Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G320600 Phaseolus vulgaris HOM05D007313 ORTHO05D005299 1.3e-35 152.5 79 100.0
VMungo0540G1213 Vigna mungo HOM05D007313 ORTHO05D005299 4.4e-23 110.9 72 83.3
Glyma.05G238200 Glycine max HOM05D007313 ORTHO05D005299 2.1e-17 92.0 62 80.6
Glyma.08G045300 Glycine max HOM05D007313 ORTHO05D005299 1.1e-16 89.7 59 83.1
Lj4g0008951 Lotus japonicus HOM05D007313 ORTHO05D005299 3.1e-16 88.2 77 64.9
Psat7g008240 Pisum sativum HOM05D007313 ORTHO05D005299 1.6e-12 75.9 58 67.2
COL.COLO4_16580 Corchorus olitorius HOM05D007313 ORTHO05D005299 7.9e-12 73.6 57 63.2
Ca_17263_v3 Cicer arietinum L. HOM05D007313 ORTHO05D005299 1.8e-11 72.4 58 63.8
Ca_17284_v3 Cicer arietinum L. HOM05D007313 ORTHO05D005299 1.8e-11 72.4 58 63.8
Prupe.1G332700 Prunus persica HOM05D007313 ORTHO05D005299 3.9e-11 71.2 76 56.6
Gohir.A03G114900 Gossypium hirsutum HOM05D007313 ORTHO05D005299 5.1e-11 70.9 75 53.3
Medtr8g105190 Medicago truncatula HOM05D007313 ORTHO05D005299 6.7e-11 70.5 58 63.8
Gohir.A01G147300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 8.7e-11 70.1 57 61.4
Gohir.D01G140300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 8.7e-11 70.1 57 61.4
Gorai.002G172500 Gossypium raimondii HOM05D007313 ORTHO05D005299 8.7e-11 70.1 57 61.4
Duzib248G0390 Durio zibethinus HOM05D007313 ORTHO05D005299 1.1e-10 69.7 57 63.2
Duzib268G0019 Durio zibethinus HOM05D007313 ORTHO05D005299 1.1e-10 69.7 57 59.6
Thecc.02G291900 Theobroma cacao HOM05D007313 ORTHO05D005299 1.9e-10 68.9 57 61.4
TPR.G27729 Trifolium pratense HOM05D007313 ORTHO05D005299 1.9e-10 68.9 52 67.3
Gohir.D02G140300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 2.5e-10 68.6 57 61.4
Gorai.005G156500 Gossypium raimondii HOM05D007313 ORTHO05D005299 2.5e-10 68.6 57 61.4
Lalb_Chr09g0330931 Lupinus albus HOM05D007313 ORTHO05D005299 2.5e-10 68.6 50 70.0
Potri.008G134100 Populus trichocarpa HOM05D007313 ORTHO05D005299 1.3e-09 66.2 55 63.6
Cfa015015 Carpinus fangiana HOM05D007313 ORTHO05D005299 1.6e-09 65.9 56 66.1
Dinv10480 Davidia involucrata HOM05D007313 ORTHO05D005299 6.2e-09 63.9 59 61.0
MD16G1019400 Malus domestica HOM05D007313 ORTHO05D005299 6.2e-09 63.9 81 48.1
RcHm_v2.0_Chr4g0443131 Rosa chinensis HOM05D007313 ORTHO05D005299 8.1e-09 63.5 58 60.3
Cpa.g.sc2.206 Carica papaya HOM05D007313 ORTHO05D005299 1.8e-08 62.4 52 65.4
Haze_10890 Corylus avellana HOM05D007313 ORTHO05D005299 1.8e-08 62.4 56 62.5
FvH4_4g33670 Fragaria vesca HOM05D007313 ORTHO05D005299 1.8e-08 62.4 59 62.7
FAN12G3843 Fragaria x ananassa HOM05D007313 ORTHO05D005299 1.8e-08 62.4 59 62.7
FAN22G0875 Fragaria x ananassa HOM05D007313 ORTHO05D005299 2.4e-08 62.0 59 62.7
CSS0045507 Camellia sinensis var. sinensis HOM05D007313 ORTHO05D005299 3.1e-08 61.6 73 49.3
CSS0007506 Camellia sinensis var. sinensis HOM05D007313 ORTHO05D005299 4.0e-08 61.2 73 50.7
FAN07G0870 Fragaria x ananassa HOM05D007313 ORTHO05D005299 9.0e-08 60.1 59 61.0
Sabra08G0102600 Salix brachista HOM05D007313 ORTHO05D005299 1.2e-07 59.7 55 58.2
QL03p035637 Quercus lobata HOM05D007313 ORTHO05D005299 1.5e-07 59.3 59 62.7
Atru.chr11.945 Acer truncatum HOM05D007313 ORTHO05D005299 2.6e-07 58.5 60 55.0
DCAR_026801 Daucus carota HOM05D007313 ORTHO05D005299 3.4e-07 58.2 60 56.7
Rhsim09G0090300 Rhododendron simsii HOM05D007313 ORTHO05D005299 4.5e-07 57.8 64 53.1
Migut.E00472 Erythranthe guttata HOM05D007313 ORTHO05D005299 7.6e-07 57.0 63 52.4
Sabra10G0078300 Salix brachista HOM05D007313 ORTHO05D005299 9.9e-07 56.6 52 59.6
Manes.15G133700 Manihot esculenta HOM05D007313 ORTHO05D005299 1.7e-06 55.8 60 53.3
Potri.010G107200 Populus trichocarpa HOM05D007313 ORTHO05D005299 1.7e-06 55.8 55 60.0
Ciclev10017248m.g Citrus clementina HOM05D007313 ORTHO05D005299 4.9e-06 54.3 59 52.5
Manes.17G083600 Manihot esculenta HOM05D007313 ORTHO05D005299 4.9e-06 54.3 48 58.3


User provided reference genes

Program Settings