Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G317100 Phaseolus vulgaris HOM05D006927 ORTHO05D009065 3.9e-173 611.3 297 100.0
VMungo0251G3349 Vigna mungo HOM05D006927 ORTHO05D009065 1.3e-139 500.0 304 82.6
Glyma.06G001500 Glycine max HOM05D006927 ORTHO05D009065 3.3e-127 458.8 311 75.6
Lj1g0006598 Lotus japonicus HOM05D006927 ORTHO05D009065 4.3e-127 458.4 299 75.3
Medtr3g118320 Medicago truncatula HOM05D006927 ORTHO05D009065 1.6e-121 439.9 300 71.7
TPR.G38566 Trifolium pratense HOM05D006927 ORTHO05D009065 3.5e-121 438.7 306 71.2
Dinv43961 Davidia involucrata HOM05D006927 ORTHO05D009065 1.6e-118 429.9 302 69.9
GSVIVG01019324001 Vitis vinifera HOM05D006927 ORTHO05D009065 5.2e-117 424.9 292 71.2
QL04p053394 Quercus lobata HOM05D006927 ORTHO05D009065 8.9e-117 424.1 301 68.1
Manes.09G133500 Manihot esculenta HOM05D006927 ORTHO05D009065 3.4e-116 422.2 303 69.6
Prupe.2G106800 Prunus persica HOM05D006927 ORTHO05D009065 3.4e-116 422.2 306 67.6
TWI34G1327 Tripterygium wilfordii HOM05D006927 ORTHO05D009065 3.4e-116 422.2 293 70.3
Gohir.A11G224222 Gossypium hirsutum HOM05D006927 ORTHO05D009065 7.5e-116 421.0 291 69.1
Lsat_1_v5_gn_1_89341 Lactuca sativa HOM05D006927 ORTHO05D009065 9.9e-116 420.6 300 69.0
Gorai.007G250200 Gossypium raimondii HOM05D006927 ORTHO05D009065 2.2e-115 419.5 290 69.0
Potri.013G070700 Populus trichocarpa HOM05D006927 ORTHO05D009065 3.7e-115 418.7 300 68.3
FAN03G0521 Fragaria x ananassa HOM05D006927 ORTHO05D009065 6.4e-115 417.9 306 67.0
Sed0018978 Sechium edule HOM05D006927 ORTHO05D009065 1.4e-114 416.8 283 70.0
HanXRQChr01g0018481 Helianthus annuus HOM05D006927 ORTHO05D009065 2.4e-114 416.0 297 69.4
RcHm_v2.0_Chr1g0340711 Rosa chinensis HOM05D006927 ORTHO05D009065 2.4e-114 416.0 294 68.0
MD07G1081500 Malus domestica HOM05D006927 ORTHO05D009065 3.2e-114 415.6 280 71.8
CSS0044270 Camellia sinensis var. sinensis HOM05D006927 ORTHO05D009065 5.4e-114 414.8 284 69.4
SalBow5G1207 Salvia bowleyana HOM05D006927 ORTHO05D009065 9.2e-114 414.1 297 68.7
FvH4_7g08340 Fragaria vesca HOM05D006927 ORTHO05D009065 1.2e-113 413.7 306 66.0
ECA248G1152 Erigeron canadensis HOM05D006927 ORTHO05D009065 1.6e-113 413.3 295 69.8
CSS0031880 Camellia sinensis var. sinensis HOM05D006927 ORTHO05D009065 2.1e-113 412.9 284 69.0
Nitab4.5_0000792g0130 Nicotiana tabacum HOM05D006927 ORTHO05D009065 2.7e-113 412.5 294 68.0
arahy.Tifrunner.gnm1.ann1.DTN3WJ Arachis hypogaea HOM05D006927 ORTHO05D009065 3.5e-113 412.1 286 68.5
Thecc.05G234500 Theobroma cacao HOM05D006927 ORTHO05D009065 4.6e-113 411.8 284 69.7
Duzib177G0162 Durio zibethinus HOM05D006927 ORTHO05D009065 6.0e-113 411.4 292 68.2
CsaV3_6G006390 Cucumis sativus L. HOM05D006927 ORTHO05D009065 7.8e-113 411.0 312 65.4
Migut.B01420 Erythranthe guttata HOM05D006927 ORTHO05D009065 7.8e-113 411.0 297 67.3
arahy.Tifrunner.gnm1.ann1.A7PVHI Arachis hypogaea HOM05D006927 ORTHO05D009065 1.0e-112 410.6 288 68.8
MELO3C022480.2 Cucumis melo HOM05D006927 ORTHO05D009065 1.3e-112 410.2 285 69.1
Cpa.g.sc73.27 Carica papaya HOM05D006927 ORTHO05D009065 1.7e-112 409.8 301 67.4
FAN10G1940 Fragaria x ananassa HOM05D006927 ORTHO05D009065 1.7e-112 409.8 314 65.0
Cc02_g26470 Coffea canephora HOM05D006927 ORTHO05D009065 3.0e-112 409.1 286 68.9
Rhsim07G0047700 Rhododendron simsii HOM05D006927 ORTHO05D009065 3.0e-112 409.1 326 64.1
Nitab4.5_0006785g0060 Nicotiana tabacum HOM05D006927 ORTHO05D009065 1.1e-111 407.1 301 66.1
Eucgr.D01080 Eucalyptus grandis HOM05D006927 ORTHO05D009065 3.3e-111 405.6 286 68.2
Aqoxy1G00986 Aquilegia oxysepala HOM05D006927 ORTHO05D009065 4.3e-111 405.2 300 66.7
Sopen01g033040 Solanum pennellii HOM05D006927 ORTHO05D009065 4.3e-111 405.2 281 68.0
Peaxi162Scf00907g00025 Petunia axillaris HOM05D006927 ORTHO05D009065 7.3e-111 404.4 288 68.4
DCAR_001906 Daucus carota HOM05D006927 ORTHO05D009065 1.2e-110 403.7 293 65.9
PGR083G0610 Punica granatum HOM05D006927 ORTHO05D009065 1.6e-110 403.3 289 67.8
Solyc01g081480.3 Solanum lycopersicum HOM05D006927 ORTHO05D009065 2.1e-110 402.9 281 67.6
Ciclev10032190m.g Citrus clementina HOM05D006927 ORTHO05D009065 2.8e-110 402.5 299 66.6
FAN06G3009 Fragaria x ananassa HOM05D006927 ORTHO05D009065 3.6e-110 402.1 324 62.3
PGSC0003DMG400031110 Solanum tuberosum HOM05D006927 ORTHO05D009065 6.2e-110 401.4 301 64.5
ClCG06G000620 Citrullus lanatus HOM05D006927 ORTHO05D009065 3.1e-109 399.1 338 61.2
Atru.chr2.1634 Acer truncatum HOM05D006927 ORTHO05D009065 4.0e-109 398.7 336 62.2
THA.LOC104820815 Tarenaya hassleriana HOM05D006927 ORTHO05D009065 8.9e-109 397.5 307 62.9
AT5G17670 Arabidopsis thaliana HOM05D006927 ORTHO05D009065 1.2e-108 397.1 298 64.8
ATR0568G108 Amborella trichopoda HOM05D006927 ORTHO05D009065 2.0e-108 396.4 280 68.6
AL6G28760 Arabidopsis lyrata HOM05D006927 ORTHO05D009065 2.0e-108 396.4 301 65.1
Sc11g0005590 Simmondsia chinensis HOM05D006927 ORTHO05D009065 2.0e-108 396.4 301 63.8
CANSAT25G2771 Cannabis sativa HOM05D006927 ORTHO05D009065 2.6e-108 396.0 279 67.4
CAN.G992.25 Capsicum annuum HOM05D006927 ORTHO05D009065 2.6e-108 396.0 291 64.9
Haze_15787 Corylus avellana HOM05D006927 ORTHO05D009065 4.4e-108 395.2 301 67.8
Ah.16g104050 Amaranthus hybridus HOM05D006927 ORTHO05D009065 5.8e-108 394.8 276 71.0
Ca_15418_v3 Cicer arietinum L. HOM05D006927 ORTHO05D009065 1.3e-107 393.7 289 67.5
PSO675G5316 Papaver somniferum HOM05D006927 ORTHO05D009065 1.3e-107 393.7 316 61.4
TAR629G3441 Trochodendron aralioides HOM05D006927 ORTHO05D009065 2.9e-107 392.5 279 67.4
Sp6g26550 Schrenkiella parvula HOM05D006927 ORTHO05D009065 6.4e-107 391.3 306 64.4
Thhalv10014137m.g Eutrema salsugineum HOM05D006927 ORTHO05D009065 1.1e-106 390.6 305 64.3
MBI04_g06278_MAGBIO Magnolia biondii HOM05D006927 ORTHO05D009065 4.2e-106 388.7 279 67.4
BcaC03g13532 Brassica carinata HOM05D006927 ORTHO05D009065 5.4e-106 388.3 302 64.6
Os02g0129900 Oryza sativa ssp. japonica HOM05D006927 ORTHO05D009065 5.4e-106 388.3 301 65.1
Carub.0006s1591 Capsella rubella HOM05D006927 ORTHO05D009065 9.2e-106 387.5 304 62.8
Lalb_Chr08g0246751 Lupinus albus HOM05D006927 ORTHO05D009065 1.2e-105 387.1 298 64.4
Zm00001eb208940 Zea mays HOM05D006927 ORTHO05D009065 4.6e-105 385.2 286 64.0
Lj9A617T58 Lonicera japonica HOM05D006927 ORTHO05D009065 6.0e-105 384.8 276 67.0
A02p04400 Brassica napus HOM05D006927 ORTHO05D009065 1.5e-103 380.2 307 62.2
C02p09230 Brassica napus HOM05D006927 ORTHO05D009065 1.5e-103 380.2 308 63.0
COL.COLO4_21417 Corchorus olitorius HOM05D006927 ORTHO05D009065 6.2e-102 374.8 271 66.4
vmacro13598 Vaccinium macrocarpon HOM05D006927 ORTHO05D009065 4.0e-101 372.1 407 50.4
Aa31LG11G11960 Aethionema arabicum HOM05D006927 ORTHO05D009065 1.4e-98 363.6 336 57.4
SGA_v2.0_scaffold98G29375 Striga asiatica HOM05D006927 ORTHO05D009065 1.7e-96 356.7 290 62.1
AagrBONN_evm.TU.Sc2ySwM_228.4179 Anthoceros agrestis HOM05D006927 ORTHO05D009065 9.6e-95 350.9 299 57.9
Mapoly0110s0034 Marchantia polymorpha HOM05D006927 ORTHO05D009065 5.3e-93 345.1 288 59.4
Pp3c20_10810 Physcomitrium patens HOM05D006927 ORTHO05D009065 7.6e-92 341.3 299 54.8
FAN01G0804 Fragaria x ananassa HOM05D006927 ORTHO05D009065 6.4e-91 338.2 300 60.0
Psat5g000960 Pisum sativum HOM05D006927 ORTHO05D009065 1.8e-88 330.1 235 70.2
CDE02G0279 Ceratophyllum demersum HOM05D006927 ORTHO05D009065 6.7e-88 328.2 290 55.9
MD02G1231900 Malus domestica HOM05D006927 ORTHO05D009065 2.5e-87 326.2 250 63.6
SMO141G0137 Selaginella moellendorffii HOM05D006927 ORTHO05D009065 2.2e-83 313.2 303 54.8
Sabra13G0061600 Salix brachista HOM05D006927 ORTHO05D009065 1.8e-80 303.5 332 50.9
Dinv43521 Davidia involucrata HOM05D006927 ORTHO05D009065 1.1e-71 274.2 186 72.6
Nn1g09344 Nelumbo nucifera HOM05D006927 ORTHO05D009065 1.1e-71 274.2 166 77.7
Oeu034881.1 Olea europaea HOM05D006927 ORTHO05D009065 4.3e-71 272.3 182 73.1
Actinidia31733 Actinidia chinensis HOM05D006927 ORTHO05D009065 9.0e-69 264.6 178 70.8
CiPaw.02G047300 Carya illinoinensis HOM05D006927 ORTHO05D009065 1.2e-68 264.2 164 77.4
BolC2t06832H Brassica oleracea HOM05D006927 ORTHO05D009065 2.2e-67 260.0 183 71.6
MCO09G674 Micromonas commoda HOM05D006927 ORTHO05D009065 1.1e-66 257.7 273 47.6
BraA02t05404Z Brassica rapa HOM05D006927 ORTHO05D009065 1.4e-66 257.3 182 70.9
PRCOL_00002784 Prasinoderma coloniale HOM05D006927 ORTHO05D009065 1.8e-61 240.4 282 45.7
Cre07.g313550 Chlamydomonas reinhardtii HOM05D006927 ORTHO05D009065 2.4e-61 240.0 280 43.9
HPP92_025548 Vanilla planifolia HOM05D006927 ORTHO05D009065 4.1e-61 239.2 175 65.1
Aqoxy116s007 Aquilegia oxysepala HOM05D006927 ORTHO05D009065 8.5e-59 231.5 247 55.5
CARHR195510 Cardamine hirsuta HOM05D006927 ORTHO05D009065 5.5e-50 202.2 161 58.4
Gohir.D11G237100 Gossypium hirsutum HOM05D006927 ORTHO05D009065 3.3e-47 193.0 126 74.6
unitig_26.g8847 Utricularia gibba HOM05D006927 ORTHO05D009065 2.4e-45 186.8 130 71.5
MCO02G275 Micromonas commoda HOM05D006927 ORTHO05D044296 3.0e-32 143.3 318 33.3
unitig_26.g8846 Utricularia gibba HOM05D006927 ORTHO05D009065 1.2e-31 141.4 95 68.4
Cre01.g025150 Chlamydomonas reinhardtii HOM05D006927 ORTHO05D044296 2.8e-30 136.7 326 30.1
PRCOL_00000683 Prasinoderma coloniale HOM05D006927 ORTHO05D009065 4.8e-30 136.0 280 36.4
Thecc.05G234900 Theobroma cacao HOM05D006927 ORTHO05D009065 6.1e-25 119.0 60 83.3
SEGI_38351 Sequoiadendron giganteum HOM05D006927 ORTHO05D009065 1.0e-24 118.2 66 78.8
Actinidia34774 Actinidia chinensis HOM05D006927 ORTHO05D009065 8.9e-24 115.2 76 69.7
BcaB08g36753 Brassica carinata HOM05D006927 ORTHO05D009065 1.6e-17 94.4 139 39.6
HPP92_025520 Vanilla planifolia HOM05D006927 ORTHO05D009065 8.0e-17 92.0 151 43.7
AagrBONN_evm.TU.Sc2ySwM_368.1936 Anthoceros agrestis HOM05D006927 ORTHO05D071668 1.5e-15 87.8 254 26.4
PRCOL_00002844 Prasinoderma coloniale HOM05D006927 ORTHO05D049054 5.4e-13 79.3 131 35.9
CBR_g4745 Chara braunii HOM05D000019 ORTHO05D000002 6.0e-12 75.9 68 50.0
MCO12G090 Micromonas commoda HOM05D006927 ORTHO05D049054 1.3e-06 58.2 375 23.5


User provided reference genes

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