Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G312200 Phaseolus vulgaris HOM05D007491 ORTHO05D009489 1.1e-41 172.9 92 100.0
VMungo0251G1641 Vigna mungo HOM05D007491 ORTHO05D009489 5.5e-33 144.1 85 87.1
Glyma.08G037500 Glycine max HOM05D007491 ORTHO05D009489 2.7e-27 125.2 95 74.7
Glyma.05G230000 Glycine max HOM05D007491 ORTHO05D009489 4.2e-25 117.9 92 72.8
Lalb_Chr05g0222981 Lupinus albus HOM05D007491 ORTHO05D009489 9.4e-25 116.7 91 72.5
Lalb_Chr16g0388121 Lupinus albus HOM05D007491 ORTHO05D009489 1.8e-23 112.5 93 69.9
TPR.G23496 Trifolium pratense HOM05D007491 ORTHO05D009489 1.1e-20 103.2 96 62.5
Medtr8g103300 Medicago truncatula HOM05D007491 ORTHO05D009489 2.4e-20 102.1 92 64.1
CiPaw.03G229400 Carya illinoinensis HOM05D007491 ORTHO05D009489 2.7e-19 98.6 100 61.0
Ca_17329_v3 Cicer arietinum L. HOM05D007491 ORTHO05D009489 4.5e-19 97.8 96 65.6
Psat7g015280 Pisum sativum HOM05D007491 ORTHO05D009489 3.8e-18 94.7 94 62.8
Prupe.7G233600 Prunus persica HOM05D007491 ORTHO05D009489 5.0e-18 94.4 100 59.0
Carub.0001s4372 Capsella rubella HOM05D007491 ORTHO05D009489 3.2e-17 91.7 99 54.5
CARHR044840 Cardamine hirsuta HOM05D007491 ORTHO05D009489 3.2e-17 91.7 94 60.6
Sp1g40890 Schrenkiella parvula HOM05D007491 ORTHO05D009489 4.2e-17 91.3 98 57.1
CsaV3_2G002190 Cucumis sativus L. HOM05D007491 ORTHO05D009489 5.5e-17 90.9 101 56.4
PGR102G1855 Punica granatum HOM05D007491 ORTHO05D009489 9.5e-17 90.1 96 62.5
CSS0038485 Camellia sinensis var. sinensis HOM05D007491 ORTHO05D009489 1.2e-16 89.7 102 54.9
Lj4g0004733 Lotus japonicus HOM05D007491 ORTHO05D009489 1.2e-16 89.7 70 70.0
MD15G1182000 Malus domestica HOM05D007491 ORTHO05D009489 1.2e-16 89.7 99 58.6
AL1G63250 Arabidopsis lyrata HOM05D007491 ORTHO05D009489 2.1e-16 89.0 98 54.1
Lj2g0023927 Lotus japonicus HOM05D007491 ORTHO05D009489 2.1e-16 89.0 94 61.7
FvH4_1g04361 Fragaria vesca HOM05D007491 ORTHO05D009489 2.8e-16 88.6 96 56.2
THA.LOC104822629 Tarenaya hassleriana HOM05D007491 ORTHO05D009489 2.8e-16 88.6 99 54.5
AT1G55205 Arabidopsis thaliana HOM05D007491 ORTHO05D009489 3.6e-16 88.2 98 54.1
AT3G13674 Arabidopsis thaliana HOM05D007491 ORTHO05D009489 4.7e-16 87.8 99 57.6
GSVIVG01035656001 Vitis vinifera HOM05D007491 ORTHO05D009489 4.7e-16 87.8 99 55.6
FAN19G0791 Fragaria x ananassa HOM05D007491 ORTHO05D009489 8.0e-16 87.0 96 55.2
MD02G1043400 Malus domestica HOM05D007491 ORTHO05D009489 1.0e-15 86.7 99 58.6
Potri.018G082800 Populus trichocarpa HOM05D007491 ORTHO05D009489 1.0e-15 86.7 103 52.4
CANSAT78G0421 Cannabis sativa HOM05D007491 ORTHO05D009489 1.8e-15 85.9 92 58.7
Eucgr.C03814 Eucalyptus grandis HOM05D007491 ORTHO05D009489 3.0e-15 85.1 98 57.1
Dinv41621 Davidia involucrata HOM05D007491 ORTHO05D009489 6.8e-15 84.0 94 55.3
Thhalv10011893m.g Eutrema salsugineum HOM05D007491 ORTHO05D009489 6.8e-15 84.0 97 51.5
RcHm_v2.0_Chr2g0090011 Rosa chinensis HOM05D007491 ORTHO05D009489 6.8e-15 84.0 99 54.5
Sed0000101 Sechium edule HOM05D007491 ORTHO05D009489 6.8e-15 84.0 100 53.0
Thhalv10021835m.g Eutrema salsugineum HOM05D007491 ORTHO05D009489 8.8e-15 83.6 99 56.6
Thecc.09G107500 Theobroma cacao HOM05D007491 ORTHO05D009489 8.8e-15 83.6 95 61.1
Nn2g11682 Nelumbo nucifera HOM05D007491 ORTHO05D009489 1.2e-14 83.2 99 51.5
Carub.0003s1318 Capsella rubella HOM05D007491 ORTHO05D009489 2.0e-14 82.4 98 57.1
A06p00340 Brassica napus HOM05D007491 ORTHO05D009489 2.6e-14 82.0 95 53.7
BraA06t23249Z Brassica rapa HOM05D007491 ORTHO05D009489 2.6e-14 82.0 95 53.7
CARHR088390 Cardamine hirsuta HOM05D007491 ORTHO05D009489 2.6e-14 82.0 99 56.6
arahy.Tifrunner.gnm1.ann1.KI7M62 Arachis hypogaea HOM05D007491 ORTHO05D009489 4.4e-14 81.3 84 57.1
FAN23G1386 Fragaria x ananassa HOM05D007491 ORTHO05D009489 4.4e-14 81.3 95 52.6
Gohir.D07G006700 Gossypium hirsutum HOM05D007491 ORTHO05D009489 5.7e-14 80.9 93 51.6
Haze_25768 Corylus avellana HOM05D007491 ORTHO05D009489 9.8e-14 80.1 96 52.1
Rhsim01G0100500 Rhododendron simsii HOM05D007491 ORTHO05D009489 9.8e-14 80.1 94 52.1
Sed0025893 Sechium edule HOM05D007491 ORTHO05D009489 9.8e-14 80.1 103 50.5
Cfa003238 Carpinus fangiana HOM05D007491 ORTHO05D009489 1.7e-13 79.3 98 52.0
Gohir.A07G005300 Gossypium hirsutum HOM05D007491 ORTHO05D009489 1.7e-13 79.3 93 50.5
HanXRQChr10g0318621 Helianthus annuus HOM05D007491 ORTHO05D009489 2.8e-13 78.6 92 56.5
HanXRQChr12g0355021 Helianthus annuus HOM05D007491 ORTHO05D009489 2.8e-13 78.6 95 52.6
C06p10160 Brassica napus HOM05D007491 ORTHO05D009489 4.9e-13 77.8 94 53.2
Cc06_g09900 Coffea canephora HOM05D007491 ORTHO05D009489 4.9e-13 77.8 96 49.0
MELO3C004564.2 Cucumis melo HOM05D007491 ORTHO05D009489 4.9e-13 77.8 94 52.1
TWI63G0394 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 6.3e-13 77.4 102 51.0
ClCG11G002390 Citrullus lanatus HOM05D007491 ORTHO05D009489 8.3e-13 77.0 95 51.6
Duzib187G0523 Durio zibethinus HOM05D007491 ORTHO05D009489 8.3e-13 77.0 101 52.5
TAR383G0584 Trochodendron aralioides HOM05D007491 ORTHO05D009489 1.1e-12 76.6 94 53.2
TWI34G1809 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 1.4e-12 76.3 102 49.0
COL.COLO4_18682 Corchorus olitorius HOM05D007491 ORTHO05D009489 1.8e-12 75.9 102 49.0
PSO566G0269 Papaver somniferum HOM05D007491 ORTHO05D009489 1.8e-12 75.9 103 52.4
arahy.Tifrunner.gnm1.ann1.RT52KZ Arachis hypogaea HOM05D007491 ORTHO05D009489 3.1e-12 75.1 79 57.0
Dinv36653 Davidia involucrata HOM05D007491 ORTHO05D009489 3.1e-12 75.1 89 52.8
Duzib150G1582 Durio zibethinus HOM05D007491 ORTHO05D009489 3.1e-12 75.1 101 51.5
PSO782G0237 Papaver somniferum HOM05D007491 ORTHO05D009489 4.1e-12 74.7 105 53.3
BcaB04g16984 Brassica carinata HOM05D007491 ORTHO05D009489 5.4e-12 74.3 92 52.2
BcaC01g01475 Brassica carinata HOM05D007491 ORTHO05D009489 5.4e-12 74.3 96 50.0
A08p00850 Brassica napus HOM05D007491 ORTHO05D009489 5.4e-12 74.3 96 51.0
C03p92400 Brassica napus HOM05D007491 ORTHO05D009489 5.4e-12 74.3 96 50.0
BraA08t32143Z Brassica rapa HOM05D007491 ORTHO05D009489 5.4e-12 74.3 96 51.0
TWI32G0642 Tripterygium wilfordii HOM05D007491 ORTHO05D009489 7.0e-12 73.9 102 48.0
Oeu013426.2 Olea europaea HOM05D007491 ORTHO05D009489 9.2e-12 73.6 91 50.5
Sabra18G0070600 Salix brachista HOM05D007491 ORTHO05D009489 9.2e-12 73.6 96 49.0
ECA234G1405 Erigeron canadensis HOM05D007491 ORTHO05D009489 1.2e-11 73.2 98 50.0
Thecc.09G041400 Theobroma cacao HOM05D007491 ORTHO05D009489 1.2e-11 73.2 101 51.5
BolC3t21548H Brassica oleracea HOM05D007491 ORTHO05D009489 2.0e-11 72.4 96 51.0
Gohir.D06G094200 Gossypium hirsutum HOM05D007491 ORTHO05D009489 2.0e-11 72.4 106 48.1
Gorai.010G108700 Gossypium raimondii HOM05D007491 ORTHO05D009489 2.0e-11 72.4 106 48.1
Peaxi162Scf00231g00326 Petunia axillaris HOM05D007491 ORTHO05D009489 2.0e-11 72.4 94 50.0
Ciclev10010011m.g Citrus clementina HOM05D007491 ORTHO05D009489 3.5e-11 71.6 101 53.5
Hma1.2p1_1463F.1_g285180 Hydrangea macrophylla HOM05D007491 ORTHO05D009489 3.5e-11 71.6 88 48.9
Lsat_1_v5_gn_5_103040 Lactuca sativa HOM05D007491 ORTHO05D009489 4.5e-11 71.2 102 46.1
Manes.16G071301 Manihot esculenta HOM05D007491 ORTHO05D009489 5.9e-11 70.9 100 47.0
FAN26G2745 Fragaria x ananassa HOM05D001691 ORTHO05D001704 7.8e-11 70.5 89 49.4
Manes.03G022800 Manihot esculenta HOM05D007491 ORTHO05D009489 1.3e-10 69.7 89 53.9
CDE05G2495 Ceratophyllum demersum HOM05D001777 ORTHO05D001809 1.7e-10 69.3 91 45.1
Gohir.A06G094700 Gossypium hirsutum HOM05D007491 ORTHO05D009489 1.7e-10 69.3 112 45.5
Lsat_1_v5_gn_5_33441 Lactuca sativa HOM05D007491 ORTHO05D009489 1.7e-10 69.3 84 51.2
Nn3g18087 Nelumbo nucifera HOM05D007491 ORTHO05D009489 1.7e-10 69.3 92 46.7
BolC6t36089H Brassica oleracea HOM05D000490 ORTHO05D000785 3.8e-10 68.2 82 51.2
CDE05G0808 Ceratophyllum demersum HOM05D007491 ORTHO05D009489 3.8e-10 68.2 98 48.0
Os06g0332500 Oryza sativa ssp. japonica HOM05D007491 ORTHO05D009489 3.3e-09 65.1 93 47.3
AUR62009312 Chenopodium quinoa HOM05D007491 ORTHO05D009489 4.3e-09 64.7 94 44.7
Gorai.001G006300 Gossypium raimondii HOM05D007491 ORTHO05D009489 9.5e-09 63.5 93 46.2
FvH4_2g08780 Fragaria vesca HOM05D006766 ORTHO05D008534 1.6e-08 62.8 81 43.2
Ciclev10010763m.g Citrus clementina HOM05D007491 ORTHO05D009489 6.1e-08 60.8 52 59.6
Gohir.A12G028700 Gossypium hirsutum HOM05D006766 ORTHO05D008534 6.1e-08 60.8 78 47.4
Gohir.D12G028200 Gossypium hirsutum HOM05D006766 ORTHO05D008534 6.1e-08 60.8 78 47.4
Gorai.008G028800 Gossypium raimondii HOM05D006766 ORTHO05D008534 8.0e-08 60.5 77 46.8
Ah.16g106040 Amaranthus hybridus HOM05D007491 ORTHO05D009489 1.0e-07 60.1 87 43.7
Os02g0273900 Oryza sativa ssp. japonica HOM05D007491 ORTHO05D009489 1.8e-07 59.3 67 53.7
MBI01_g30748_MAGBIO Magnolia biondii HOM05D007491 ORTHO05D009489 3.0e-07 58.5 51 60.8
FAN20G1934 Fragaria x ananassa HOM05D004333 ORTHO05D005363 4.0e-07 58.2 83 39.8
Carub.0007s0121 Capsella rubella HOM05D006766 ORTHO05D008534 5.2e-07 57.8 93 40.9
Prupe.8G097200 Prunus persica HOM05D006766 ORTHO05D008534 5.2e-07 57.8 84 36.9
Gohir.D02G215600 Gossypium hirsutum HOM05D006766 ORTHO05D008534 6.8e-07 57.4 93 44.1
PSO541G0900 Papaver somniferum HOM05D006766 ORTHO05D008534 8.9e-07 57.0 63 49.2
Thecc.02G085300 Theobroma cacao HOM05D006766 ORTHO05D008534 8.9e-07 57.0 84 44.0
AL7G11290 Arabidopsis lyrata HOM05D006766 ORTHO05D008534 1.5e-06 56.2 93 39.8
Cpa.g.sc62.150 Carica papaya HOM05D006766 ORTHO05D008534 1.5e-06 56.2 83 44.6
COL.COLO4_25930 Corchorus olitorius HOM05D006766 ORTHO05D008534 1.5e-06 56.2 84 42.9
FAN27G0567 Fragaria x ananassa HOM05D006766 ORTHO05D008534 1.5e-06 56.2 79 39.2
PSO144G0109 Papaver somniferum HOM05D006766 ORTHO05D008534 1.5e-06 56.2 70 45.7
PSO144G0117 Papaver somniferum HOM05D006766 ORTHO05D008534 1.5e-06 56.2 70 45.7
SHI47168 Sapria himalayana HOM05D007491 ORTHO05D009489 1.5e-06 56.2 102 36.3
Ciclev10029674m.g Citrus clementina HOM05D006766 ORTHO05D008534 2.0e-06 55.8 83 41.0
FAN24G2015 Fragaria x ananassa HOM05D006766 ORTHO05D008534 2.0e-06 55.8 78 41.0
RcHm_v2.0_Chr6g0264231 Rosa chinensis HOM05D006766 ORTHO05D008534 2.0e-06 55.8 81 35.8
Haze_02383 Corylus avellana HOM05D001555 ORTHO05D001616 2.6e-06 55.5 89 39.3
FAN15G0619 Fragaria x ananassa HOM05D006766 ORTHO05D008534 3.4e-06 55.1 83 38.6
Sabra04G0102700 Salix brachista HOM05D006766 ORTHO05D008534 3.4e-06 55.1 83 38.6
Lalb_Chr03g0025701 Lupinus albus HOM05D006766 ORTHO05D008534 5.7e-06 54.3 93 34.4
Nn5g30294 Nelumbo nucifera HOM05D006766 ORTHO05D008534 5.7e-06 54.3 60 45.0
CARHR247400 Cardamine hirsuta HOM05D006766 ORTHO05D008534 7.5e-06 53.9 92 35.9
Rhsim11G0177000 Rhododendron simsii HOM05D006766 ORTHO05D008534 7.5e-06 53.9 79 44.3
Sp7g36570 Schrenkiella parvula HOM05D006766 ORTHO05D008534 9.8e-06 53.5 93 38.7


User provided reference genes

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