Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G012000 Phaseolus vulgaris HOM05D005562 ORTHO05D007785 4.8e-227 790.8 394 100.0
VMungo1215G0206 Vigna mungo HOM05D005562 ORTHO05D007785 6.7e-213 743.8 394 93.7
Glyma.20G009400 Glycine max HOM05D005562 ORTHO05D007785 4.8e-203 711.1 395 90.6
Glyma.07G179700 Glycine max HOM05D005562 ORTHO05D007785 8.3e-203 710.3 395 90.4
Psat6g096120 Pisum sativum HOM05D005562 ORTHO05D007785 2.5e-191 672.2 394 84.0
Lj2g0016235 Lotus japonicus HOM05D005562 ORTHO05D007785 9.5e-191 670.2 394 84.3
Lalb_Chr17g0338301 Lupinus albus HOM05D005562 ORTHO05D007785 3.6e-190 668.3 395 82.8
TPR.G14865 Trifolium pratense HOM05D005562 ORTHO05D007785 8.0e-190 667.2 395 84.3
TPR.G11154 Trifolium pratense HOM05D005562 ORTHO05D007785 3.0e-189 665.2 395 84.1
Ca_12473_v3 Cicer arietinum L. HOM05D005562 ORTHO05D007785 1.5e-188 662.9 393 83.7
Medtr1g012540 Medicago truncatula HOM05D005562 ORTHO05D007785 9.8e-188 660.2 381 85.8
arahy.Tifrunner.gnm1.ann1.4TQ1KW Arachis hypogaea HOM05D005562 ORTHO05D007785 2.3e-176 622.5 422 73.9
QL11p038618 Quercus lobata HOM05D005562 ORTHO05D007785 9.5e-175 617.1 393 75.6
Cfa005417 Carpinus fangiana HOM05D005562 ORTHO05D007785 4.7e-174 614.8 394 73.9
arahy.Tifrunner.gnm1.ann1.ZFI36T Arachis hypogaea HOM05D005562 ORTHO05D007785 6.2e-174 614.4 381 78.7
Haze_01878 Corylus avellana HOM05D005562 ORTHO05D007785 6.2e-174 614.4 394 74.4
FvH4_2g07021 Fragaria vesca HOM05D005562 ORTHO05D007785 5.4e-170 601.3 394 74.9
MD00G1050500 Malus domestica HOM05D005562 ORTHO05D007785 9.2e-170 600.5 363 79.9
FAN27G1497 Fragaria x ananassa HOM05D005562 ORTHO05D007785 1.6e-169 599.7 394 74.6
TAR381G1284 Trochodendron aralioides HOM05D005562 ORTHO05D007785 3.5e-169 598.6 404 72.3
Nn1g04154 Nelumbo nucifera HOM05D005562 ORTHO05D007785 1.7e-168 596.3 404 72.3
Prupe.8G115600 Prunus persica HOM05D005562 ORTHO05D007785 3.9e-168 595.1 398 73.6
MD10G1088500 Malus domestica HOM05D005562 ORTHO05D007785 8.6e-168 594.0 362 79.8
Ciclev10028560m.g Citrus clementina HOM05D005562 ORTHO05D007785 4.3e-167 591.7 407 72.5
RcHm_v2.0_Chr6g0259381 Rosa chinensis HOM05D005562 ORTHO05D007785 4.3e-167 591.7 394 74.1
CiPaw.05G055600 Carya illinoinensis HOM05D005562 ORTHO05D007785 1.2e-166 590.1 388 73.2
MBI16_g19905_MAGBIO Magnolia biondii HOM05D005562 ORTHO05D007785 3.1e-165 585.5 356 79.2
TAR625G0430 Trochodendron aralioides HOM05D005562 ORTHO05D007785 3.1e-165 585.5 395 72.2
GSVIVG01031808001 Vitis vinifera HOM05D005562 ORTHO05D007785 1.2e-164 583.6 399 71.2
Dinv23596 Davidia involucrata HOM05D005562 ORTHO05D001378 1.5e-164 583.2 403 71.0
Atru.chr5.2830 Acer truncatum HOM05D005562 ORTHO05D007785 4.9e-163 578.2 405 70.9
MELO3C021919.2 Cucumis melo HOM05D005562 ORTHO05D007785 4.9e-163 578.2 368 76.1
Eucgr.I01182 Eucalyptus grandis HOM05D005562 ORTHO05D007785 8.4e-163 577.4 401 69.6
Thecc.02G095000 Theobroma cacao HOM05D005562 ORTHO05D007785 1.1e-162 577.0 401 69.1
Potri.004G145700 Populus trichocarpa HOM05D005562 ORTHO05D007785 2.4e-162 575.9 356 78.4
Lj9A361T59 Lonicera japonica HOM05D005562 ORTHO05D007785 4.1e-162 575.1 403 70.5
TWI79G1184 Tripterygium wilfordii HOM05D005562 ORTHO05D007785 9.2e-162 573.9 406 69.7
THA.LOC104814570 Tarenaya hassleriana HOM05D005562 ORTHO05D007785 2.7e-161 572.4 403 68.7
Aa31LG8G16860 Aethionema arabicum HOM05D005562 ORTHO05D007785 3.5e-161 572.0 399 70.2
BcaB07g31395 Brassica carinata HOM05D005562 ORTHO05D007785 4.6e-161 571.6 398 70.6
CANSAT25G3890 Cannabis sativa HOM05D005562 ORTHO05D007785 4.6e-161 571.6 359 74.1
Hma1.2p1_0584F.1_g183170 Hydrangea macrophylla HOM05D005562 ORTHO05D007785 4.6e-161 571.6 407 69.5
CsaV3_2G014210 Cucumis sativus L. HOM05D005562 ORTHO05D007785 1.3e-160 570.1 368 74.5
Gohir.D13G035800 Gossypium hirsutum HOM05D005562 ORTHO05D007785 1.3e-160 570.1 401 68.6
Gohir.A13G037500 Gossypium hirsutum HOM05D005562 ORTHO05D007785 1.7e-160 569.7 401 68.6
Manes.15G144000 Manihot esculenta HOM05D005562 ORTHO05D007785 1.7e-160 569.7 357 77.9
Cc07_g19550 Coffea canephora HOM05D005562 ORTHO05D007785 3.0e-160 568.9 352 77.3
Oeu057671.1 Olea europaea HOM05D005562 ORTHO05D007785 3.0e-160 568.9 364 75.5
Sed0010996 Sechium edule HOM05D005562 ORTHO05D007785 3.0e-160 568.9 368 75.3
BraA09t37197Z Brassica rapa HOM05D005562 ORTHO05D007785 3.9e-160 568.5 395 71.1
Duzib248G1341 Durio zibethinus HOM05D005562 ORTHO05D007785 3.9e-160 568.5 403 68.2
Aqoxy5G01421 Aquilegia oxysepala HOM05D005562 ORTHO05D007785 2.5e-159 565.8 348 76.7
A09p15570 Brassica napus HOM05D005562 ORTHO05D007785 3.3e-159 565.5 395 70.9
Migut.B00304 Erythranthe guttata HOM05D005562 ORTHO05D007785 9.6e-159 563.9 399 70.7
C09p18820 Brassica napus HOM05D005562 ORTHO05D007785 1.2e-158 563.5 349 76.8
ATR0225G001 Amborella trichopoda HOM05D005562 ORTHO05D007785 1.6e-158 563.1 356 75.3
Thhalv10023506m.g Eutrema salsugineum HOM05D005562 ORTHO05D007785 2.1e-158 562.8 394 68.8
HPP92_018726 Vanilla planifolia HOM05D005562 ORTHO05D007785 3.6e-158 562.0 368 73.9
ClCG09G017590 Citrullus lanatus HOM05D005562 ORTHO05D007785 4.7e-158 561.6 387 71.3
CAN.G322.41 Capsicum annuum HOM05D005562 ORTHO05D007785 6.2e-158 561.2 356 75.8
BcaC04g22480 Brassica carinata HOM05D005562 ORTHO05D007785 8.1e-158 560.8 349 76.5
BolC9t54784H Brassica oleracea HOM05D005562 ORTHO05D007785 8.1e-158 560.8 349 76.5
AUR62042921 Chenopodium quinoa HOM05D005562 ORTHO05D007785 8.1e-158 560.8 347 76.4
CSS0049808 Camellia sinensis var. sinensis HOM05D005562 ORTHO05D007785 1.4e-157 560.1 347 77.2
PGR142G1983 Punica granatum HOM05D005562 ORTHO05D007785 1.4e-157 560.1 378 72.8
EL10Ac1g01621 Beta vulgaris HOM05D005562 ORTHO05D007785 2.4e-157 559.3 397 68.5
Gorai.013G040500 Gossypium raimondii HOM05D005562 ORTHO05D007785 3.1e-157 558.9 427 64.9
Peaxi162Scf00016g01531 Petunia axillaris HOM05D005562 ORTHO05D007785 4.0e-157 558.5 394 70.8
Sp3g33250 Schrenkiella parvula HOM05D005562 ORTHO05D007785 6.9e-157 557.8 355 75.5
Solyc01g108660.4 Solanum lycopersicum HOM05D005562 ORTHO05D007785 6.9e-157 557.8 352 76.1
Sopen01g050880 Solanum pennellii HOM05D005562 ORTHO05D007785 6.9e-157 557.8 352 75.9
SGA_v2.0_scaffold32G13119 Striga asiatica HOM05D005562 ORTHO05D007785 6.9e-157 557.8 400 69.0
PGSC0003DMG402025903 Solanum tuberosum HOM05D005562 ORTHO05D007785 9.0e-157 557.4 352 76.4
EL10Ac3g06682 Beta vulgaris HOM05D005562 ORTHO05D007785 1.2e-156 557.0 397 69.0
Nitab4.5_0003726g0070 Nicotiana tabacum HOM05D005562 ORTHO05D007785 1.5e-156 556.6 406 68.7
AT2G19940 Arabidopsis thaliana HOM05D005562 ORTHO05D007785 1.3e-155 553.5 353 74.2
Rhsim05G0079900 Rhododendron simsii HOM05D005562 ORTHO05D007785 3.8e-155 552.0 347 75.5
DCAR_022068 Daucus carota HOM05D005562 ORTHO05D001378 6.4e-155 551.2 362 73.5
MSTRG.5375 Avicennia marina HOM05D005562 ORTHO05D007785 8.4e-155 550.8 343 77.3
CARHR110380 Cardamine hirsuta HOM05D005562 ORTHO05D007785 8.4e-155 550.8 353 74.8
PSO210G1477 Papaver somniferum HOM05D005562 ORTHO05D007785 1.4e-154 550.1 399 67.9
COL.COLO4_11726 Corchorus olitorius HOM05D005562 ORTHO05D007785 1.9e-154 549.7 333 78.1
SalBow3G1434 Salvia bowleyana HOM05D005562 ORTHO05D007785 4.2e-154 548.5 373 72.4
PSO170G1474 Papaver somniferum HOM05D005562 ORTHO05D007785 7.1e-154 547.7 399 68.4
Carub.0003s3419 Capsella rubella HOM05D005562 ORTHO05D007785 3.5e-153 545.4 403 66.5
unitig_26.g10242 Utricularia gibba HOM05D005562 ORTHO05D007785 3.5e-153 545.4 343 74.9
Zm00001eb051410 Zea mays HOM05D005562 ORTHO05D007785 2.3e-152 542.7 356 72.5
Os03g0617900 Oryza sativa ssp. japonica HOM05D005562 ORTHO05D007785 1.5e-151 540.0 356 73.0
CDE01G0106 Ceratophyllum demersum HOM05D005562 ORTHO05D007785 2.4e-149 532.7 327 77.1
Ah.13g074710 Amaranthus hybridus HOM05D005562 ORTHO05D007785 1.2e-148 530.4 397 67.3
HanXRQChr16g0528561 Helianthus annuus HOM05D005562 ORTHO05D007785 2.6e-148 529.3 371 70.4
BcaC04g19978 Brassica carinata HOM05D005562 ORTHO05D007785 7.6e-148 527.7 359 72.1
Lsat_1_v5_gn_9_108961 Lactuca sativa HOM05D005562 ORTHO05D007785 1.3e-147 526.9 363 70.5
SalBow4G0329 Salvia bowleyana HOM05D005562 ORTHO05D007785 1.3e-147 526.9 378 69.0
HanXRQChr13g0402421 Helianthus annuus HOM05D005562 ORTHO05D007785 1.7e-147 526.6 371 70.1
Os10g0494200 Oryza sativa ssp. japonica HOM05D005562 ORTHO05D007785 2.2e-147 526.2 356 71.6
Sc06g0001440 Simmondsia chinensis HOM05D005562 ORTHO05D007785 4.2e-146 521.9 314 78.3
Mapoly0036s0058 Marchantia polymorpha HOM05D005562 ORTHO05D007785 5.4e-146 521.5 344 70.6
AagrBONN_evm.TU.Sc2ySwM_117.3897 Anthoceros agrestis HOM05D005562 ORTHO05D007785 7.1e-146 521.2 377 66.3
FAN27G3443 Fragaria x ananassa HOM05D005562 ORTHO05D001378 9.3e-146 520.8 369 71.0
PGSC0003DMG401025903 Solanum tuberosum HOM05D005562 ORTHO05D007785 1.6e-145 520.0 352 72.4
Pp3c24_19140 Physcomitrium patens HOM05D005562 ORTHO05D007785 6.7e-144 514.6 355 69.6
ECA240G1421 Erigeron canadensis HOM05D005562 ORTHO05D007785 1.5e-143 513.5 344 72.4
SMO116G0475 Selaginella moellendorffii HOM05D005562 ORTHO05D007785 1.9e-143 513.1 348 72.1
BolC9t57765H Brassica oleracea HOM05D005562 ORTHO05D007785 2.5e-143 512.7 380 67.6
Nitab4.5_0001401g0050 Nicotiana tabacum HOM05D005562 ORTHO05D007785 3.3e-143 512.3 366 69.1
AL3G48260 Arabidopsis lyrata HOM05D005562 ORTHO05D007785 1.8e-141 506.5 314 76.8
CBR_g5649 Chara braunii HOM05D005562 ORTHO05D001468 3.1e-141 505.8 346 68.8
Thhalv10002012m.g Eutrema salsugineum HOM05D005562 ORTHO05D007785 4.0e-141 505.4 355 69.3
Pp3c8_22120 Physcomitrium patens HOM05D005562 ORTHO05D007785 5.3e-141 505.0 354 68.4
FAN24G3180 Fragaria x ananassa HOM05D005562 ORTHO05D001378 2.2e-139 499.6 369 68.6
Hund01581 Selenicereus undatus HOM05D005562 ORTHO05D007785 1.9e-135 486.5 463 56.6
AUR62035865 Chenopodium quinoa HOM05D005562 ORTHO05D007785 3.2e-130 469.2 572 46.3
vmacro19466 Vaccinium macrocarpon HOM05D005562 ORTHO05D007785 9.3e-130 467.6 398 61.6
PRCOL_00005741 Prasinoderma coloniale HOM05D005562 ORTHO05D007785 1.2e-129 467.2 349 64.5
Cre03.g146187 Chlamydomonas reinhardtii HOM05D005562 ORTHO05D007785 2.3e-128 463.0 371 61.2
vmacro23230 Vaccinium macrocarpon HOM05D005562 ORTHO05D007785 1.3e-126 457.2 292 75.0
FAN15G1080 Fragaria x ananassa HOM05D005562 ORTHO05D001378 3.4e-116 422.5 377 60.7
C09p49210 Brassica napus HOM05D005562 ORTHO05D007785 3.8e-115 419.1 284 72.5
Actinidia17846 Actinidia chinensis HOM05D005562 ORTHO05D007785 2.9e-70 270.0 194 68.6
Cpa.g.sc62.58 Carica papaya HOM05D005562 ORTHO05D007785 2.5e-66 256.9 147 79.6
PSO384G1669 Papaver somniferum HOM05D005562 ORTHO05D007785 1.1e-64 251.5 373 40.8
HanXRQChr10g0318401 Helianthus annuus HOM05D005562 ORTHO05D007785 2.7e-60 236.9 197 57.9
DCAR_021731 Daucus carota HOM05D005562 ORTHO05D007785 4.4e-55 219.5 273 47.6
Cpa.g.sc26.106 Carica papaya HOM05D005562 ORTHO05D007785 1.5e-50 204.5 143 69.2
Cpa.g.sc62.56 Carica papaya HOM05D005562 ORTHO05D007785 5.8e-47 192.6 190 55.3
Oeu021926.1 Olea europaea HOM05D005562 ORTHO05D007785 1.2e-41 174.9 112 75.0
Actinidia17880 Actinidia chinensis HOM05D005562 ORTHO05D007785 8.4e-38 162.2 112 69.6
arahy.Tifrunner.gnm1.ann1.Q8AXKZ Arachis hypogaea HOM05D005562 ORTHO05D007785 1.3e-35 154.8 81 85.2
Cfa027024 Carpinus fangiana HOM05D005562 ORTHO05D121372 4.0e-32 143.3 354 29.7
Actinidia17845 Actinidia chinensis HOM05D005562 ORTHO05D030745 3.3e-26 123.6 84 70.2
SEGI_28239 Sequoiadendron giganteum HOM05D005562 ORTHO05D007785 2.1e-25 120.9 66 78.8
A10p14750 Brassica napus HOM05D005562 ORTHO05D007785 1.1e-16 92.0 53 77.4
Glyma.08G079050 Glycine max HOM05D005562 ORTHO05D213306 9.0e-16 89.0 66 75.8
Glyma.08G079000 Glycine max HOM05D005562 ORTHO05D007785 8.7e-11 72.4 45 75.6
TPR.G14858 Trifolium pratense HOM05D005562 ORTHO05D410957 8.2e-09 65.9 65 56.9
CSS0029422 Camellia sinensis var. sinensis HOM05D005562 ORTHO05D111180 5.3e-08 63.2 94 40.4
TPR.G14864 Trifolium pratense HOM05D005562 ORTHO05D007785 2.0e-07 61.2 71 52.1


User provided reference genes

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