3.3e-16 88.6 95 53.7
Haze_07247 Corylus avellana HOM05D004497 ORTHO05D005539 7.3e-16 87.4 75 57.3
HanXRQChr05g0153981 Helianthus annuus HOM05D004497 ORTHO05D005539 9.6e-16 87.0 74 56.8
Nitab4.5_0000903g0080 Nicotiana tabacum HOM05D004497 ORTHO05D005539 9.6e-16 87.0 75 57.3
CSS0032894 Camellia sinensis var. sinensis HOM05D004497 ORTHO05D005539 1.6e-15 86.3 75 57.3
Actinidia25597 Actinidia chinensis HOM05D004497 ORTHO05D005539 2.1e-15 85.9 75 57.3
Duzib068G0683 Durio zibethinus HOM05D004497 ORTHO05D005539 3.6e-15 85.1 75 57.3
Duzib205G0501 Durio zibethinus HOM05D004497 ORTHO05D005539 3.6e-15 85.1 75 54.7
Nitab4.5_0002978g0150 Nicotiana tabacum HOM05D004497 ORTHO05D005539 3.6e-15 85.1 75 57.3
Cc05_g04600 Coffea canephora HOM05D004497 ORTHO05D005539 6.2e-15 84.3 75 57.3
Dinv11148 Davidia involucrata HOM05D004497 ORTHO05D005539 6.2e-15 84.3 74 59.5
Thecc.03G125300 Theobroma cacao HOM05D004497 ORTHO05D005539 6.2e-15 84.3 75 57.3
QL10p004476 Quercus lobata HOM05D004497 ORTHO05D005539 1.1e-14 83.6 75 60.0
Dinv04858 Davidia involucrata HOM05D004497 ORTHO05D005539 1.4e-14 83.2 75 57.3
Gohir.D09G246800 Gossypium hirsutum HOM05D004497 ORTHO05D005539 1.4e-14 83.2 80 51.2
Peaxi162Scf00078g00424 Petunia axillaris HOM05D004497 ORTHO05D005539 1.8e-14 82.8 75 56.0
FvH4_5g07760 Fragaria vesca HOM05D004497 ORTHO05D005539 2.4e-14 82.4 75 58.7
FAN13G1359 Fragaria x ananassa HOM05D004497 ORTHO05D005539 2.4e-14 82.4 75 58.7
FAN18G2816 Fragaria x ananassa HOM05D004497 ORTHO05D005539 2.4e-14 82.4 75 58.7
Gohir.A12G276900 Gossypium hirsutum HOM05D004497 ORTHO05D005539 2.4e-14 82.4 80 50.0
FAN08G0052 Fragaria x ananassa HOM05D004497 ORTHO05D005539 4.0e-14 81.6 75 58.7
RcHm_v2.0_Chr7g0190661 Rosa chinensis HOM05D004497 ORTHO05D005539 4.0e-14 81.6 75 57.3
Gohir.A09G246200 Gossypium hirsutum HOM05D004497 ORTHO05D005539 6.9e-14 80.9 80 50.0
TAR625G0069 Trochodendron aralioides HOM05D004497 ORTHO05D005539 6.9e-14 80.9 75 53.3
CiPaw.08G116800 Carya illinoinensis HOM05D004497 ORTHO05D005539 9.0e-14 80.5 75 53.3
Cfa014010 Carpinus fangiana HOM05D004497 ORTHO05D005539 1.2e-13 80.1 70 54.3
MD06G1147200 Malus domestica HOM05D004497 ORTHO05D005539 1.2e-13 80.1 75 52.0
TWI14G0260 Tripterygium wilfordii HOM05D004497 ORTHO05D005539 1.2e-13 80.1 75 56.0
TWI39G1139 Tripterygium wilfordii HOM05D004497 ORTHO05D005539 1.2e-13 80.1 75 54.7
COL.COLO4_28066 Corchorus olitorius HOM05D004497 ORTHO05D005539 1.5e-13 79.7 75 56.0
Cpa.g.sc166.23 Carica papaya HOM05D004497 ORTHO05D005539 2.0e-13 79.3 82 50.0
MELO3C002347.2 Cucumis melo HOM05D004497 ORTHO05D005539 2.6e-13 79.0 75 54.7
Gorai.006G271300 Gossypium raimondii HOM05D004497 ORTHO05D005539 2.6e-13 79.0 80 48.8
Lsat_1_v5_gn_5_13520 Lactuca sativa HOM05D004497 ORTHO05D005539 2.6e-13 79.0 73 53.4
Atru.chr3.3406 Acer truncatum HOM05D004497 ORTHO05D005539 4.4e-13 78.2 75 52.0
FAN04G2053 Fragaria x ananassa HOM05D004497 ORTHO05D005539 4.4e-13 78.2 75 56.0
Sed0020059 Sechium edule HOM05D004497 ORTHO05D005539 5.8e-13 77.8 75 53.3
CsaV3_1G009480 Cucumis sativus L. HOM05D004497 ORTHO05D005539 7.6e-13 77.4 74 54.1
QL04p081834 Quercus lobata HOM05D004497 ORTHO05D005539 7.6e-13 77.4 75 57.3
Sc10g0010400 Simmondsia chinensis HOM05D004497 ORTHO05D005539 7.6e-13 77.4 75 52.0
Rhsim08G0187300 Rhododendron simsii HOM05D004497 ORTHO05D005539 9.9e-13 77.0 77 53.2
Ciclev10020238m.g Citrus clementina HOM05D004497 ORTHO05D005539 1.3e-12 76.6 75 53.3
ClCG03G003620 Citrullus lanatus HOM05D004497 ORTHO05D005539 2.2e-12 75.9 76 55.3
Eucgr.C01065 Eucalyptus grandis HOM05D004497 ORTHO05D005539 2.2e-12 75.9 93 45.2
Lj9A476T57 Lonicera japonica HOM05D004497 ORTHO05D005539 2.2e-12 75.9 75 50.7
Potri.015G092400 Populus trichocarpa HOM05D004497 ORTHO05D005539 3.8e-12 75.1 74 54.1
Sabra15G0114200 Salix brachista HOM05D004497 ORTHO05D005539 3.8e-12 75.1 75 54.7
PSO063G4711 Papaver somniferum HOM05D004497 ORTHO05D005539 4.9e-12 74.7 77 55.8
PSO782G0077 Papaver somniferum HOM05D004497 ORTHO05D005539 4.9e-12 74.7 77 55.8
Potri.012G095100 Populus trichocarpa HOM05D004497 ORTHO05D005539 4.9e-12 74.7 74 51.4
Hund03342 Selenicereus undatus HOM05D004497 ORTHO05D005539 4.9e-12 74.7 77 53.2
ECA246G4485 Erigeron canadensis HOM05D004497 ORTHO05D005539 6.4e-12 74.3 74 51.4
PGR083G2085 Punica granatum HOM05D004497 ORTHO05D005539 1.1e-11 73.6 72 51.4
Carub.0001s2754 Capsella rubella HOM05D004497 ORTHO05D005539 1.4e-11 73.2 94 47.9
Manes.14G053800 Manihot esculenta HOM05D004497 ORTHO05D005539 1.4e-11 73.2 75 52.0
Eucgr.K00186 Eucalyptus grandis HOM05D004497 ORTHO05D005539 2.4e-11 72.4 75 52.0
DCAR_012679 Daucus carota HOM05D004497 ORTHO05D005539 3.2e-11 72.0 75 49.3
AUR62025903 Chenopodium quinoa HOM05D004497 ORTHO05D005539 4.2e-11 71.6 80 52.5
Sp1g25270 Schrenkiella parvula HOM05D004497 ORTHO05D005539 4.2e-11 71.6 76 53.9
SGA_v2.0_scaffold215G42316 Striga asiatica HOM05D004497 ORTHO05D005539 4.2e-11 71.6 75 49.3
AUR62025086 Chenopodium quinoa HOM05D004497 ORTHO05D005539 7.1e-11 70.9 75 54.7
MD14G1161100 Malus domestica HOM05D004497 ORTHO05D005539 7.1e-11 70.9 75 49.3
CDE08G0729 Ceratophyllum demersum HOM05D004497 ORTHO05D005539 9.3e-11 70.5 77 48.1
vmacro20468 Vaccinium macrocarpon HOM05D004497 ORTHO05D005539 9.3e-11 70.5 82 50.0
Ah.08g212900 Amaranthus hybridus HOM05D004497 ORTHO05D005539 1.2e-10 70.1 78 53.8
Solyc08g008160.4 Solanum lycopersicum HOM05D004497 ORTHO05D005539 1.2e-10 70.1 75 52.0
Sopen08g004010 Solanum pennellii HOM05D004497 ORTHO05D005539 1.2e-10 70.1 75 52.0
TAR629G1275 Trochodendron aralioides HOM05D004497 ORTHO05D005539 1.2e-10 70.1 85 47.1
AL1G43130 Arabidopsis lyrata HOM05D004497 ORTHO05D005539 1.6e-10 69.7 95 48.4
C03p75750 Brassica napus HOM05D004497 ORTHO05D005539 1.6e-10 69.7 75 48.0
QL07p000007 Quercus lobata HOM05D004497 ORTHO05D005539 1.6e-10 69.7 75 53.3
QL93p0225_0015 Quercus lobata HOM05D004497 ORTHO05D005539 1.6e-10 69.7 75 53.3
PGSC0003DMG400005828 Solanum tuberosum HOM05D004497 ORTHO05D005539 1.6e-10 69.7 75 52.0
Aqoxy5G03475 Aquilegia oxysepala HOM05D004497 ORTHO05D005539 2.1e-10 69.3 75 50.7
BraA08t34469Z Brassica rapa HOM05D004497 ORTHO05D005539 2.1e-10 69.3 76 53.9
THA.LOC104820611 Tarenaya hassleriana HOM05D004497 ORTHO05D005539 2.1e-10 69.3 74 48.6
BraA09t39216Z Brassica rapa HOM05D004497 ORTHO05D005539 2.7e-10 68.9 75 48.0
Aa31LG6G6220 Aethionema arabicum HOM05D004497 ORTHO05D005539 3.5e-10 68.6 94 47.9
AT1G29320 Arabidopsis thaliana HOM05D004497 ORTHO05D005539 3.5e-10 68.6 76 51.3
A08p25140 Brassica napus HOM05D004497 ORTHO05D005539 4.6e-10 68.2 75 46.7
CANSAT56G3508 Cannabis sativa HOM05D004497 ORTHO05D005539 4.6e-10 68.2 75 49.3
CARHR028640 Cardamine hirsuta HOM05D004497 ORTHO05D005539 4.6e-10 68.2 95 45.3
CiPaw.11G010200 Carya illinoinensis HOM05D004497 ORTHO05D005539 4.6e-10 68.2 67 55.2
Migut.I00519 Erythranthe guttata HOM05D004497 ORTHO05D005539 1.0e-09 67.0 75 48.0
THA.LOC104814264 Tarenaya hassleriana HOM05D004497 ORTHO05D005539 2.3e-09 65.9 75 49.3
GSVIVG01013111001 Vitis vinifera HOM05D004497 ORTHO05D005539 2.3e-09 65.9 75 52.0
Nn4g26409 Nelumbo nucifera HOM05D004497 ORTHO05D005539 3.0e-09 65.5 76 52.6
MSTRG.22910 Avicennia marina HOM05D004497 ORTHO05D005539 3.9e-09 65.1 75 45.3
BcaC05g26958 Brassica carinata HOM05D004497 ORTHO05D005539 3.9e-09 65.1 75 48.0
C05p28100 Brassica napus HOM05D004497 ORTHO05D005539 3.9e-09 65.1 75 48.0
BolC5t31537H Brassica oleracea HOM05D004497 ORTHO05D005539 3.9e-09 65.1 75 48.0
Thhalv10007651m.g Eutrema salsugineum HOM05D004497 ORTHO05D005539 3.9e-09 65.1 75 48.0
Oeu005018.3 Olea europaea HOM05D004497 ORTHO05D005539 5.1e-09 64.7 92 40.2
BolC3t19835H Brassica oleracea HOM05D004497 ORTHO05D005539 6.6e-09 64.3 75 46.7
EL10As4g23444 Beta vulgaris HOM05D004497 ORTHO05D005539 8.7e-09 63.9 75 48.0
MBI11_g15865_MAGBIO Magnolia biondii HOM05D004497 ORTHO05D005539 1.1e-08 63.5 77 46.8
AUR62029644 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.9e-08 62.8 70 50.0
SalBow8G1477 Salvia bowleyana HOM05D004497 ORTHO05D005539 1.9e-08 62.8 75 41.3
BcaC01g00099 Brassica carinata HOM05D004497 ORTHO05D005539 2.5e-08 62.4 80 43.8
Aqoxy5G03495 Aquilegia oxysepala HOM05D004497 ORTHO05D005539 3.3e-08 62.0 70 47.1
arahy.Tifrunner.gnm1.ann1.FTJQ4M Arachis hypogaea HOM05D004497 ORTHO05D005539 4.3e-08 61.6 67 49.3
BcaB03g12154 Brassica carinata HOM05D004497 ORTHO05D005539 4.3e-08 61.6 75 46.7
A09p36980 Brassica napus HOM05D004497 ORTHO05D005539 1.6e-07 59.7 68 45.6
SHI10599 Sapria himalayana HOM05D004497 ORTHO05D005539 6.2e-07 57.8 77 45.5
Zm00001eb105680 Zea mays HOM05D004497 ORTHO05D005539 1.4e-06 56.6 81 40.7
BcaB07g32523 Brassica carinata HOM05D004497 ORTHO05D005539 4.0e-06 55.1 79 43.0
Os07g0506700 Oryza sativa ssp. japonica HOM05D004497 ORTHO05D005539 6.9e-06 54.3 83 39.8
Actinidia19491 Actinidia chinensis HOM05D004497 ORTHO05D005539 9.0e-06 53.9 52 55.8


User provided reference genes

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