Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G333700 Phaseolus vulgaris HOM05D006904 ORTHO05D008439 1.1e-156 556.6 294 100.0
VMungo1309G0432 Vigna mungo HOM05D006904 ORTHO05D008439 1.1e-135 486.9 294 87.4
Glyma.09G286200 Glycine max HOM05D006904 ORTHO05D008439 1.7e-128 463.0 294 82.3
Lj2g0027548 Lotus japonicus HOM05D006904 ORTHO05D008439 5.2e-101 371.7 298 68.5
Medtr3g005290 Medicago truncatula HOM05D006904 ORTHO05D008439 1.2e-97 360.5 281 67.6
Ca_13963_v3 Cicer arietinum L. HOM05D006904 ORTHO05D008439 3.3e-95 352.4 292 67.1
arahy.Tifrunner.gnm1.ann1.U3Q9D7 Arachis hypogaea HOM05D006904 ORTHO05D008439 1.8e-93 346.7 302 63.9
arahy.Tifrunner.gnm1.ann1.NJ37M5 Arachis hypogaea HOM05D006904 ORTHO05D008439 9.2e-90 334.3 318 60.7
Psat1g000400 Pisum sativum HOM05D006904 ORTHO05D008439 5.0e-88 328.6 271 66.4
TPR.G25509 Trifolium pratense HOM05D006904 ORTHO05D008439 2.0e-84 316.6 305 60.3
Cfa011933 Carpinus fangiana HOM05D006904 ORTHO05D008439 4.3e-79 298.9 283 60.1
TWI81G0826 Tripterygium wilfordii HOM05D006904 ORTHO05D008439 8.1e-78 294.7 275 58.5
Ciclev10021179m.g Citrus clementina HOM05D006904 ORTHO05D008439 5.2e-77 292.0 275 58.2
Haze_09157 Corylus avellana HOM05D006904 ORTHO05D008439 5.2e-77 292.0 287 57.8
Potri.001G084500 Populus trichocarpa HOM05D006904 ORTHO05D008439 8.9e-77 291.2 267 60.7
COL.COLO4_10787 Corchorus olitorius HOM05D006904 ORTHO05D008439 1.5e-76 290.4 285 56.1
Haze_09163 Corylus avellana HOM05D006904 ORTHO05D008439 2.6e-76 289.7 261 61.7
TAR629G0561 Trochodendron aralioides HOM05D006904 ORTHO05D008439 1.7e-75 287.0 292 55.5
MD14G1125000 Malus domestica HOM05D006904 ORTHO05D008439 2.9e-75 286.2 251 62.5
MD06G1117600 Malus domestica HOM05D006904 ORTHO05D008439 3.8e-75 285.8 250 61.6
Thecc.03G222200 Theobroma cacao HOM05D006904 ORTHO05D008439 1.4e-74 283.9 280 57.9
CAN.G567.78 Capsicum annuum HOM05D006904 ORTHO05D008439 4.1e-74 282.3 267 58.4
Nitab4.5_0004251g0070 Nicotiana tabacum HOM05D006904 ORTHO05D008439 5.4e-74 282.0 260 60.0
QL02p029228 Quercus lobata HOM05D006904 ORTHO05D008439 7.8e-73 278.1 295 54.2
Sopen08g031220 Solanum pennellii HOM05D006904 ORTHO05D008439 1.0e-72 277.7 263 57.4
Solyc08g083010.3 Solanum lycopersicum HOM05D006904 ORTHO05D008439 2.3e-72 276.6 263 57.4
PGSC0003DMG400012243 Solanum tuberosum HOM05D006904 ORTHO05D008439 2.3e-72 276.6 252 59.5
MBI04_g44912_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 3.0e-72 276.2 284 57.4
Gohir.D12G240700 Gossypium hirsutum HOM05D006904 ORTHO05D008439 3.9e-72 275.8 268 57.1
Gorai.008G257800 Gossypium raimondii HOM05D006904 ORTHO05D008439 3.9e-72 275.8 268 57.1
RcHm_v2.0_Chr7g0186801 Rosa chinensis HOM05D006904 ORTHO05D008439 5.1e-72 275.4 261 57.5
Actinidia04169 Actinidia chinensis HOM05D006904 ORTHO05D008439 1.1e-71 274.2 266 54.9
Gohir.A12G239500 Gossypium hirsutum HOM05D006904 ORTHO05D008439 5.6e-71 271.9 268 56.7
Atru.chr9.1900 Acer truncatum HOM05D006904 ORTHO05D008439 9.6e-71 271.2 240 63.8
Aqoxy5G04256 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 9.6e-71 271.2 259 57.1
Prupe.5G128700 Prunus persica HOM05D006904 ORTHO05D008439 1.6e-70 270.4 294 54.4
Rhsim02G0251400 Rhododendron simsii HOM05D006904 ORTHO05D008439 3.6e-70 269.2 271 57.2
vmacro11509 Vaccinium macrocarpon HOM05D006904 ORTHO05D008439 1.4e-69 267.3 281 55.2
ClCG10G000840 Citrullus lanatus HOM05D006904 ORTHO05D008439 2.4e-69 266.5 265 58.1
CSS0028351 Camellia sinensis var. sinensis HOM05D006904 ORTHO05D008439 1.2e-68 264.2 268 56.0
Lj8A201G80 Lonicera japonica HOM05D006904 ORTHO05D008439 1.2e-68 264.2 245 58.0
GSVIVG01019640001 Vitis vinifera HOM05D006904 ORTHO05D008439 1.5e-68 263.8 259 56.0
PSO675G2501 Papaver somniferum HOM05D006904 ORTHO05D008439 3.4e-68 262.7 262 55.0
Sabra01G0061300 Salix brachista HOM05D006904 ORTHO05D008439 5.8e-68 261.9 310 51.3
Dinv02287 Davidia involucrata HOM05D006904 ORTHO05D008439 7.6e-68 261.5 325 50.2
FAN04G1837 Fragaria x ananassa HOM05D006904 ORTHO05D008439 1.7e-67 260.4 261 55.2
Oeu010740.1 Olea europaea HOM05D006904 ORTHO05D008439 2.2e-67 260.0 244 57.8
MBI04_g21743_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 6.4e-67 258.5 243 60.1
MSTRG.24864 Avicennia marina HOM05D006904 ORTHO05D008439 1.4e-66 257.3 284 51.8
FAN13G1638 Fragaria x ananassa HOM05D006904 ORTHO05D008439 1.4e-66 257.3 261 55.2
Nitab4.5_0007063g0060 Nicotiana tabacum HOM05D006904 ORTHO05D008439 1.9e-66 256.9 251 57.8
FvH4_5g11010 Fragaria vesca HOM05D006904 ORTHO05D008439 9.3e-66 254.6 261 54.4
FAN18G2239 Fragaria x ananassa HOM05D006904 ORTHO05D008439 9.3e-66 254.6 261 54.4
Sc01g0010610 Simmondsia chinensis HOM05D006904 ORTHO05D008439 1.6e-65 253.8 259 52.9
Peaxi162Scf00074g00356 Petunia axillaris HOM05D006904 ORTHO05D008439 1.0e-64 251.1 243 57.6
THA.LOC104813055 Tarenaya hassleriana HOM05D006904 ORTHO05D008439 1.7e-64 250.4 270 52.6
Ah.12g053150 Amaranthus hybridus HOM05D006904 ORTHO05D008439 5.1e-64 248.8 281 50.5
ECA233G3570 Erigeron canadensis HOM05D006904 ORTHO05D008439 5.1e-64 248.8 248 54.4
EL10Ac5g12440 Beta vulgaris HOM05D006904 ORTHO05D008439 1.9e-63 246.9 251 52.2
Migut.A01096 Erythranthe guttata HOM05D006904 ORTHO05D008439 7.3e-63 245.0 310 46.5
PSO541G0496 Papaver somniferum HOM05D006904 ORTHO05D008439 9.6e-63 244.6 261 52.1
HanXRQChr07g0192161 Helianthus annuus HOM05D006904 ORTHO05D008439 2.1e-62 243.4 276 50.0
Hma1.2p1_0456F.1_g156570 Hydrangea macrophylla HOM05D006904 ORTHO05D008439 2.1e-62 243.4 250 55.6
Cc08_g16680 Coffea canephora HOM05D006904 ORTHO05D008439 3.6e-62 242.7 266 50.4
CiPaw.12G078200 Carya illinoinensis HOM05D006904 ORTHO05D008439 1.2e-60 237.7 295 49.8
Hund11354 Selenicereus undatus HOM05D006904 ORTHO05D008439 1.2e-60 237.7 280 49.3
Eucgr.E01035 Eucalyptus grandis HOM05D006904 ORTHO05D008439 2.0e-60 236.9 264 50.8
AT4G24090 Arabidopsis thaliana HOM05D006904 ORTHO05D008439 4.5e-60 235.7 254 53.5
AL7G29200 Arabidopsis lyrata HOM05D006904 ORTHO05D008439 7.6e-60 235.0 250 54.4
Duzib205G0314 Durio zibethinus HOM05D006904 ORTHO05D008439 1.7e-59 233.8 264 52.3
BcaNung01113 Brassica carinata HOM05D006904 ORTHO05D008439 2.2e-59 233.4 258 52.3
BcaC09g50912 Brassica carinata HOM05D006904 ORTHO05D008439 2.9e-59 233.0 250 52.8
C01p19310 Brassica napus HOM05D000458 ORTHO05D000951 2.9e-59 233.0 250 52.8
BolC1t01857H Brassica oleracea HOM05D000458 ORTHO05D000951 2.9e-59 233.0 250 52.8
A01p15360 Brassica napus HOM05D000458 ORTHO05D000951 4.9e-59 232.3 250 52.4
BraA01t01480Z Brassica rapa HOM05D006904 ORTHO05D008439 8.4e-59 231.5 250 52.4
ATR0620G017 Amborella trichopoda HOM05D006904 ORTHO05D008439 1.4e-58 230.7 269 46.8
AUR62007044 Chenopodium quinoa HOM05D006904 ORTHO05D008439 1.9e-58 230.3 255 51.0
Carub.0007s1701 Capsella rubella HOM05D006904 ORTHO05D008439 3.2e-58 229.6 250 52.0
Thhalv10025762m.g Eutrema salsugineum HOM05D006904 ORTHO05D008439 5.4e-58 228.8 254 51.6
CDE09G0165 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 9.3e-58 228.0 249 53.0
SGA_v2.0_scaffold104G30265 Striga asiatica HOM05D006904 ORTHO05D008439 1.6e-57 227.3 297 47.1
Haze_16434 Corylus avellana HOM05D006904 ORTHO05D008439 3.5e-57 226.1 233 57.1
CDE11G0025 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 6.0e-57 225.3 249 52.6
MELO3C013778.2 Cucumis melo HOM05D006904 ORTHO05D008439 3.0e-56 223.0 270 51.1
CsaV3_3G000910 Cucumis sativus L. HOM05D006904 ORTHO05D008439 3.0e-56 223.0 265 51.7
Lsat_1_v5_gn_6_9180 Lactuca sativa HOM05D000482 ORTHO05D000349 5.1e-56 222.2 234 52.6
Aa31LG6G7300 Aethionema arabicum HOM05D006904 ORTHO05D008439 9.6e-55 218.0 250 49.6
Sp7g22050 Schrenkiella parvula HOM05D006904 ORTHO05D008439 4.8e-54 215.7 254 49.2
Sed0025618 Sechium edule HOM05D006904 ORTHO05D008439 4.8e-54 215.7 232 54.7
PGR042G3610 Punica granatum HOM05D006904 ORTHO05D008439 2.0e-52 210.3 263 49.4
Haze_14079 Corylus avellana HOM05D006904 ORTHO05D008439 1.1e-50 204.5 223 55.2
CANSAT21G0222 Cannabis sativa HOM05D006904 ORTHO05D008439 1.4e-50 204.1 296 45.6
DCAR_006536 Daucus carota HOM05D006904 ORTHO05D008439 2.4e-50 203.4 246 48.0
Manes.02G003600 Manihot esculenta HOM05D006904 ORTHO05D008439 4.5e-44 182.6 225 48.4
AUR62019908 Chenopodium quinoa HOM05D006904 ORTHO05D008439 1.3e-43 181.0 250 43.6
HPP92_025869 Vanilla planifolia HOM05D006904 ORTHO05D008439 3.2e-42 176.4 250 43.2
unitig_88.g27646 Utricularia gibba HOM05D006904 ORTHO05D008439 6.0e-41 172.2 271 41.0
SalBow8G2695 Salvia bowleyana HOM05D006904 ORTHO05D008439 5.1e-40 169.1 265 40.8
Os09g0529350 Oryza sativa ssp. japonica HOM05D006904 ORTHO05D008439 1.8e-37 160.6 183 47.5
CARHR231490 Cardamine hirsuta HOM05D006904 ORTHO05D008439 4.1e-37 159.5 183 49.2
Cpa.g.sc175.18 Carica papaya HOM05D006904 ORTHO05D008439 4.5e-36 156.0 148 61.5
SEGI_29366 Sequoiadendron giganteum HOM05D006904 ORTHO05D008439 1.3e-35 154.5 209 45.5
Zm00001eb319140 Zea mays HOM05D006904 ORTHO05D008439 6.5e-35 152.1 245 40.0
Pp3c9_20020 Physcomitrium patens HOM05D006904 ORTHO05D008439 2.5e-34 150.2 263 37.3
Nn5g30646 Nelumbo nucifera HOM05D006904 ORTHO05D008439 6.7e-32 142.1 116 62.9
ECA246G4131 Erigeron canadensis HOM05D006904 ORTHO05D008439 1.5e-31 141.0 253 37.9
Aqoxy5G04252 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 9.1e-29 131.7 148 50.0
HanXRQChr06g0166841 Helianthus annuus HOM05D006904 ORTHO05D008439 1.4e-26 124.4 209 38.3
Lsat_1_v5_gn_3_13720 Lactuca sativa HOM05D006904 ORTHO05D008439 7.2e-26 122.1 221 36.2
QL02p029244 Quercus lobata HOM05D006904 ORTHO05D008439 2.0e-20 104.0 133 48.9
Mapoly0033s0090 Marchantia polymorpha HOM05D006904 ORTHO05D008439 1.9e-18 97.4 297 27.6
SMO361G0353 Selaginella moellendorffii HOM05D006904 ORTHO05D008439 5.5e-18 95.9 139 36.7
AagrBONN_evm.TU.Sc2ySwM_228.3172 Anthoceros agrestis HOM05D006904 ORTHO05D008439 1.6e-17 94.4 275 29.8
MCO05G331 Micromonas commoda HOM05D006904 ORTHO05D008439 3.0e-16 90.1 257 30.4
CBR_g70738 Chara braunii HOM05D006904 ORTHO05D008439 8.2e-14 82.0 280 27.1
BcaC09g50913 Brassica carinata HOM05D006904 ORTHO05D008439 4.1e-13 79.7 73 60.3
Cre02.g144850 Chlamydomonas reinhardtii HOM05D006904 ORTHO05D008439 2.3e-08 63.9 250 29.6
AUR62041665 Chenopodium quinoa HOM05D006904 ORTHO05D008439 3.0e-08 63.5 61 55.7
Aa31LG6G7320 Aethionema arabicum HOM05D003846 ORTHO05D004726 2.2e-06 57.4 150 34.7


User provided reference genes

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