Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G012500 Phaseolus vulgaris HOM05D006261 ORTHO05D007979 7.2e-251 870.2 457 100.0
VMungo1215G1075 Vigna mungo HOM05D006261 ORTHO05D007979 1.2e-221 773.1 457 89.1
Glyma.07G178400 Glycine max HOM05D006261 ORTHO05D007979 2.0e-208 729.2 455 83.7
Lj2g0017302 Lotus japonicus HOM05D006261 ORTHO05D007979 1.6e-186 656.4 457 76.6
TPR.G11138 Trifolium pratense HOM05D006261 ORTHO05D007979 1.1e-185 653.7 454 75.8
Lalb_Chr10g0095461 Lupinus albus HOM05D006261 ORTHO05D007979 3.1e-185 652.1 468 75.6
arahy.Tifrunner.gnm1.ann1.97F800 Arachis hypogaea HOM05D006261 ORTHO05D007979 4.0e-185 651.7 469 75.5
Psat6g096640 Pisum sativum HOM05D006261 ORTHO05D007979 4.0e-185 651.7 456 75.9
Ca_12470_v3 Cicer arietinum L. HOM05D006261 ORTHO05D007979 5.3e-185 651.4 456 75.4
arahy.Tifrunner.gnm1.ann1.WU5QTE Arachis hypogaea HOM05D006261 ORTHO05D007979 2.0e-184 649.4 469 75.1
Medtr1g034000 Medicago truncatula HOM05D006261 ORTHO05D007979 1.4e-182 643.3 456 74.6
Gorai.002G007100 Gossypium raimondii HOM05D006261 ORTHO05D007979 2.2e-162 576.2 463 66.3
Thecc.02G096300 Theobroma cacao HOM05D006261 ORTHO05D007979 8.2e-162 574.3 464 66.8
Prupe.8G116700 Prunus persica HOM05D006261 ORTHO05D007979 2.4e-161 572.8 464 66.8
QL11p038259 Quercus lobata HOM05D006261 ORTHO05D007979 9.1e-161 570.9 463 68.0
COL.COLO4_11716 Corchorus olitorius HOM05D006261 ORTHO05D007979 2.6e-160 569.3 463 66.3
Manes.15G143000 Manihot esculenta HOM05D006261 ORTHO05D007979 3.4e-160 568.9 464 65.7
Cfa005432 Carpinus fangiana HOM05D006261 ORTHO05D007979 2.2e-159 566.2 471 66.5
TWI31G0850 Tripterygium wilfordii HOM05D006261 ORTHO05D007979 3.8e-159 565.5 467 65.5
CANSAT25G2015 Cannabis sativa HOM05D006261 ORTHO05D007979 5.0e-159 565.1 458 65.9
FAN15G2665 Fragaria x ananassa HOM05D006261 ORTHO05D007979 5.0e-159 565.1 461 67.0
MD10G1089700 Malus domestica HOM05D006261 ORTHO05D007979 2.5e-158 562.8 463 66.3
FAN27G0123 Fragaria x ananassa HOM05D006261 ORTHO05D007979 1.6e-157 560.1 461 66.6
FAN20G2731 Fragaria x ananassa HOM05D006261 ORTHO05D007979 2.7e-157 559.3 461 66.4
GSVIVG01031798001 Vitis vinifera HOM05D006261 ORTHO05D007979 2.7e-157 559.3 457 66.5
RcHm_v2.0_Chr6g0259011 Rosa chinensis HOM05D006261 ORTHO05D007979 4.7e-157 558.5 459 66.7
Potri.009G106100 Populus trichocarpa HOM05D006261 ORTHO05D007979 1.0e-156 557.4 458 65.9
Eucgr.I01173 Eucalyptus grandis HOM05D006261 ORTHO05D007979 2.6e-155 552.7 464 64.2
Gohir.A01G006000 Gossypium hirsutum HOM05D006261 ORTHO05D007979 4.4e-155 552.0 463 64.1
CiPaw.05G054700 Carya illinoinensis HOM05D006261 ORTHO05D007979 5.7e-155 551.6 499 62.7
TAR381G0774 Trochodendron aralioides HOM05D006261 ORTHO05D007979 1.3e-154 550.4 473 63.2
Potri.004G144100 Populus trichocarpa HOM05D006261 ORTHO05D007979 2.2e-154 549.7 457 64.8
Ciclev10028211m.g Citrus clementina HOM05D006261 ORTHO05D007979 2.8e-154 549.3 463 63.9
Atru.chr5.2784_Atru.chr5.2785 Acer truncatum HOM05D006261 ORTHO05D007979 1.8e-153 546.6 465 63.0
Atru.chr5.2799_Atru.chr5.2800 Acer truncatum HOM05D006261 ORTHO05D007979 1.8e-153 546.6 465 63.0
CsaV3_7G008780 Cucumis sativus L. HOM05D006261 ORTHO05D007979 1.8e-153 546.6 462 63.6
Haze_01887 Corylus avellana HOM05D006261 ORTHO05D007979 4.1e-153 545.4 467 65.1
vmacro19482 Vaccinium macrocarpon HOM05D006261 ORTHO05D007979 9.1e-153 544.3 480 63.8
Nn5g30173 Nelumbo nucifera HOM05D006261 ORTHO05D007979 1.3e-151 540.4 471 62.6
Thhalv10025131m.g Eutrema salsugineum HOM05D006261 ORTHO05D007979 6.5e-151 538.1 467 61.5
SGA_v2.0_scaffold58G20611 Striga asiatica HOM05D006261 ORTHO05D007979 8.5e-151 537.7 454 62.6
Sabra04G0095700 Salix brachista HOM05D006261 ORTHO05D007979 1.1e-150 537.3 466 62.7
Hund06186 Selenicereus undatus HOM05D006261 ORTHO05D007979 1.1e-150 537.3 462 63.4
Aa31LG2G16340 Aethionema arabicum HOM05D006261 ORTHO05D007979 1.5e-150 537.0 464 60.8
C01p04840 Brassica napus HOM05D006261 ORTHO05D007979 1.5e-150 537.0 459 62.1
BolC1t00468H Brassica oleracea HOM05D006261 ORTHO05D007979 4.2e-150 535.4 459 61.7
Sp7g31680 Schrenkiella parvula HOM05D006261 ORTHO05D007979 4.2e-150 535.4 467 61.2
THA.LOC104807349 Tarenaya hassleriana HOM05D006261 ORTHO05D007979 4.2e-150 535.4 466 60.5
AT4G33945 Arabidopsis thaliana HOM05D006261 ORTHO05D007979 7.2e-150 534.6 467 60.8
BraA01t00432Z Brassica rapa HOM05D006261 ORTHO05D007979 7.2e-150 534.6 459 61.9
A01p04450 Brassica napus HOM05D006261 ORTHO05D007979 9.4e-150 534.3 459 61.9
Rhsim05G0080700 Rhododendron simsii HOM05D006261 ORTHO05D007979 3.6e-149 532.3 478 62.8
Hma1.2p1_0584F.1_g183110 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 4.7e-149 531.9 494 59.5
Hma1.2p1_3161F.1_g333480 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 4.7e-149 531.9 495 59.4
Lsat_1_v5_gn_7_87821 Lactuca sativa HOM05D006261 ORTHO05D007979 4.7e-149 531.9 455 62.9
AL7G17470 Arabidopsis lyrata HOM05D006261 ORTHO05D007979 1.4e-148 530.4 467 60.2
Aqoxy6G01433 Aquilegia oxysepala HOM05D006261 ORTHO05D007979 2.0e-147 526.6 459 63.0
Carub.0007s0647 Capsella rubella HOM05D006261 ORTHO05D007979 2.2e-146 523.1 467 60.0
PSO541G6069 Papaver somniferum HOM05D006261 ORTHO05D007979 2.8e-146 522.7 466 62.0
Cc02_g18510 Coffea canephora HOM05D006261 ORTHO05D007979 4.8e-146 521.9 463 61.1
MELO3C018434.2 Cucumis melo HOM05D006261 ORTHO05D007979 3.1e-145 519.2 462 61.7
SalBow6G7179 Salvia bowleyana HOM05D006261 ORTHO05D007979 9.1e-145 517.7 454 60.4
Migut.B00311 Erythranthe guttata HOM05D006261 ORTHO05D007979 1.0e-143 514.2 456 61.0
PGSC0003DMG400022938 Solanum tuberosum HOM05D006261 ORTHO05D007979 1.0e-143 514.2 463 60.9
unitig_21.g20756 Utricularia gibba HOM05D006261 ORTHO05D007979 1.0e-143 514.2 456 60.1
CSS0049642 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 1.3e-143 513.8 473 61.3
EL10Ac9g21824 Beta vulgaris HOM05D006261 ORTHO05D007979 3.8e-143 512.3 475 60.0
MBI02_g21208_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 8.5e-143 511.1 484 60.7
Solyc11g044870.2 Solanum lycopersicum HOM05D006261 ORTHO05D007979 1.5e-142 510.4 463 60.5
CSS0020679 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 9.4e-142 507.7 468 61.3
Sopen11g020360 Solanum pennellii HOM05D006261 ORTHO05D007979 1.6e-141 506.9 463 59.6
Actinidia17850 Actinidia chinensis HOM05D006261 ORTHO05D007979 5.2e-140 501.9 441 62.8
AUR62011430 Chenopodium quinoa HOM05D006261 ORTHO05D007979 1.5e-139 500.4 464 58.6
HanXRQChr16g0508741 Helianthus annuus HOM05D006261 ORTHO05D007979 1.7e-138 496.9 455 59.3
AUR62016631 Chenopodium quinoa HOM05D006261 ORTHO05D007979 1.5e-134 483.8 477 55.8
Gohir.D01G006100 Gossypium hirsutum HOM05D006261 ORTHO05D007979 3.2e-134 482.6 463 57.7
Sc08g0000100 Simmondsia chinensis HOM05D006261 ORTHO05D007979 4.2e-134 482.3 420 61.2
ClCG02G005750 Citrullus lanatus HOM05D006261 ORTHO05D007979 9.5e-134 481.1 462 57.6
Oeu007256.2 Olea europaea HOM05D006261 ORTHO05D007979 3.4e-131 472.6 416 60.6
ATR0097G005 Amborella trichopoda HOM05D006261 ORTHO05D007979 4.4e-131 472.2 484 54.8
Nitab4.5_0000736g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 1.1e-129 467.6 466 57.1
Ah.01g020100 Amaranthus hybridus HOM05D006261 ORTHO05D007979 1.4e-129 467.2 469 56.3
Lj9C360T7 Lonicera japonica HOM05D006261 ORTHO05D007979 1.8e-129 466.8 482 56.4
Sed0027300 Sechium edule HOM05D006261 ORTHO05D007979 1.2e-128 464.2 378 65.6
FAN24G3480 Fragaria x ananassa HOM05D006261 ORTHO05D007979 2.7e-128 463.0 427 62.1
Duzib052G0221 Durio zibethinus HOM05D006261 ORTHO05D007979 4.5e-128 462.2 461 56.2
Peaxi162Scf00684g00565 Petunia axillaris HOM05D006261 ORTHO05D007979 5.9e-128 461.8 411 61.6
Zm00001eb255680 Zea mays HOM05D006261 ORTHO05D007979 8.0e-125 451.4 490 52.4
Cpa.g.sc62.43 Carica papaya HOM05D006261 ORTHO05D007979 5.9e-120 435.3 321 71.7
Os02g0761200 Oryza sativa ssp. japonica HOM05D006261 ORTHO05D007979 1.7e-119 433.7 467 52.2
HPP92_004238 Vanilla planifolia HOM05D006261 ORTHO05D007979 4.7e-117 425.6 469 52.0
HPP92_004260 Vanilla planifolia HOM05D006261 ORTHO05D007979 3.1e-116 422.9 469 52.2
PGR142G4090 Punica granatum HOM05D006261 ORTHO05D007979 2.0e-115 420.2 315 70.8
ECA236G1018 Erigeron canadensis HOM05D006261 ORTHO05D001911 2.9e-114 416.4 368 59.5
MSTRG.16765 Avicennia marina HOM05D006261 ORTHO05D007979 4.1e-113 412.5 454 51.8
SEGI_22642 Sequoiadendron giganteum HOM05D006261 ORTHO05D007979 1.5e-110 404.1 479 48.0
FvH4_2g06790 Fragaria vesca HOM05D006261 ORTHO05D007979 1.9e-110 403.7 360 62.2
CDE10G1007 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 5.8e-99 365.5 512 45.3
Dinv23589 Davidia involucrata HOM05D006261 ORTHO05D007979 8.4e-98 361.7 331 61.9
Nitab4.5_0002141g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 2.1e-93 347.1 353 55.0
DCAR_000243 Daucus carota HOM05D006261 ORTHO05D007979 2.8e-93 346.7 324 59.3
SHI05382 Sapria himalayana HOM05D006261 ORTHO05D007979 1.3e-87 327.8 365 53.2
CAN.G406.2 Capsicum annuum HOM05D006261 ORTHO05D007979 8.7e-87 325.1 329 55.9
Mapoly0088s0010 Marchantia polymorpha HOM05D006261 ORTHO05D007979 1.0e-79 301.6 484 37.8
BcaB03g11867 Brassica carinata HOM05D006261 ORTHO05D007979 2.3e-79 300.4 266 63.2
CARHR242070 Cardamine hirsuta HOM05D006261 ORTHO05D007979 3.1e-76 290.0 220 69.1
SMO116G0201 Selaginella moellendorffii HOM05D006261 ORTHO05D007979 2.7e-72 276.9 420 42.4
CDE10G0955 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 6.7e-71 272.3 345 47.2
Haze_01888 Corylus avellana HOM05D006261 ORTHO05D007979 2.1e-69 267.3 302 54.6
RcHm_v2.0_Chr6g0252951 Rosa chinensis HOM05D006261 ORTHO05D007979 4.8e-61 239.6 351 44.7
Pp3c15_12310 Physcomitrium patens HOM05D006261 ORTHO05D007979 2.9e-58 230.3 490 34.3
Glyma.20G009900 Glycine max HOM05D006261 ORTHO05D007979 2.5e-54 217.2 199 63.8
MBI02_g32602_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 4.4e-46 189.9 154 65.6
MCO13G090 Micromonas commoda HOM05D006261 ORTHO05D007979 1.8e-44 184.5 481 32.4
Cre07.g343850 Chlamydomonas reinhardtii HOM05D006261 ORTHO05D007979 6.1e-32 142.9 495 28.7
MBI15_g16863_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 9.1e-28 129.0 126 58.7
CAN.G406.3 Capsicum annuum HOM05D006261 ORTHO05D007979 8.5e-26 122.5 135 51.9
DCAR_022063 Daucus carota HOM05D006261 ORTHO05D007979 9.4e-25 119.0 85 67.1
SHI05383 Sapria himalayana HOM05D006261 ORTHO05D007979 2.4e-20 104.4 102 52.0
PRCOL_00000949 Prasinoderma coloniale HOM05D006261 ORTHO05D007979 2.0e-19 101.3 399 26.6
BcaB01g01387 Brassica carinata HOM05D006261 ORTHO05D007979 3.5e-19 100.5 82 64.6
BcaB06g27277 Brassica carinata HOM05D006261 ORTHO05D007979 7.7e-19 99.4 83 67.5
BcaB01g01385 Brassica carinata HOM05D006261 ORTHO05D007979 1.0e-18 99.0 82 65.9
Dinv42128 Davidia involucrata HOM05D006261 ORTHO05D007979 1.7e-18 98.2 372 30.6
CBR_g53672 Chara braunii HOM05D000019 ORTHO05D000353 3.3e-17 94.0 436 23.6
CAN.G93.11 Capsicum annuum HOM05D006261 ORTHO05D007979 1.2e-16 92.0 102 49.0
Lj1g0009361 Lotus japonicus HOM05D041574 ORTHO05D236155 1.7e-10 71.6 73 56.2
Lj5g0023620 Lotus japonicus HOM05D041574 ORTHO05D236101 8.6e-10 69.3 73 54.8


User provided reference genes

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