Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G330100 Phaseolus vulgaris HOM05D007068 ORTHO05D008590 2.1e-214 748.8 399 100.0
VMungo0251G0101 Vigna mungo HOM05D007068 ORTHO05D008590 1.6e-166 589.7 397 77.3
Glyma.08G054400 Glycine max HOM05D007068 ORTHO05D008590 1.1e-133 480.7 401 64.3
Lj4g0019727 Lotus japonicus HOM05D007068 ORTHO05D008590 1.4e-93 347.4 404 51.7
Ca_17189_v3 Cicer arietinum L. HOM05D007068 ORTHO05D008590 3.2e-93 346.3 413 50.8
Medtr8g107330 Medicago truncatula HOM05D007068 ORTHO05D008590 3.3e-90 336.3 412 50.5
Lalb_Chr16g0386991 Lupinus albus HOM05D007068 ORTHO05D008590 7.3e-90 335.1 427 48.7
Psat7g003560 Pisum sativum HOM05D007068 ORTHO05D008590 1.2e-89 334.3 408 47.8
TPR.G1401 Trifolium pratense HOM05D007068 ORTHO05D008590 2.1e-73 280.4 421 44.2
arahy.Tifrunner.gnm1.ann1.N01HH5 Arachis hypogaea HOM05D007068 ORTHO05D008590 1.8e-72 277.3 505 40.6
arahy.Tifrunner.gnm1.ann1.ZH8P6D Arachis hypogaea HOM05D007068 ORTHO05D008590 1.2e-68 264.6 543 37.6
Thecc.03G056900 Theobroma cacao HOM05D007068 ORTHO05D008590 1.1e-56 224.9 440 36.8
CiPaw.16G093400 Carya illinoinensis HOM05D007068 ORTHO05D008590 2.0e-55 220.7 459 36.4
Cfa019656 Carpinus fangiana HOM05D007068 ORTHO05D008590 4.5e-55 219.5 461 35.8
Eucgr.K02273 Eucalyptus grandis HOM05D007068 ORTHO05D008590 8.4e-54 215.3 479 34.2
Atru.chr9.1734 Acer truncatum HOM05D007068 ORTHO05D008590 1.1e-53 214.9 446 33.9
CANSAT80G0386 Cannabis sativa HOM05D007068 ORTHO05D008590 7.9e-52 208.8 432 35.2
Duzib084G0836 Durio zibethinus HOM05D007068 ORTHO05D008590 1.0e-51 208.4 439 35.1
Hma1.2p1_0669F.1_g200120 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 2.3e-51 207.2 492 32.1
Prupe.5G233500 Prunus persica HOM05D007068 ORTHO05D008590 1.1e-50 204.9 278 45.7
COL.COLO4_04377 Corchorus olitorius HOM05D007068 ORTHO05D008590 5.7e-50 202.6 452 33.4
Sed0003101 Sechium edule HOM05D007068 ORTHO05D008590 6.3e-49 199.1 397 36.3
QL10p029594 Quercus lobata HOM05D007068 ORTHO05D008590 2.4e-48 197.2 422 34.6
Dinv17551 Davidia involucrata HOM05D007068 ORTHO05D008590 2.0e-47 194.1 420 36.9
Haze_18849 Corylus avellana HOM05D007068 ORTHO05D008590 2.6e-47 193.7 497 32.4
GSVIVG01011540001 Vitis vinifera HOM05D007068 ORTHO05D008590 3.2e-45 186.8 435 33.3
RcHm_v2.0_Chr7g0178441 Rosa chinensis HOM05D007068 ORTHO05D008590 4.2e-45 186.4 221 53.4
Nn3g18277 Nelumbo nucifera HOM05D007068 ORTHO05D008590 7.2e-45 185.7 430 35.1
Actinidia39838 Actinidia chinensis HOM05D007068 ORTHO05D008590 1.6e-44 184.5 469 32.4
Aa31LG10G5220 Aethionema arabicum HOM05D007068 ORTHO05D008590 2.1e-44 184.1 464 31.2
CsaV3_1G004370 Cucumis sativus L. HOM05D007068 ORTHO05D008590 3.6e-44 183.3 396 35.6
Gohir.D07G066400 Gossypium hirsutum HOM05D007068 ORTHO05D008590 3.6e-44 183.3 447 32.0
VMungo0251G0567 Vigna mungo HOM05D007068 ORTHO05D008590 6.1e-44 182.6 206 44.7
MELO3C017359.2 Cucumis melo HOM05D007068 ORTHO05D008590 7.9e-44 182.2 397 35.8
Carub.0001s3769 Capsella rubella HOM05D007068 ORTHO05D008590 1.4e-43 181.4 461 30.4
Gorai.001G070000 Gossypium raimondii HOM05D007068 ORTHO05D008590 1.4e-43 181.4 449 31.6
AL1G55220 Arabidopsis lyrata HOM05D007068 ORTHO05D008590 1.8e-43 181.0 459 30.9
Potri.012G047000 Populus trichocarpa HOM05D007068 ORTHO05D008590 1.8e-43 181.0 400 33.0
Gohir.A07G061700 Gossypium hirsutum HOM05D007068 ORTHO05D008590 3.0e-43 180.3 442 31.2
Rhsim08G0124500 Rhododendron simsii HOM05D007068 ORTHO05D008590 1.5e-42 177.9 453 31.8
CAN.G843.56 Capsicum annuum HOM05D007068 ORTHO05D008590 4.3e-42 176.4 246 41.9
SalBow1G5613 Salvia bowleyana HOM05D007068 ORTHO05D008590 4.3e-42 176.4 255 42.0
CSS0009831 Camellia sinensis var. sinensis HOM05D007068 ORTHO05D008590 7.4e-42 175.6 466 33.7
BcaB07g33743 Brassica carinata HOM05D007068 ORTHO05D008590 9.7e-42 175.3 468 30.8
FvH4_5g17330 Fragaria vesca HOM05D007068 ORTHO05D008590 9.7e-42 175.3 276 44.6
FAN18G2889 Fragaria x ananassa HOM05D007068 ORTHO05D008590 9.7e-42 175.3 276 44.6
FAN04G2769 Fragaria x ananassa HOM05D007068 ORTHO05D008590 1.3e-41 174.9 262 44.3
MD06G1227000 Malus domestica HOM05D007068 ORTHO05D008590 1.3e-41 174.9 265 43.8
Sp1g35530 Schrenkiella parvula HOM05D007068 ORTHO05D008590 1.3e-41 174.9 460 29.1
TAR622G0435 Trochodendron aralioides HOM05D007068 ORTHO05D008590 1.3e-41 174.9 396 33.6
Solyc03g118700.3 Solanum lycopersicum HOM05D007068 ORTHO05D008590 4.8e-41 172.9 250 40.4
CARHR038180 Cardamine hirsuta HOM05D007068 ORTHO05D008590 6.3e-41 172.6 460 30.7
FAN13G0457 Fragaria x ananassa HOM05D007068 ORTHO05D008590 8.2e-41 172.2 219 51.1
A06p04350 Brassica napus HOM05D007068 ORTHO05D008590 1.4e-40 171.4 450 30.0
Oeu031766.1 Olea europaea HOM05D007068 ORTHO05D008590 1.4e-40 171.4 476 29.4
PGSC0003DMG400005672 Solanum tuberosum HOM05D007068 ORTHO05D008590 4.1e-40 169.9 457 31.1
AT1G48580 Arabidopsis thaliana HOM05D007068 ORTHO05D008590 9.1e-40 168.7 460 29.6
Sabra12G0033000 Salix brachista HOM05D007068 ORTHO05D008590 1.2e-39 168.3 427 31.6
ECA238G2622 Erigeron canadensis HOM05D007068 ORTHO05D008590 1.5e-39 167.9 326 34.0
Thhalv10011472m.g Eutrema salsugineum HOM05D007068 ORTHO05D008590 3.4e-39 166.8 457 30.0
ClCG06G014310 Citrullus lanatus HOM05D007068 ORTHO05D008590 4.5e-39 166.4 401 32.2
Aqoxy3G00060 Aquilegia oxysepala HOM05D007068 ORTHO05D008590 5.9e-39 166.0 470 30.4
PSO478G2297 Papaver somniferum HOM05D007068 ORTHO05D008590 2.9e-38 163.7 466 30.0
SGA_v2.0_scaffold36G14383 Striga asiatica HOM05D007068 ORTHO05D008590 8.5e-38 162.2 453 29.6
Peaxi162Scf00683g00453 Petunia axillaris HOM05D007068 ORTHO05D008590 1.1e-37 161.8 455 29.5
C06p03180 Brassica napus HOM05D007068 ORTHO05D008590 1.9e-37 161.0 467 29.8
Migut.D01541 Erythranthe guttata HOM05D007068 ORTHO05D008590 7.2e-37 159.1 480 31.5
BcaC08g43059 Brassica carinata HOM05D007068 ORTHO05D008590 1.6e-36 157.9 471 28.9
BolC6t35436H Brassica oleracea HOM05D007068 ORTHO05D008590 1.6e-36 157.9 471 28.9
BraA06t23639Z Brassica rapa HOM05D007068 ORTHO05D008590 1.6e-36 157.9 484 28.9
DCAR_014504 Daucus carota HOM05D007068 ORTHO05D008590 1.6e-36 157.9 444 27.9
Cc04_g06260 Coffea canephora HOM05D007068 ORTHO05D008590 3.6e-36 156.8 476 28.8
Nitab4.5_0003401g0040 Nicotiana tabacum HOM05D007068 ORTHO05D008590 3.6e-36 156.8 246 39.8
Nitab4.5_0004556g0050 Nicotiana tabacum HOM05D007068 ORTHO05D008590 6.1e-36 156.0 303 36.0
Cpa.g.sc3.397 Carica papaya HOM05D007068 ORTHO05D008590 3.9e-35 153.3 437 31.1
EL10Ac4g08480 Beta vulgaris HOM05D007068 ORTHO05D008590 5.1e-35 152.9 271 38.0
Hma1.2p1_0669F.1_g200130 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 2.0e-34 151.0 490 29.4
Lsat_1_v5_gn_2_14700 Lactuca sativa HOM05D007068 ORTHO05D008590 3.3e-34 150.2 468 29.5
PSO017G3869 Papaver somniferum HOM05D007068 ORTHO05D008590 7.4e-34 149.1 467 28.9
HPP92_002012 Vanilla planifolia HOM05D007068 ORTHO05D008590 3.7e-33 146.7 185 41.1
AUR62037972 Chenopodium quinoa HOM05D007068 ORTHO05D008590 2.6e-31 140.6 147 50.3
Ah.06g187490 Amaranthus hybridus HOM05D007068 ORTHO05D008590 5.9e-31 139.4 199 41.7
Manes.14G171300 Manihot esculenta HOM05D007068 ORTHO05D008590 3.8e-30 136.7 467 28.1
MBI13_g47078_MAGBIO Magnolia biondii HOM05D007068 ORTHO05D008590 6.5e-30 136.0 249 34.9
Peaxi162Scf00683g00454 Petunia axillaris HOM05D007068 ORTHO05D008590 2.7e-28 130.6 450 27.1
ATR0618G302 Amborella trichopoda HOM05D007068 ORTHO05D008590 3.6e-28 130.2 198 39.4
Hund10357 Selenicereus undatus HOM05D007068 ORTHO05D008590 4.7e-28 129.8 248 37.5
Zm00001eb304630 Zea mays HOM05D007068 ORTHO05D008590 6.7e-27 125.9 298 32.6
SMO164G0186 Selaginella moellendorffii HOM05D007068 ORTHO05D008590 2.8e-25 120.6 164 38.4
Mapoly0060s0110 Marchantia polymorpha HOM05D007068 ORTHO05D008590 1.0e-22 112.1 163 35.0
Ciclev10008793m.g Citrus clementina HOM05D007068 ORTHO05D008590 6.5e-22 109.4 95 54.7
HanXRQChr14g0431751 Helianthus annuus HOM05D007068 ORTHO05D008590 8.5e-22 109.0 90 60.0
Sc10g0009180 Simmondsia chinensis HOM05D007068 ORTHO05D008590 2.5e-21 107.5 186 38.7
SMO164G0105 Selaginella moellendorffii HOM05D020476 ORTHO05D008590 2.1e-20 104.4 154 37.7
Sopen03g037660 Solanum pennellii HOM05D007068 ORTHO05D008590 3.6e-20 103.6 206 36.4
CDE02G3810 Ceratophyllum demersum HOM05D007068 ORTHO05D008590 4.4e-18 96.7 146 37.7
SEGI_36605 Sequoiadendron giganteum HOM05D007068 ORTHO05D008590 3.7e-17 93.6 88 47.7
Pp3c3_22100 Physcomitrium patens HOM05D007068 ORTHO05D008590 3.8e-14 83.6 129 36.4
Pp3c3_22103 Physcomitrium patens HOM05D007068 ORTHO05D008590 3.8e-14 83.6 129 36.4
FAN08G2700 Fragaria x ananassa HOM05D007068 ORTHO05D008590 1.6e-12 78.2 106 42.5
vmacro17572 Vaccinium macrocarpon HOM05D007068 ORTHO05D008590 3.6e-12 77.0 83 50.6
AagrBONN_evm.TU.Sc2ySwM_362.2609 Anthoceros agrestis HOM05D007068 ORTHO05D008590 6.1e-12 76.3 137 35.0
arahy.Tifrunner.gnm1.ann1.USF1F6 Arachis hypogaea HOM05D007068 ORTHO05D008590 1.4e-11 75.1 56 64.3
VMungo1215G1321 Vigna mungo HOM05D007068 ORTHO05D008590 1.8e-11 74.7 78 44.9
unitig_8.g4506 Utricularia gibba HOM05D007068 ORTHO05D008590 3.7e-09 67.0 204 30.4
VMungo0251G2390 Vigna mungo HOM05D007068 ORTHO05D008590 4.9e-09 66.6 103 32.0
VMungo0720G2542 Vigna mungo HOM05D059265 ORTHO05D008590 2.4e-08 64.3 115 30.4


User provided reference genes

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