Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G004900 Phaseolus vulgaris HOM05D003933 ORTHO05D004746 8.1e-238 826.6 401 100.0
Glyma.09G282800 Glycine max HOM05D003933 ORTHO05D004746 6.0e-209 730.7 402 88.1
VMungo0251G2024 Vigna mungo HOM05D003933 ORTHO05D004746 3.0e-208 728.4 424 84.0
Lalb_Chr10g0094951 Lupinus albus HOM05D003933 ORTHO05D004746 4.8e-182 641.3 405 78.0
Lj2g0026122 Lotus japonicus HOM05D003933 ORTHO05D004746 1.1e-178 630.2 405 76.8
arahy.Tifrunner.gnm1.ann1.2XRJ77 Arachis hypogaea HOM05D003933 ORTHO05D004746 1.4e-176 623.2 407 75.7
arahy.Tifrunner.gnm1.ann1.J5HH0A Arachis hypogaea HOM05D003933 ORTHO05D004746 1.4e-176 623.2 407 75.7
Psat6g135760 Pisum sativum HOM05D003933 ORTHO05D004746 8.8e-176 620.5 405 76.3
Medtr1g037570 Medicago truncatula HOM05D003933 ORTHO05D004746 2.0e-172 609.4 405 75.6
TPR.G29790 Trifolium pratense HOM05D003933 ORTHO05D004746 2.6e-172 609.0 405 75.8
Ca_07914_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 1.1e-170 603.6 396 75.5
TAR629G2222 Trochodendron aralioides HOM05D003933 ORTHO05D004746 2.0e-159 566.2 407 69.3
Cfa008748 Carpinus fangiana HOM05D003933 ORTHO05D004746 4.8e-158 561.6 410 69.0
Atru.chr11.1157 Acer truncatum HOM05D003933 ORTHO05D004746 2.2e-155 552.7 407 67.3
Duzib132G1110 Durio zibethinus HOM05D003933 ORTHO05D004746 2.9e-155 552.4 402 67.7
QL05p009967 Quercus lobata HOM05D003933 ORTHO05D004746 5.0e-155 551.6 406 67.0
Lj6A748G52 Lonicera japonica HOM05D003933 ORTHO05D004746 8.5e-155 550.8 404 67.3
Duzib277G0001 Durio zibethinus HOM05D003933 ORTHO05D004746 1.5e-154 550.1 402 67.4
Eucgr.J00872 Eucalyptus grandis HOM05D003933 ORTHO05D004746 2.5e-154 549.3 408 68.1
Prupe.1G348200 Prunus persica HOM05D003933 ORTHO05D004746 2.5e-154 549.3 407 65.8
Ciclev10031732m.g Citrus clementina HOM05D003933 ORTHO05D004746 4.2e-154 548.5 405 67.2
MD13G1004400 Malus domestica HOM05D003933 ORTHO05D004746 1.0e-152 543.9 407 65.8
Cc11_g08880 Coffea canephora HOM05D003933 ORTHO05D004746 1.4e-152 543.5 410 66.8
PGR142G4240 Punica granatum HOM05D003933 ORTHO05D004746 5.2e-152 541.6 409 67.7
Thecc.02G159300 Theobroma cacao HOM05D003933 ORTHO05D004746 1.2e-151 540.4 403 65.8
RcHm_v2.0_Chr4g0446781 Rosa chinensis HOM05D003933 ORTHO05D004746 1.7e-150 536.6 408 65.0
Aqoxy5G00269 Aquilegia oxysepala HOM05D003933 ORTHO05D004746 2.2e-150 536.2 410 66.1
ClCG10G012050 Citrullus lanatus HOM05D003933 ORTHO05D004746 3.7e-150 535.4 406 65.3
Glyma.11G100000 Glycine max HOM05D003933 ORTHO05D004746 3.7e-150 535.4 402 69.9
Nitab4.5_0003643g0030 Nicotiana tabacum HOM05D003933 ORTHO05D004746 8.3e-150 534.3 406 65.0
CSS0045284 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 1.1e-149 533.9 407 64.6
Manes.09G017800 Manihot esculenta HOM05D003933 ORTHO05D004746 1.1e-149 533.9 408 66.7
Potri.005G092000 Populus trichocarpa HOM05D003933 ORTHO05D004746 2.4e-149 532.7 407 65.6
Gohir.A13G060600 Gossypium hirsutum HOM05D003933 ORTHO05D004746 3.1e-149 532.3 402 66.4
Nitab4.5_0000569g0090 Nicotiana tabacum HOM05D003933 ORTHO05D004746 4.1e-149 531.9 407 64.9
Rhsim09G0099700 Rhododendron simsii HOM05D003933 ORTHO05D004746 4.1e-149 531.9 407 64.6
COL.COLO4_08591 Corchorus olitorius HOM05D003933 ORTHO05D004746 7.0e-149 531.2 403 65.3
DCAR_007284 Daucus carota HOM05D003933 ORTHO05D004746 7.0e-149 531.2 408 63.7
PGSC0003DMG402011550 Solanum tuberosum HOM05D003933 ORTHO05D004746 1.2e-148 530.4 407 64.6
Manes.08G053300 Manihot esculenta HOM05D003933 ORTHO05D004746 4.5e-148 528.5 406 65.5
Gorai.013G069800 Gossypium raimondii HOM05D003933 ORTHO05D004746 1.0e-147 527.3 404 65.3
PSO063G7666 Papaver somniferum HOM05D003933 ORTHO05D004746 1.0e-147 527.3 409 65.0
Solyc12g088450.3 Solanum lycopersicum HOM05D003933 ORTHO05D004746 1.3e-147 526.9 407 64.1
ECA234G4145 Erigeron canadensis HOM05D003933 ORTHO05D004746 2.2e-147 526.2 404 63.6
CAN.G107.7 Capsicum annuum HOM05D003933 ORTHO05D004746 6.5e-147 524.6 407 64.4
Gohir.D13G061300 Gossypium hirsutum HOM05D003933 ORTHO05D004746 1.5e-146 523.5 404 64.6
Hund08600 Selenicereus undatus HOM05D003933 ORTHO05D004746 1.5e-146 523.5 407 63.6
HanXRQChr12g0377651 Helianthus annuus HOM05D003933 ORTHO05D004746 5.5e-146 521.5 404 62.9
FAN07G0849 Fragaria x ananassa HOM05D003933 ORTHO05D004746 7.2e-146 521.2 408 63.5
FvH4_4g36990 Fragaria vesca HOM05D003933 ORTHO05D004746 9.4e-146 520.8 408 63.7
THA.LOC104800863 Tarenaya hassleriana HOM05D003933 ORTHO05D004746 9.4e-146 520.8 410 64.6
CSS0043425 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 2.7e-145 519.2 407 63.6
CANSAT78G0638 Cannabis sativa HOM05D003933 ORTHO05D004746 2.7e-145 519.2 407 63.1
Aa31LG3G18300 Aethionema arabicum HOM05D003933 ORTHO05D004746 4.7e-145 518.5 407 62.2
vmacro10631 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 6.1e-145 518.1 448 59.4
PSO782G2797 Papaver somniferum HOM05D003933 ORTHO05D004746 1.8e-144 516.5 409 63.8
AUR62032977 Chenopodium quinoa HOM05D003933 ORTHO05D004746 6.8e-144 514.6 419 61.8
Haze_11764 Corylus avellana HOM05D003933 ORTHO05D004746 6.8e-144 514.6 428 61.7
TWI77G0671 Tripterygium wilfordii HOM05D003933 ORTHO05D004746 6.8e-144 514.6 411 64.7
Lsat_1_v5_gn_4_15060 Lactuca sativa HOM05D003933 ORTHO05D004746 8.8e-144 514.2 414 62.6
CsaV3_3G031790 Cucumis sativus L. HOM05D003933 ORTHO05D004746 1.5e-143 513.5 410 62.9
Lj3g0018867 Lotus japonicus HOM05D003933 ORTHO05D004746 2.6e-143 512.7 400 66.0
Sed0001276 Sechium edule HOM05D003933 ORTHO05D004746 3.4e-143 512.3 400 63.2
SGA_v2.0_scaffold38G15064 Striga asiatica HOM05D003933 ORTHO05D004746 3.4e-143 512.3 407 62.9
Actinidia14952 Actinidia chinensis HOM05D003933 ORTHO05D004746 7.5e-143 511.1 411 62.5
SalBow8G0218 Salvia bowleyana HOM05D003933 ORTHO05D004746 1.7e-142 510.0 408 62.5
Duzib248G0690 Durio zibethinus HOM05D003933 ORTHO05D004746 2.8e-142 509.2 397 62.2
MSTRG.890 Avicennia marina HOM05D003933 ORTHO05D004746 4.9e-142 508.4 421 60.6
Lj3g0001561 Lotus japonicus HOM05D003933 ORTHO05D004746 2.4e-141 506.1 400 65.8
Thhalv10004353m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 7.0e-141 504.6 405 62.0
vmacro10628 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 1.2e-140 503.8 450 58.2
Migut.L00761 Erythranthe guttata HOM05D003933 ORTHO05D004746 2.7e-140 502.7 411 60.6
MELO3C024011.2 Cucumis melo HOM05D003933 ORTHO05D004746 1.0e-139 500.7 405 61.7
BraA03t13757Z Brassica rapa HOM05D003933 ORTHO05D004746 5.0e-139 498.4 406 61.3
Sp2g23940 Schrenkiella parvula HOM05D003933 ORTHO05D004746 5.0e-139 498.4 406 62.3
AL6G34400 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 1.5e-138 496.9 406 61.3
CARHR190340 Cardamine hirsuta HOM05D003933 ORTHO05D004746 3.3e-138 495.7 411 61.6
C07p44350 Brassica napus HOM05D003933 ORTHO05D004746 4.3e-138 495.4 405 61.2
BolC7t44956H Brassica oleracea HOM05D003933 ORTHO05D004746 4.3e-138 495.4 405 61.2
AT5G23200 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 5.6e-138 495.0 407 60.9
A03p46330 Brassica napus HOM05D003933 ORTHO05D004746 7.3e-138 494.6 406 60.8
EL10Ac9g22955 Beta vulgaris HOM05D003933 ORTHO05D004746 9.5e-138 494.2 415 61.0
arahy.Tifrunner.gnm1.ann1.3AB2AC Arachis hypogaea HOM05D003933 ORTHO05D004746 1.4e-136 490.3 397 63.2
Carub.0006s2098 Capsella rubella HOM05D003933 ORTHO05D004746 1.8e-136 490.0 405 60.7
Cpa.g.sc0.130 Carica papaya HOM05D003933 ORTHO05D004746 4.0e-136 488.8 479 55.5
Os02g0634600 Oryza sativa ssp. japonica HOM05D003933 ORTHO05D004746 3.4e-135 485.7 410 60.0
arahy.Tifrunner.gnm1.ann1.E3G1QY Arachis hypogaea HOM05D003933 ORTHO05D004746 5.7e-135 485.0 397 62.5
Ca_19016_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 1.7e-134 483.4 395 64.1
VMungo1127G0010 Vigna mungo HOM05D003933 ORTHO05D004746 4.9e-134 481.9 390 64.9
CiPaw.06G061200 Carya illinoinensis HOM05D003933 ORTHO05D004746 9.2e-133 477.6 347 68.3
Peaxi162Scf00081g01011 Petunia axillaris HOM05D003933 ORTHO05D004746 1.0e-131 474.2 402 60.9
Medtr4g075120 Medicago truncatula HOM05D003933 ORTHO05D004746 1.9e-130 469.9 403 63.0
Nitab4.5_0000934g0120 Nicotiana tabacum HOM05D003933 ORTHO05D004746 1.2e-129 467.2 403 59.8
Peaxi162Scf00160g00123 Petunia axillaris HOM05D003933 ORTHO05D004746 2.8e-129 466.1 365 63.6
Hma1.2p1_0933F.1_g238310 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 1.2e-127 460.7 437 55.4
Hma1.2p1_2428F.1_g321995 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 1.2e-127 460.7 437 55.4
CAN.G1054.19 Capsicum annuum HOM05D003933 ORTHO05D004746 2.6e-127 459.5 401 58.4
ATR0618G423 Amborella trichopoda HOM05D003933 ORTHO05D004746 2.9e-126 456.1 407 58.7
Nitab4.5_0004707g0060 Nicotiana tabacum HOM05D003933 ORTHO05D004746 2.9e-126 456.1 393 61.1
CANSAT11G2660 Cannabis sativa HOM05D003933 ORTHO05D004746 6.4e-126 454.9 399 57.6
Lalb_Chr19g0139431 Lupinus albus HOM05D003933 ORTHO05D004746 9.2e-125 451.1 402 61.9
Solyc04g078160.4 Solanum lycopersicum HOM05D003933 ORTHO05D004746 2.0e-124 449.9 401 58.6
PGSC0003DMG400021516 Solanum tuberosum HOM05D003933 ORTHO05D004746 6.0e-124 448.4 400 58.0
FAN12G2057 Fragaria x ananassa HOM05D003933 ORTHO05D004746 7.8e-124 448.0 407 57.5
AL6G18670 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 2.5e-122 443.0 403 55.8
DCAR_030211 Daucus carota HOM05D003933 ORTHO05D004746 2.5e-122 443.0 370 60.5
Sopen04g031790 Solanum pennellii HOM05D003933 ORTHO05D004746 7.3e-122 441.4 409 56.2
unitig_26.g10014 Utricularia gibba HOM05D003933 ORTHO05D004746 2.6e-119 433.0 388 56.7
Thhalv10013838m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 3.4e-119 432.6 398 55.3
Lj3g0003114 Lotus japonicus HOM05D003933 ORTHO05D004746 4.1e-117 425.6 374 60.4
Lj3g0021014 Lotus japonicus HOM05D003933 ORTHO05D004746 4.1e-117 425.6 374 60.4
Lj3g0017683 Lotus japonicus HOM05D003933 ORTHO05D004746 9.2e-117 424.5 374 60.2
Sabra05G0076300 Salix brachista HOM05D003933 ORTHO05D004746 6.0e-116 421.8 335 63.0
Sp6g34690 Schrenkiella parvula HOM05D003933 ORTHO05D004746 5.1e-115 418.7 384 55.2
MBI06_g23608_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 4.3e-114 415.6 367 59.1
AT5G08270 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 2.1e-113 413.3 394 53.3
BcaB08g37269 Brassica carinata HOM05D003933 ORTHO05D004746 8.1e-113 411.4 402 53.2
TPR.G25000 Trifolium pratense HOM05D003933 ORTHO05D004746 8.1e-113 411.4 359 61.0
Gohir.A03G165000 Gossypium hirsutum HOM05D003933 ORTHO05D004746 9.9e-111 404.4 402 53.7
MBI06_g32507_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 9.9e-111 404.4 321 62.6
Potri.005G092100 Populus trichocarpa HOM05D003933 ORTHO05D004746 4.9e-110 402.1 382 54.7
Gohir.D02G188200 Gossypium hirsutum HOM05D003933 ORTHO05D004746 1.9e-109 400.2 399 52.9
HPP92_008573 Vanilla planifolia HOM05D003933 ORTHO05D004746 2.4e-109 399.8 330 60.6
Gorai.005G210900 Gossypium raimondii HOM05D003933 ORTHO05D004746 7.1e-109 398.3 399 52.9
Ca_20843_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 1.5e-106 390.6 335 60.6
Psat7g177760 Pisum sativum HOM05D003933 ORTHO05D004746 7.6e-103 378.3 342 60.2
Carub.0006s0715 Capsella rubella HOM05D003933 ORTHO05D004746 1.7e-102 377.1 359 53.5
C09p68670 Brassica napus HOM05D003933 ORTHO05D004746 6.4e-102 375.2 399 49.6
GSVIVG01026245001 Vitis vinifera HOM05D003933 ORTHO05D004746 3.2e-101 372.9 407 51.8
Zm00001eb248160 Zea mays HOM05D003933 ORTHO05D004746 2.7e-100 369.8 322 58.4
BolC9t59613H Brassica oleracea HOM05D003933 ORTHO05D004746 3.5e-100 369.4 398 49.2
SEGI_04055 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 5.1e-99 365.5 387 51.7
BraA10t44888Z Brassica rapa HOM05D003933 ORTHO05D004746 3.3e-98 362.8 398 48.5
Sopen12g030430 Solanum pennellii HOM05D003933 ORTHO05D004746 2.1e-97 360.1 254 67.3
A10p28410 Brassica napus HOM05D003933 ORTHO05D004746 2.4e-96 356.7 393 48.1
Dinv17619 Davidia involucrata HOM05D003933 ORTHO05D004746 5.4e-93 345.5 262 65.6
CSS0006186 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 2.4e-88 330.1 263 61.6
FAN17G2963 Fragaria x ananassa HOM05D003933 ORTHO05D004746 2.4e-88 330.1 273 58.2
SMO364G0332 Selaginella moellendorffii HOM05D003933 ORTHO05D004746 4.5e-87 325.9 384 47.1
Mapoly0072s0109 Marchantia polymorpha HOM05D003933 ORTHO05D004746 9.9e-87 324.7 394 44.7
CDE08G0738 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 3.2e-85 319.7 254 61.8
CSS0013970 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 1.3e-83 314.3 277 57.0
AagrBONN_evm.TU.Sc2ySwM_117.4016 Anthoceros agrestis HOM05D003933 ORTHO05D004746 4.3e-82 309.3 402 43.3
Pp3c10_5850 Physcomitrium patens HOM05D003933 ORTHO05D004746 1.6e-81 307.4 405 43.2
CSS0027256 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 4.5e-79 299.3 257 55.6
CSS0049411 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 5.8e-79 298.9 230 62.6
CARHR204870 Cardamine hirsuta HOM05D003933 ORTHO05D004746 2.7e-76 290.0 267 56.9
Sed0007936 Sechium edule HOM05D003933 ORTHO05D004746 6.7e-67 258.8 278 50.0
MD16G1003200 Malus domestica HOM05D003933 ORTHO05D004746 4.3e-66 256.1 366 43.2
Sc10g0005110 Simmondsia chinensis HOM05D003933 ORTHO05D004746 6.9e-64 248.8 194 62.4
CBR_g6576 Chara braunii HOM05D003933 ORTHO05D004746 1.3e-57 228.0 423 34.8
PGSC0003DMG400011553 Solanum tuberosum HOM05D003933 ORTHO05D004746 4.1e-56 223.0 158 64.6
SHI31071 Sapria himalayana HOM05D003933 ORTHO05D004746 2.0e-42 177.6 361 35.2
Nn7g37760 Nelumbo nucifera HOM05D003933 ORTHO05D004746 3.1e-40 170.2 134 66.4
MCO06G263 Micromonas commoda HOM05D003933 ORTHO05D004746 5.9e-39 166.0 333 33.9
Sc10g0005100 Simmondsia chinensis HOM05D003933 ORTHO05D004746 3.8e-38 163.3 132 65.2
Oeu044350.1 Olea europaea HOM05D003933 ORTHO05D004746 1.5e-37 161.4 136 63.2
CDE08G1244 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 2.8e-33 147.1 134 59.0
COL.COLO4_20883 Corchorus olitorius HOM05D003933 ORTHO05D004746 1.7e-30 137.9 99 60.6
Cre02.g086076 Chlamydomonas reinhardtii HOM05D003933 ORTHO05D004746 2.5e-29 134.0 327 27.8
C02p60970 Brassica napus HOM05D003933 ORTHO05D004746 1.4e-27 128.3 226 37.2
BcaC03g18034 Brassica carinata HOM05D003933 ORTHO05D004746 1.8e-27 127.9 375 31.2
C06p10890 Brassica napus HOM05D003933 ORTHO05D004746 3.4e-26 123.6 226 36.3
Dinv17620 Davidia involucrata HOM05D003933 ORTHO05D028341 3.8e-22 110.2 68 80.9
A02p41110 Brassica napus HOM05D003933 ORTHO05D004746 3.6e-20 103.6 134 41.8
MBI06_g42297_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 6.4e-17 92.8 123 46.3
SEGI_32331 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 3.2e-16 90.5 100 50.0
CARHR204860 Cardamine hirsuta HOM05D003933 ORTHO05D004746 6.6e-14 82.8 66 59.1
Psat7g177720 Pisum sativum HOM05D003933 ORTHO05D004746 5.8e-10 69.7 42 83.3
COL.COLO4_20881 Corchorus olitorius HOM05D003933 ORTHO05D004746 1.3e-09 68.6 63 55.6
BolC2t12147H Brassica oleracea HOM05D003933 ORTHO05D028341 6.4e-09 66.2 45 73.3
PGSC0003DMG401019957 Solanum tuberosum HOM05D003933 ORTHO05D004746 6.4e-09 66.2 66 51.5
BcaC03g13212 Brassica carinata HOM05D003933 ORTHO05D004746 1.7e-06 58.2 135 33.3


User provided reference genes

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