Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G327300 Phaseolus vulgaris HOM05D002209 ORTHO05D007926 8.3e-140 500.4 253 100.0
VMungo0251G3506 Vigna mungo HOM05D002209 ORTHO05D007926 1.8e-134 482.6 253 96.0
Glyma.05G243600 Glycine max HOM05D002209 ORTHO05D007926 1.9e-128 462.6 254 92.9
Glyma.08G051400 Glycine max HOM05D002209 ORTHO05D007926 1.2e-125 453.4 253 90.5
Lj4g0023570 Lotus japonicus HOM05D002209 ORTHO05D007926 1.2e-117 426.8 246 87.0
Medtr8g106740 Medicago truncatula HOM05D002209 ORTHO05D007926 2.9e-116 422.2 246 84.1
TPR.G12761 Trifolium pratense HOM05D002209 ORTHO05D007926 1.5e-109 399.8 247 80.6
arahy.Tifrunner.gnm1.ann1.IWL1UH Arachis hypogaea HOM05D002209 ORTHO05D007926 3.4e-109 398.7 252 80.2
Lalb_Chr09g0330531 Lupinus albus HOM05D002209 ORTHO05D007926 3.4e-109 398.7 251 80.1
arahy.Tifrunner.gnm1.ann1.7LX2IS Arachis hypogaea HOM05D002209 ORTHO05D007926 1.6e-106 389.8 254 77.6
arahy.Tifrunner.gnm1.ann1.X5TZ4V Arachis hypogaea HOM05D002209 ORTHO05D007926 1.8e-105 386.3 248 78.6
arahy.Tifrunner.gnm1.ann1.A2QZNW Arachis hypogaea HOM05D002209 ORTHO05D007926 1.6e-103 379.8 248 77.4
Cfa019698 Carpinus fangiana HOM05D002209 ORTHO05D007926 4.2e-99 365.2 250 73.2
Ca_14628_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 6.0e-98 361.3 244 76.2
Manes.14G168500 Manihot esculenta HOM05D002209 ORTHO05D007926 1.0e-97 360.5 253 73.1
Atru.chr9.948 Acer truncatum HOM05D002209 ORTHO05D007926 1.8e-97 359.8 246 73.6
QL10p027511 Quercus lobata HOM05D002209 ORTHO05D007926 3.0e-97 359.0 255 72.9
MELO3C002120.2 Cucumis melo HOM05D002209 ORTHO05D007926 5.1e-97 358.2 250 70.4
CsaV3_1G007020 Cucumis sativus L. HOM05D002209 ORTHO05D007926 5.1e-97 358.2 250 70.4
Thecc.06G020700 Theobroma cacao HOM05D002209 ORTHO05D007926 1.9e-96 356.3 249 71.5
Sopen00g010550 Solanum pennellii HOM05D002209 ORTHO05D007926 3.7e-95 352.1 248 70.2
Duzib160G0876 Durio zibethinus HOM05D002209 ORTHO05D007926 8.2e-95 350.9 249 70.7
Lalb_Chr16g0387151 Lupinus albus HOM05D002209 ORTHO05D007926 8.2e-95 350.9 221 80.5
Nitab4.5_0012369g0010 Nicotiana tabacum HOM05D002209 ORTHO05D007926 8.2e-95 350.9 247 70.0
Peaxi162Scf00683g10026 Petunia axillaris HOM05D002209 ORTHO05D007926 1.1e-94 350.5 247 69.6
ClCG04G010780 Citrullus lanatus HOM05D002209 ORTHO05D007926 1.4e-94 350.1 246 69.5
Potri.015G041800 Populus trichocarpa HOM05D002209 ORTHO05D007926 1.4e-94 350.1 249 71.1
PGSC0003DMG400005659 Solanum tuberosum HOM05D002209 ORTHO05D007926 2.4e-94 349.4 248 69.8
CSS0012934 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 3.1e-94 349.0 257 70.0
CSS0018698 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 3.1e-94 349.0 257 70.0
CiPaw.15G139100 Carya illinoinensis HOM05D002209 ORTHO05D007926 6.9e-94 347.8 245 73.1
Ciclev10009263m.g Citrus clementina HOM05D002209 ORTHO05D007926 6.9e-94 347.8 249 69.5
Sc10g0009340 Simmondsia chinensis HOM05D002209 ORTHO05D007926 9.0e-94 347.4 245 69.4
Sabra15G0055300 Salix brachista HOM05D002209 ORTHO05D007926 1.0e-92 344.0 249 69.9
Gohir.D06G123100 Gossypium hirsutum HOM05D002209 ORTHO05D007926 1.3e-92 343.6 247 71.3
Hma1.2p1_1257F.1_g270850 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 2.2e-92 342.8 250 70.0
Gorai.010G143200 Gossypium raimondii HOM05D002209 ORTHO05D007926 2.9e-92 342.4 247 70.9
Rhsim12G0139900 Rhododendron simsii HOM05D002209 ORTHO05D007926 2.9e-92 342.4 245 70.6
Actinidia18911 Actinidia chinensis HOM05D002209 ORTHO05D007926 8.5e-92 340.9 245 70.2
Actinidia35109 Actinidia chinensis HOM05D002209 ORTHO05D007926 1.4e-91 340.1 245 70.2
PGR083G0394 Punica granatum HOM05D002209 ORTHO05D007926 1.9e-91 339.7 244 69.3
Nitab4.5_0000150g0080 Nicotiana tabacum HOM05D002209 ORTHO05D007926 2.5e-91 339.3 246 66.7
Sed0021446 Sechium edule HOM05D002209 ORTHO05D007926 2.5e-91 339.3 247 66.8
TAR622G1089 Trochodendron aralioides HOM05D002209 ORTHO05D007926 3.2e-91 339.0 249 69.9
Gohir.A06G114800 Gossypium hirsutum HOM05D002209 ORTHO05D007926 5.5e-91 338.2 247 70.9
TWI81G0293 Tripterygium wilfordii HOM05D002209 ORTHO05D007926 5.5e-91 338.2 247 68.4
ECA240G0871 Erigeron canadensis HOM05D002209 ORTHO05D007926 4.6e-90 335.1 245 68.6
Nitab4.5_0001158g0030 Nicotiana tabacum HOM05D002209 ORTHO05D007926 6.1e-90 334.7 229 72.1
MSTRG.22939 Avicennia marina HOM05D002209 ORTHO05D007926 1.3e-89 333.6 253 68.0
CANSAT80G1708 Cannabis sativa HOM05D002209 ORTHO05D007926 1.8e-89 333.2 248 68.5
CANSAT80G2078 Cannabis sativa HOM05D002209 ORTHO05D007926 1.8e-89 333.2 248 68.5
Prupe.5G229800 Prunus persica HOM05D002209 ORTHO05D007926 1.8e-89 333.2 254 66.1
Lsat_1_v5_gn_3_114081 Lactuca sativa HOM05D002209 ORTHO05D007926 3.9e-89 332.0 242 69.8
Migut.L01913 Erythranthe guttata HOM05D002209 ORTHO05D007926 1.1e-88 330.5 239 68.2
PSO017G1461 Papaver somniferum HOM05D002209 ORTHO05D007926 1.5e-88 330.1 240 68.8
PSO478G0876 Papaver somniferum HOM05D002209 ORTHO05D007926 1.5e-88 330.1 243 67.9
SalBow5G1692 Salvia bowleyana HOM05D002209 ORTHO05D007926 1.5e-88 330.1 237 68.8
Solyc03g119010.3 Solanum lycopersicum HOM05D002209 ORTHO05D007926 9.7e-88 327.4 228 70.6
Sabra15G0061600 Salix brachista HOM05D002209 ORTHO05D007926 1.6e-87 326.6 284 61.3
SGA_v2.0_scaffold21G09613 Striga asiatica HOM05D002209 ORTHO05D007926 1.6e-87 326.6 253 65.2
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 3.7e-87 325.5 244 70.9
THA.LOC104820370 Tarenaya hassleriana HOM05D002209 ORTHO05D007926 8.2e-87 324.3 243 66.7
CAN.G1129.32 Capsicum annuum HOM05D002209 ORTHO05D007926 1.8e-86 323.2 247 67.2
Eucgr.B00853 Eucalyptus grandis HOM05D002209 ORTHO05D007926 4.1e-86 322.0 244 66.0
MBI13_g00575_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D007926 4.1e-86 322.0 242 68.2
AT3G18165 Arabidopsis thaliana HOM05D002209 ORTHO05D007926 2.0e-85 319.7 243 64.6
Ah.11g045280 Amaranthus hybridus HOM05D002209 ORTHO05D007926 5.9e-85 318.2 246 64.2
Carub.0003s1789 Capsella rubella HOM05D002209 ORTHO05D007926 1.0e-84 317.4 243 64.6
BcaB04g20790 Brassica carinata HOM05D002209 ORTHO05D007926 1.3e-84 317.0 242 63.6
C05p47920 Brassica napus HOM05D002209 ORTHO05D007926 1.3e-84 317.0 243 63.8
MD00G1160500 Malus domestica HOM05D002209 ORTHO05D007926 2.9e-84 315.8 247 65.6
BcaC05g28661 Brassica carinata HOM05D002209 ORTHO05D007926 3.8e-84 315.5 243 63.4
BolC5t33504H Brassica oleracea HOM05D002209 ORTHO05D007926 3.8e-84 315.5 243 63.4
CARHR093490 Cardamine hirsuta HOM05D002209 ORTHO05D007926 5.0e-84 315.1 243 63.8
Aqoxy3G00431 Aquilegia oxysepala HOM05D002209 ORTHO05D007926 6.5e-84 314.7 256 64.5
EL10Ac5g11521 Beta vulgaris HOM05D002209 ORTHO05D007926 6.5e-84 314.7 250 63.2
A05p31590 Brassica napus HOM05D002209 ORTHO05D007926 6.5e-84 314.7 243 63.4
CDE08G0043 Ceratophyllum demersum HOM05D002209 ORTHO05D007926 6.5e-84 314.7 240 64.6
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 8.5e-84 314.3 245 62.4
BraA05t21994Z Brassica rapa HOM05D002209 ORTHO05D007926 8.5e-84 314.3 243 63.4
AL3G31340 Arabidopsis lyrata HOM05D002209 ORTHO05D007926 1.1e-83 313.9 243 63.4
BcaC09g48772 Brassica carinata HOM05D002209 ORTHO05D007926 1.1e-83 313.9 245 62.4
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 1.1e-83 313.9 245 62.4
Thhalv10021375m.g Eutrema salsugineum HOM05D002209 ORTHO05D007926 4.2e-83 312.0 245 62.0
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 7.2e-83 311.2 243 62.1
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 7.2e-83 311.2 243 62.1
Sp3g16280 Schrenkiella parvula HOM05D002209 ORTHO05D007926 1.2e-82 310.5 243 63.0
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 6.1e-82 308.1 232 65.9
HanXRQChr03g0090991 Helianthus annuus HOM05D002209 ORTHO05D007926 7.4e-80 301.2 228 67.5
HPP92_026682 Vanilla planifolia HOM05D002209 ORTHO05D007926 4.8e-79 298.5 235 63.8
GSVIVG01008385001 Vitis vinifera HOM05D002209 ORTHO05D007926 1.8e-78 296.6 196 74.0
AUR62033751 Chenopodium quinoa HOM05D002209 ORTHO05D007926 7.7e-77 291.2 270 58.1
Nn2g14536 Nelumbo nucifera HOM05D002209 ORTHO05D007926 2.9e-76 289.3 232 64.2
Zm00001eb128260 Zea mays HOM05D002209 ORTHO05D007926 2.9e-76 289.3 244 60.7
MD14G1233600 Malus domestica HOM05D002209 ORTHO05D007926 3.8e-76 288.9 229 64.6
vmacro16426 Vaccinium macrocarpon HOM05D002209 ORTHO05D007926 1.9e-75 286.6 321 52.6
Hund02335 Selenicereus undatus HOM05D002209 ORTHO05D007926 2.1e-74 283.1 246 59.8
unitig_27.g24963 Utricularia gibba HOM05D002209 ORTHO05D007926 2.1e-74 283.1 238 61.3
DCAR_011381 Daucus carota HOM05D002209 ORTHO05D007926 1.4e-73 280.4 240 61.7
RcHm_v2.0_Chr7g0178821 Rosa chinensis HOM05D002209 ORTHO05D007926 3.7e-71 272.3 251 61.0
ATR0068G069 Amborella trichopoda HOM05D002209 ORTHO05D007926 4.8e-71 271.9 236 57.6
FAN13G0553 Fragaria x ananassa HOM05D002209 ORTHO05D007926 1.2e-69 267.3 251 59.8
FAN08G0602 Fragaria x ananassa HOM05D002209 ORTHO05D007926 2.0e-69 266.5 253 58.9
FvH4_5g17030 Fragaria vesca HOM05D002209 ORTHO05D007926 4.5e-69 265.4 251 59.8
Cc04_g06640 Coffea canephora HOM05D002209 ORTHO05D007926 3.8e-68 262.3 196 66.3
Lj9A422G65 Lonicera japonica HOM05D002209 ORTHO05D007926 6.5e-68 261.5 208 67.3
COL.COLO4_07530 Corchorus olitorius HOM05D002209 ORTHO05D007926 4.2e-67 258.8 185 70.3
FAN18G2854 Fragaria x ananassa HOM05D002209 ORTHO05D007926 2.7e-66 256.1 251 58.2
Mapoly0110s0002 Marchantia polymorpha HOM05D002209 ORTHO05D007926 6.1e-66 255.0 234 53.4
Dinv13547 Davidia involucrata HOM05D002209 ORTHO05D007926 2.7e-61 239.6 254 52.4
AagrBONN_evm.TU.Sc2ySwM_344.2039 Anthoceros agrestis HOM05D002209 ORTHO05D007926 1.3e-60 237.3 234 50.9
Psat7g003920 Pisum sativum HOM05D002209 ORTHO05D007926 2.2e-60 236.5 139 83.5
Pp3c9_17380 Physcomitrium patens HOM05D002209 ORTHO05D007926 3.8e-60 235.7 237 51.1
Oeu014368.1 Olea europaea HOM05D002209 ORTHO05D007926 1.2e-56 224.2 163 68.1
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 4.4e-56 222.2 157 72.6
SMO339G0064 Selaginella moellendorffii HOM05D002209 ORTHO05D007926 1.7e-55 220.3 235 48.1
AUR62029954 Chenopodium quinoa HOM05D002209 ORTHO05D007926 2.0e-53 213.4 190 58.9
CBR_g46893 Chara braunii HOM05D006221 ORTHO05D007759 2.3e-49 199.9 230 47.4
HPP92_018005 Vanilla planifolia HOM05D002209 ORTHO05D007926 1.2e-48 197.6 182 54.4
Hma1.2p1_1257F.1_g270860 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 9.8e-48 194.5 137 70.8
SEGI_33728 Sequoiadendron giganteum HOM05D002209 ORTHO05D007926 2.2e-39 166.8 131 63.4
Ca_17308_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 9.8e-32 141.4 85 84.7
Psat7g003960 Pisum sativum HOM05D002209 ORTHO05D007926 1.9e-30 137.1 84 81.0
Cre17.g697350 Chlamydomonas reinhardtii HOM05D002209 ORTHO05D007926 1.6e-29 134.0 246 33.7
MCO11G869 Micromonas commoda HOM05D002209 ORTHO05D007926 3.9e-28 129.4 205 35.6
C05p44850 Brassica napus HOM05D002209 ORTHO05D007926 1.4e-22 110.9 79 65.8
BolC5t33212H Brassica oleracea HOM05D002209 ORTHO05D007926 1.4e-22 110.9 79 65.8
AUR62029953 Chenopodium quinoa HOM05D002209 ORTHO05D007926 1.6e-18 97.4 82 58.5
Ca_29797_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 3.6e-18 96.3 62 77.4
A10p11050 Brassica napus HOM05D002209 ORTHO05D033214 4.6e-13 79.3 61 60.7
BolC6t38528H Brassica oleracea HOM05D002209 ORTHO05D033214 1.3e-07 61.2 47 59.6
BraA10t43197Z Brassica rapa HOM05D002209 ORTHO05D033214 3.2e-06 56.6 46 56.5


User provided reference genes

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