Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G327000 Phaseolus vulgaris HOM05D006376 ORTHO05D008046 8.0e-146 520.4 261 100.0
VMungo0251G1463 Vigna mungo HOM05D006376 ORTHO05D008046 4.0e-137 491.5 261 92.7
Glyma.08G051100 Glycine max HOM05D006376 ORTHO05D008046 2.6e-120 435.6 263 84.0
Glyma.05G243300 Glycine max HOM05D006376 ORTHO05D008046 8.4e-119 430.6 265 81.9
arahy.Tifrunner.gnm1.ann1.5Y9SE5 Arachis hypogaea HOM05D006376 ORTHO05D008046 4.9e-103 378.3 263 73.8
TPR.G12760 Trifolium pratense HOM05D006376 ORTHO05D008046 1.1e-102 377.1 267 71.5
arahy.Tifrunner.gnm1.ann1.CZ5T9B Arachis hypogaea HOM05D006376 ORTHO05D008046 2.7e-101 372.5 263 71.5
Lalb_Chr09g0330601 Lupinus albus HOM05D006376 ORTHO05D008046 1.0e-100 370.5 256 72.3
Lj4g0006852 Lotus japonicus HOM05D006376 ORTHO05D008046 4.8e-98 361.7 242 75.2
Psat7g004120 Pisum sativum HOM05D006376 ORTHO05D008046 4.9e-95 351.7 255 69.4
CiPaw.15G138400 Carya illinoinensis HOM05D006376 ORTHO05D008046 1.3e-87 327.0 235 68.9
QL10p027316 Quercus lobata HOM05D006376 ORTHO05D008046 1.3e-87 327.0 276 64.1
CiPaw.15G139000 Carya illinoinensis HOM05D006376 ORTHO05D008046 1.7e-87 326.6 235 68.5
COL.COLO4_37647 Corchorus olitorius HOM05D006376 ORTHO05D008046 6.5e-87 324.7 246 66.3
Prupe.5G228200 Prunus persica HOM05D006376 ORTHO05D008046 1.9e-86 323.2 240 67.5
Medtr8g106690 Medicago truncatula HOM05D006376 ORTHO05D008046 5.5e-86 321.6 242 66.9
Thecc.03G047000 Theobroma cacao HOM05D006376 ORTHO05D008046 5.5e-86 321.6 245 66.5
Eucgr.B00851 Eucalyptus grandis HOM05D006376 ORTHO05D008046 2.7e-85 319.3 258 65.1
FvH4_5g16950 Fragaria vesca HOM05D006376 ORTHO05D008046 4.6e-85 318.5 239 67.4
FAN18G1549 Fragaria x ananassa HOM05D006376 ORTHO05D008046 4.6e-85 318.5 239 67.4
GSVIVG01008377001 Vitis vinifera HOM05D006376 ORTHO05D008046 6.1e-85 318.2 253 67.2
FAN08G1323 Fragaria x ananassa HOM05D006376 ORTHO05D008046 2.3e-84 316.2 238 66.8
Atru.chr9.942 Acer truncatum HOM05D006376 ORTHO05D008046 3.0e-84 315.8 251 63.3
Manes.14G168100 Manihot esculenta HOM05D006376 ORTHO05D008046 5.1e-84 315.1 261 64.0
Dinv13549 Davidia involucrata HOM05D006376 ORTHO05D008046 6.7e-84 314.7 256 65.2
RcHm_v2.0_Chr7g0179071 Rosa chinensis HOM05D006376 ORTHO05D008046 8.7e-84 314.3 232 65.9
Gohir.D12G268200 Gossypium hirsutum HOM05D006376 ORTHO05D008046 1.1e-83 313.9 243 64.6
Gorai.008G288200 Gossypium raimondii HOM05D006376 ORTHO05D008046 1.5e-83 313.5 243 64.6
FAN04G0856 Fragaria x ananassa HOM05D006376 ORTHO05D008046 1.9e-83 313.2 236 66.1
FAN13G1861 Fragaria x ananassa HOM05D006376 ORTHO05D008046 1.9e-83 313.2 236 66.1
Potri.012G052300 Populus trichocarpa HOM05D006376 ORTHO05D008046 2.5e-83 312.8 264 62.9
CANSAT21G0790 Cannabis sativa HOM05D006376 ORTHO05D008046 3.3e-83 312.4 214 71.0
Cpa.g.sc3.442 Carica papaya HOM05D006376 ORTHO05D008046 7.4e-83 311.2 217 69.6
Sabra12G0035600 Salix brachista HOM05D006376 ORTHO05D008046 9.7e-83 310.8 249 64.3
Hund02337 Selenicereus undatus HOM05D006376 ORTHO05D008046 1.6e-82 310.1 206 74.3
AUR62029950 Chenopodium quinoa HOM05D006376 ORTHO05D008046 4.8e-82 308.5 204 72.5
Haze_18787 Corylus avellana HOM05D006376 ORTHO05D008046 4.8e-82 308.5 174 82.8
TWI81G0521 Tripterygium wilfordii HOM05D006376 ORTHO05D008046 6.3e-82 308.1 246 64.2
Duzib205G0506 Durio zibethinus HOM05D006376 ORTHO05D008046 8.2e-82 307.8 242 66.5
Ciclev10009207m.g Citrus clementina HOM05D006376 ORTHO05D008046 1.4e-81 307.0 262 59.9
AUR62033755 Chenopodium quinoa HOM05D006376 ORTHO05D008046 2.4e-81 306.2 204 71.6
Cfa019704 Carpinus fangiana HOM05D006376 ORTHO05D008046 3.1e-81 305.8 173 82.7
TAR629G1456 Trochodendron aralioides HOM05D006376 ORTHO05D008046 4.1e-81 305.4 253 62.5
MELO3C017340.2 Cucumis melo HOM05D006376 ORTHO05D008046 5.3e-81 305.1 256 63.3
CsaV3_1G004140 Cucumis sativus L. HOM05D006376 ORTHO05D008046 6.9e-81 304.7 264 63.6
PGR083G0770 Punica granatum HOM05D006376 ORTHO05D008046 9.0e-81 304.3 250 62.0
Cc04_g06670 Coffea canephora HOM05D006376 ORTHO05D008046 1.5e-80 303.5 237 64.1
Oeu024338.1 Olea europaea HOM05D006376 ORTHO05D008046 1.5e-80 303.5 269 60.2
Lj9A422G67 Lonicera japonica HOM05D006376 ORTHO05D008046 4.5e-80 302.0 263 60.5
Sc04g0003270 Simmondsia chinensis HOM05D006376 ORTHO05D008046 1.7e-79 300.1 176 80.1
Actinidia02655 Actinidia chinensis HOM05D006376 ORTHO05D008046 8.5e-79 297.7 274 57.7
Rhsim07G0069700 Rhododendron simsii HOM05D006376 ORTHO05D008046 2.5e-78 296.2 265 59.6
SGA_v2.0_scaffold171G38935 Striga asiatica HOM05D006376 ORTHO05D008046 2.5e-78 296.2 253 61.7
EL10Ac5g11519 Beta vulgaris HOM05D006376 ORTHO05D008046 4.2e-78 295.4 200 69.0
Hma1.2p1_0660F.1_g197700 Hydrangea macrophylla HOM05D006376 ORTHO05D008046 4.2e-78 295.4 203 68.5
RhsimUnG0086600 Rhododendron simsii HOM05D006376 ORTHO05D008046 4.2e-78 295.4 267 59.2
Rhsim07G0070500 Rhododendron simsii HOM05D006376 ORTHO05D008046 9.4e-78 294.3 205 70.2
Carub.0001s1773 Capsella rubella HOM05D006376 ORTHO05D008046 1.2e-77 293.9 203 71.9
Ca_17222_v3 Cicer arietinum L. HOM05D006376 ORTHO05D008046 2.1e-77 293.1 163 81.0
DCAR_014774 Daucus carota HOM05D006376 ORTHO05D008046 2.1e-77 293.1 205 67.8
Lj3g0018404 Lotus japonicus HOM05D006376 ORTHO05D008046 4.6e-77 292.0 174 79.3
AL1G30420 Arabidopsis lyrata HOM05D006376 ORTHO05D008046 6.1e-77 291.6 185 74.6
Nn3g18015 Nelumbo nucifera HOM05D006376 ORTHO05D008046 1.4e-76 290.4 262 59.5
Thhalv10008687m.g Eutrema salsugineum HOM05D006376 ORTHO05D008046 2.3e-76 289.7 186 75.3
THA.LOC104813912 Tarenaya hassleriana HOM05D006376 ORTHO05D008046 2.3e-76 289.7 203 68.5
A08p30580 Brassica napus HOM05D006376 ORTHO05D008046 3.9e-76 288.9 185 73.5
ECA233G1742 Erigeron canadensis HOM05D006376 ORTHO05D008046 3.9e-76 288.9 177 75.7
vmacro17793 Vaccinium macrocarpon HOM05D006376 ORTHO05D008046 5.1e-76 288.5 262 58.0
C08p18330 Brassica napus HOM05D006376 ORTHO05D008046 8.8e-76 287.7 185 73.5
BolC8t49467H Brassica oleracea HOM05D006376 ORTHO05D008046 8.8e-76 287.7 185 73.5
AT1G18060 Arabidopsis thaliana HOM05D006376 ORTHO05D008046 1.1e-75 287.3 185 74.6
CARHR018640 Cardamine hirsuta HOM05D006376 ORTHO05D008046 1.5e-75 287.0 185 73.0
BraA08t34989Z Brassica rapa HOM05D000280 ORTHO05D004091 2.0e-75 286.6 175 76.6
MBI16_g21168_MAGBIO Magnolia biondii HOM05D006376 ORTHO05D008046 4.3e-75 285.4 222 63.5
Aqoxy3G03987 Aquilegia oxysepala HOM05D006376 ORTHO05D008046 7.4e-75 284.6 253 58.9
Lsat_1_v5_gn_8_3561 Lactuca sativa HOM05D006376 ORTHO05D008046 1.7e-74 283.5 252 60.3
Nitab4.5_0012340g0010 Nicotiana tabacum HOM05D006376 ORTHO05D008046 1.7e-74 283.5 207 67.1
MSTRG.4559 Avicennia marina HOM05D006376 ORTHO05D008046 2.2e-74 283.1 239 61.9
Nitab4.5_0001194g0140 Nicotiana tabacum HOM05D006376 ORTHO05D008046 3.7e-74 282.3 207 67.1
Solyc06g069030.3 Solanum lycopersicum HOM05D006376 ORTHO05D008046 6.3e-74 281.6 207 68.1
PGSC0003DMG400028793 Solanum tuberosum HOM05D006376 ORTHO05D008046 8.2e-74 281.2 207 67.6
HanXRQChr05g0144491 Helianthus annuus HOM05D006376 ORTHO05D008046 1.4e-73 280.4 227 62.6
CAN.G423.18 Capsicum annuum HOM05D006376 ORTHO05D008046 1.8e-73 280.0 207 65.2
Sopen06g026320 Solanum pennellii HOM05D006376 ORTHO05D008046 3.4e-72 275.8 203 66.5
Zm00001eb334810 Zea mays HOM05D006376 ORTHO05D008046 3.4e-72 275.8 243 59.3
Aa31LG6G2990 Aethionema arabicum HOM05D006376 ORTHO05D008046 5.9e-72 275.0 209 65.1
Peaxi162Scf00332g00023 Petunia axillaris HOM05D006376 ORTHO05D008046 5.9e-72 275.0 250 59.2
Os01g0120500 Oryza sativa ssp. japonica HOM05D006376 ORTHO05D008046 1.0e-71 274.2 262 57.3
ATR0691G291 Amborella trichopoda HOM05D006376 ORTHO05D008046 2.2e-71 273.1 204 66.2
CDE03G0312 Ceratophyllum demersum HOM05D006376 ORTHO05D008046 2.5e-70 269.6 196 64.8
PSO675G4918 Papaver somniferum HOM05D006376 ORTHO05D008046 4.2e-70 268.9 179 68.7
PSO717G0073 Papaver somniferum HOM05D006376 ORTHO05D008046 7.2e-70 268.1 194 64.9
BcaC07g38909 Brassica carinata HOM05D006376 ORTHO05D008046 1.2e-69 267.3 159 76.7
Duzib084G1315 Durio zibethinus HOM05D006376 ORTHO05D008046 2.1e-69 266.5 204 64.7
ClCG06G014480 Citrullus lanatus HOM05D006376 ORTHO05D008046 2.7e-69 266.2 255 60.0
Sp1g16080 Schrenkiella parvula HOM05D006376 ORTHO05D008046 2.2e-66 256.5 147 78.9
HPP92_000150 Vanilla planifolia HOM05D006376 ORTHO05D008046 7.0e-65 251.5 173 69.4
Gohir.A12G267700 Gossypium hirsutum HOM05D006376 ORTHO05D008046 4.2e-62 242.3 246 53.7
SEGI_27865 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 3.6e-61 239.2 194 60.8
Migut.D01443 Erythranthe guttata HOM05D006376 ORTHO05D008046 1.0e-60 237.7 177 63.8
Pp3c8_21790 Physcomitrium patens HOM05D006376 ORTHO05D008046 2.4e-57 226.5 218 54.6
unitig_21.g20431 Utricularia gibba HOM05D006376 ORTHO05D008046 4.5e-56 222.2 193 61.1
AagrBONN_evm.TU.Sc2ySwM_340.32 Anthoceros agrestis HOM05D006376 ORTHO05D008046 2.9e-55 219.5 210 52.4
MD06G1223100 Malus domestica HOM05D006376 ORTHO05D008046 1.6e-53 213.8 120 77.5
SMO116G0316 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 5.4e-49 198.7 184 52.2
Mapoly0001s0324 Marchantia polymorpha HOM05D006376 ORTHO05D008046 7.0e-49 198.4 225 46.2
SMO164G0083 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 6.5e-47 191.8 176 54.0
SEGI_30520 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 2.3e-36 156.8 95 74.7
MD14G1232300 Malus domestica HOM05D006376 ORTHO05D008046 1.7e-34 150.6 165 56.4
Thecc.03G047400 Theobroma cacao HOM05D006376 ORTHO05D008046 4.6e-32 142.5 148 57.4
arahy.Tifrunner.gnm1.ann1.VLX8JM Arachis hypogaea HOM05D006376 ORTHO05D008046 2.3e-28 130.2 119 64.7
arahy.Tifrunner.gnm1.ann1.8TB400 Arachis hypogaea HOM05D006376 ORTHO05D008046 3.1e-28 129.8 89 79.8
arahy.Tifrunner.gnm1.ann1.Y3IZ58 Arachis hypogaea HOM05D006376 ORTHO05D008046 3.1e-28 129.8 89 79.8
arahy.Tifrunner.gnm1.ann1.FQ3MGU Arachis hypogaea HOM05D006376 ORTHO05D008046 2.0e-27 127.1 89 79.8
arahy.Tifrunner.gnm1.ann1.W819WZ Arachis hypogaea HOM05D006376 ORTHO05D008046 4.4e-27 125.9 89 77.5
Rhsim07G0070600 Rhododendron simsii HOM05D006376 ORTHO05D008046 2.0e-24 117.1 127 53.5
Cre09.g401350 Chlamydomonas reinhardtii HOM05D006376 ORTHO05D008046 1.1e-22 111.3 174 39.1
PRCOL_00002665 Prasinoderma coloniale HOM05D006376 ORTHO05D008046 7.3e-22 108.6 171 36.8
Hma1.2p1_0660F.1_g197690 Hydrangea macrophylla HOM05D006376 ORTHO05D008046 1.8e-20 104.0 90 58.9
arahy.Tifrunner.gnm1.ann1.XS5A0Y Arachis hypogaea HOM05D006376 ORTHO05D008046 1.9e-17 94.0 72 76.4
arahy.Tifrunner.gnm1.ann1.QNQ2AZ Arachis hypogaea HOM05D006376 ORTHO05D008046 9.2e-17 91.7 75 72.0
SEGI_17791 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 2.7e-16 90.1 62 64.5
arahy.Tifrunner.gnm1.ann1.PN4BM4 Arachis hypogaea HOM05D001163 ORTHO05D001769 7.8e-16 88.6 75 68.0
Dinv17636 Davidia involucrata HOM05D012663 ORTHO05D004533 6.4e-10 68.9 47 72.3
SMO170G0025 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 9.2e-09 65.1 67 52.2
SMO137G0132 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 3.5e-08 63.2 64 53.1
VMungo0647G1967 Vigna mungo HOM05D006376 ORTHO05D008046 7.8e-08 62.0 39 89.7


User provided reference genes

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