Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G311400 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 2.5e-99 365.5 197 100.0
VMungo0251G1747 Vigna mungo HOM05D003644 ORTHO05D004305 1.9e-86 322.8 198 88.9
Glyma.05G229100 Glycine max HOM05D003644 ORTHO05D004305 4.7e-74 281.6 200 78.0
Glyma.08G036100 Glycine max HOM05D003644 ORTHO05D004305 2.6e-64 249.2 206 71.8
Duzib187G1156 Durio zibethinus HOM05D003644 ORTHO05D004305 1.5e-56 223.4 203 65.0
Thecc.09G105500 Theobroma cacao HOM05D003644 ORTHO05D004305 7.6e-56 221.1 200 64.5
GSVIVG01015346001 Vitis vinifera HOM05D003644 ORTHO05D004305 1.7e-55 219.9 199 62.3
Glyma.09G193400 Glycine max HOM05D003644 ORTHO05D004305 2.9e-55 219.2 201 63.2
CiPaw.03G227900 Carya illinoinensis HOM05D003644 ORTHO05D004305 2.4e-54 216.1 203 66.0
Haze_25785 Corylus avellana HOM05D003644 ORTHO05D004305 3.5e-53 212.2 200 63.0
Glyma.01G145600 Glycine max HOM05D003644 ORTHO05D004305 3.5e-53 212.2 202 65.3
VMungo0464G0020 Vigna mungo HOM05D003644 ORTHO05D004305 1.8e-52 209.9 202 61.4
Duzib150G1566 Durio zibethinus HOM05D003644 ORTHO05D004305 3.9e-52 208.8 201 58.7
Psat1g044920 Pisum sativum HOM05D003644 ORTHO05D004305 1.1e-51 207.2 198 61.1
Lj2g0017641 Lotus japonicus HOM05D003644 ORTHO05D004305 9.6e-51 204.1 199 59.3
Phvul.004G168350 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 9.6e-51 204.1 202 59.9
Medtr6g088280 Medicago truncatula HOM05D003644 ORTHO05D004305 2.1e-50 203.0 198 58.6
Manes.16G112500 Manihot esculenta HOM05D003644 ORTHO05D004305 1.1e-49 200.7 198 58.6
QL02p044635 Quercus lobata HOM05D003644 ORTHO05D004305 1.8e-49 199.9 203 62.6
TPR.G34913 Trifolium pratense HOM05D003644 ORTHO05D004305 2.4e-49 199.5 207 55.1
Cpa.g.sc23.57 Carica papaya HOM05D003644 ORTHO05D004305 1.5e-48 196.8 198 54.5
Manes.03G024200 Manihot esculenta HOM05D003644 ORTHO05D004305 1.5e-48 196.8 200 55.0
Duzib168G0231 Durio zibethinus HOM05D003644 ORTHO05D004305 1.7e-47 193.4 202 60.9
arahy.Tifrunner.gnm1.ann1.TDG8V6 Arachis hypogaea HOM05D003644 ORTHO05D004305 2.9e-47 192.6 210 62.9
Potri.018G084100 Populus trichocarpa HOM05D003644 ORTHO05D004305 3.8e-47 192.2 202 61.4
Ciclev10010512m.g Citrus clementina HOM05D003644 ORTHO05D004305 6.0e-45 184.9 207 54.1
Sabra18G0072500 Salix brachista HOM05D003644 ORTHO05D004305 7.9e-45 184.5 225 55.6
Lalb_Chr22g0352641 Lupinus albus HOM05D003644 ORTHO05D004305 1.9e-43 179.9 211 58.3
TAR624G1421 Trochodendron aralioides HOM05D003644 ORTHO05D004305 4.3e-43 178.7 197 55.8
Prupe.7G225200 Prunus persica HOM05D003644 ORTHO05D004305 1.6e-42 176.8 213 53.5
CANSAT56G0200 Cannabis sativa HOM05D003644 ORTHO05D004305 2.1e-42 176.4 224 54.0
MBI04_g14930_MAGBIO Magnolia biondii HOM05D003644 ORTHO05D004305 3.7e-42 175.6 201 52.2
CSS0010496 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 4.8e-42 175.3 202 55.0
CSS0033414 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 4.8e-42 175.3 202 55.0
TAR636G2793 Trochodendron aralioides HOM05D003644 ORTHO05D004305 8.2e-42 174.5 200 56.0
Potri.006G161100 Populus trichocarpa HOM05D003644 ORTHO05D004305 1.4e-41 173.7 202 54.0
Gorai.010G073900 Gossypium raimondii HOM05D003644 ORTHO05D004305 2.4e-41 172.9 200 54.0
arahy.Tifrunner.gnm1.ann1.XM0XDL Arachis hypogaea HOM05D003644 ORTHO05D004305 5.3e-41 171.8 215 53.0
THA.LOC104814562 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 1.5e-40 170.2 205 51.7
Gorai.001G007300 Gossypium raimondii HOM05D003644 ORTHO05D004305 8.4e-39 164.5 201 58.7
Gohir.D06G063400 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.1e-38 164.1 197 52.3
Lalb_Chr05g0223051 Lupinus albus HOM05D003644 ORTHO05D004305 3.2e-38 162.5 177 57.1
MD02G1057600 Malus domestica HOM05D003644 ORTHO05D004305 3.2e-38 162.5 208 50.0
TWI34G1832 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 1.2e-37 160.6 210 49.5
Nn3g18137 Nelumbo nucifera HOM05D003644 ORTHO05D004305 1.6e-37 160.2 202 53.0
Oeu015581.1 Olea europaea HOM05D003644 ORTHO05D004305 2.1e-37 159.8 197 50.3
CSS0008241 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 3.9e-36 155.6 205 51.2
Gohir.D07G007600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.1e-35 154.1 201 57.7
MD15G1192000 Malus domestica HOM05D003644 ORTHO05D004305 1.5e-35 153.7 205 50.7
Gohir.A06G064800 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.9e-35 153.3 200 50.0
Gohir.A05G025200 Gossypium hirsutum HOM05D003644 ORTHO05D004305 3.3e-35 152.5 211 49.8
Nn2g11654 Nelumbo nucifera HOM05D003644 ORTHO05D004305 3.3e-35 152.5 205 47.3
Dinv41640 Davidia involucrata HOM05D003644 ORTHO05D004305 4.3e-35 152.1 164 61.0
Gohir.D05G026700 Gossypium hirsutum HOM05D003644 ORTHO05D004305 5.7e-35 151.8 211 49.3
Gohir.A07G004600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 9.7e-35 151.0 190 58.4
MSTRG.6013 Avicennia marina HOM05D003644 ORTHO05D004305 1.6e-34 150.2 204 48.5
Peaxi162Scf00665g00003 Petunia axillaris HOM05D003644 ORTHO05D004305 6.3e-34 148.3 202 47.5
arahy.Tifrunner.gnm1.ann1.X7P2RE Arachis hypogaea HOM05D003644 ORTHO05D004305 8.2e-34 147.9 143 67.8
Gorai.009G026800 Gossypium raimondii HOM05D003644 ORTHO05D004305 1.1e-33 147.5 219 47.5
SalBow6G0047 Salvia bowleyana HOM05D003644 ORTHO05D004305 2.4e-33 146.4 210 48.1
Atru.chr7.1390 Acer truncatum HOM05D003644 ORTHO05D004305 9.0e-33 144.4 211 46.0
Peaxi162Scf00231g00061 Petunia axillaris HOM05D003644 ORTHO05D004305 4.5e-32 142.1 206 48.1
FAN26G3023 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.0e-31 141.0 215 47.9
TWI32G0193 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 1.0e-31 141.0 202 46.5
ClCG06G008860 Citrullus lanatus HOM05D003644 ORTHO05D004305 2.2e-31 139.8 215 46.0
FAN26G0903 Fragaria x ananassa HOM05D003644 ORTHO05D004305 2.2e-31 139.8 216 47.7
Thhalv10002311m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 2.9e-31 139.4 207 44.9
FAN19G0617 Fragaria x ananassa HOM05D003644 ORTHO05D004305 3.8e-31 139.0 214 47.7
DCAR_012057 Daucus carota HOM05D003644 ORTHO05D004305 8.5e-31 137.9 207 48.3
FvH4_1g05660 Fragaria vesca HOM05D003644 ORTHO05D004305 1.1e-30 137.5 214 47.2
COL.COLO4_34805 Corchorus olitorius HOM05D003644 ORTHO05D004305 1.4e-30 137.1 209 45.5
arahy.Tifrunner.gnm1.ann1.R9ZCFD Arachis hypogaea HOM05D003644 ORTHO05D004305 3.2e-30 136.0 173 51.4
FAN28G1311 Fragaria x ananassa HOM05D003644 ORTHO05D004305 3.2e-30 136.0 225 45.3
Lalb_Chr16g0388081 Lupinus albus HOM05D003644 ORTHO05D004305 4.2e-30 135.6 119 60.5
PGSC0003DMG400003139 Solanum tuberosum HOM05D003644 ORTHO05D004305 4.2e-30 135.6 200 45.5
Cc06_g10070 Coffea canephora HOM05D003644 ORTHO05D004305 5.5e-30 135.2 204 52.0
AL3G48010 Arabidopsis lyrata HOM05D003644 ORTHO05D004305 7.2e-30 134.8 206 42.7
THA.LOC104804017 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 7.2e-30 134.8 201 43.8
BcaC07g41224 Brassica carinata HOM05D003644 ORTHO05D004305 9.4e-30 134.4 206 44.2
AT4G28840 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 1.2e-29 134.0 206 43.7
CARHR110580 Cardamine hirsuta HOM05D003644 ORTHO05D004305 2.1e-29 133.3 206 43.2
C08p42300 Brassica napus HOM05D003644 ORTHO05D004305 2.7e-29 132.9 206 43.7
BolC8t51790H Brassica oleracea HOM05D003644 ORTHO05D004305 2.7e-29 132.9 206 43.7
PGR142G1369 Punica granatum HOM05D003644 ORTHO05D004305 3.6e-29 132.5 213 46.5
TPR.G23503 Trifolium pratense HOM05D003644 ORTHO05D004305 4.6e-29 132.1 170 50.6
MSTRG.19571 Avicennia marina HOM05D003644 ORTHO05D004305 6.1e-29 131.7 202 45.0
A09p59020 Brassica napus HOM05D003644 ORTHO05D004305 1.0e-28 131.0 206 42.7
BraA09t41288Z Brassica rapa HOM05D003644 ORTHO05D004305 1.0e-28 131.0 206 42.7
CsaV3_1G021830 Cucumis sativus L. HOM05D003644 ORTHO05D004305 1.4e-28 130.6 211 45.5
Carub.0007s1180 Capsella rubella HOM05D003644 ORTHO05D004305 3.0e-28 129.4 211 43.1
Sed0013314 Sechium edule HOM05D003644 ORTHO05D004305 5.1e-28 128.6 202 44.6
FAN23G2152 Fragaria x ananassa HOM05D003644 ORTHO05D004305 8.8e-28 127.9 224 44.2
PGSC0003DMG400000374 Solanum tuberosum HOM05D003644 ORTHO05D004305 2.0e-27 126.7 207 44.4
BcaC06g32601 Brassica carinata HOM05D003644 ORTHO05D004305 2.5e-27 126.3 208 42.8
Sopen12g003210 Solanum pennellii HOM05D003644 ORTHO05D004305 5.7e-27 125.2 207 44.4
Sp7g26840 Schrenkiella parvula HOM05D003644 ORTHO05D004305 9.7e-27 124.4 175 48.0
Sopen07g007520 Solanum pennellii HOM05D003644 ORTHO05D004305 9.7e-27 124.4 201 43.3
Oeu002262.2 Olea europaea HOM05D003644 ORTHO05D004305 1.3e-26 124.0 135 54.1
MELO3C024703.2 Cucumis melo HOM05D003644 ORTHO05D004305 1.7e-26 123.6 212 44.3
Sed0019018 Sechium edule HOM05D003644 ORTHO05D004305 1.7e-26 123.6 210 40.5
AUR62010940 Chenopodium quinoa HOM05D003644 ORTHO05D004305 2.2e-26 123.2 207 41.5
ECA234G2378 Erigeron canadensis HOM05D003644 ORTHO05D004305 2.2e-26 123.2 194 46.4
Sp3g33380 Schrenkiella parvula HOM05D003644 ORTHO05D004305 2.2e-26 123.2 211 43.6
BolC7t46126H Brassica oleracea HOM05D003644 ORTHO05D004305 2.8e-26 122.9 208 42.8
A03p58450 Brassica napus HOM05D003644 ORTHO05D004305 4.8e-26 122.1 208 42.8
C01p10620 Brassica napus HOM05D003644 ORTHO05D004305 6.3e-26 121.7 207 43.0
BraA01t00855Z Brassica rapa HOM05D003644 ORTHO05D004305 6.3e-26 121.7 207 43.0
CsaV3_2G002110 Cucumis sativus L. HOM05D003644 ORTHO05D004305 8.2e-26 121.3 209 41.1
A01p09070 Brassica napus HOM05D003644 ORTHO05D004305 1.1e-25 120.9 207 43.0
BolC1t01024H Brassica oleracea HOM05D003644 ORTHO05D004305 1.1e-25 120.9 207 42.5
PSO566G0277 Papaver somniferum HOM05D003644 ORTHO05D004305 1.1e-25 120.9 214 43.0
C07p56470 Brassica napus HOM05D003644 ORTHO05D004305 1.4e-25 120.6 205 41.5
BcaNung01359 Brassica carinata HOM05D003644 ORTHO05D004305 1.8e-25 120.2 199 41.7
PSO782G2161 Papaver somniferum HOM05D003644 ORTHO05D004305 9.1e-25 117.9 214 42.5
ClCG11G002330 Citrullus lanatus HOM05D003644 ORTHO05D004305 2.6e-24 116.3 219 38.8
Hma1.2p1_0945F.1_g240090 Hydrangea macrophylla HOM05D003644 ORTHO05D004305 4.5e-24 115.5 206 44.7
RcHm_v2.0_Chr2g0091291 Rosa chinensis HOM05D003644 ORTHO05D004305 1.0e-23 114.4 170 48.8
MELO3C004570.2 Cucumis melo HOM05D003644 ORTHO05D004305 1.3e-23 114.0 215 40.5
BcaC09g51666 Brassica carinata HOM05D003644 ORTHO05D004305 2.2e-23 113.2 195 43.1
CAN.G1774.6 Capsicum annuum HOM05D003644 ORTHO05D004305 3.8e-23 112.5 195 45.1
BolC7t40541H Brassica oleracea HOM05D003644 ORTHO05D004305 5.5e-22 108.6 212 40.6
Actinidia20403 Actinidia chinensis HOM05D003644 ORTHO05D004305 7.2e-22 108.2 194 42.8
Lsat_1_v5_gn_8_96040 Lactuca sativa HOM05D003644 ORTHO05D004305 1.2e-21 107.5 141 48.9
Aa31LG2G21540 Aethionema arabicum HOM05D003644 ORTHO05D004305 2.7e-21 106.3 141 44.7
Sed0028016 Sechium edule HOM05D003644 ORTHO05D004305 2.7e-21 106.3 207 36.7
Carub.0003s3436 Capsella rubella HOM05D003644 ORTHO05D004305 3.6e-21 105.9 206 37.4
PGR102G0050 Punica granatum HOM05D003644 ORTHO05D004305 4.7e-21 105.5 178 42.7
Aa31LG8G17030 Aethionema arabicum HOM05D003644 ORTHO05D004305 6.1e-21 105.1 182 39.0
Thhalv10026355m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 6.1e-21 105.1 202 40.6
DCAR_010477 Daucus carota HOM05D003644 ORTHO05D004305 1.8e-20 103.6 197 40.6
Aqoxy7G01525 Aquilegia oxysepala HOM05D003644 ORTHO05D004305 2.3e-20 103.2 197 40.1
Hund09226 Selenicereus undatus HOM05D003644 ORTHO05D004305 2.3e-20 103.2 191 39.3
BcaB08g34898 Brassica carinata HOM05D003644 ORTHO05D004305 5.1e-20 102.1 206 37.4
BcaC07g41225 Brassica carinata HOM05D003644 ORTHO05D004305 5.1e-20 102.1 206 37.4
HanXRQChr12g0358181 Helianthus annuus HOM05D003644 ORTHO05D004305 1.1e-19 100.9 196 40.3
BcaNung04091 Brassica carinata HOM05D003644 ORTHO05D004305 4.4e-19 99.0 206 37.4
C07p01040 Brassica napus HOM05D003644 ORTHO05D004305 4.4e-19 99.0 209 41.6
COL.COLO4_17464 Corchorus olitorius HOM05D003644 ORTHO05D004305 7.4e-19 98.2 162 38.9
Migut.K00491 Erythranthe guttata HOM05D003644 ORTHO05D004305 2.2e-18 96.7 204 37.7
Hund09225 Selenicereus undatus HOM05D003644 ORTHO05D004305 8.2e-18 94.7 206 36.9
Actinidia09436 Actinidia chinensis HOM05D003644 ORTHO05D004305 1.1e-17 94.4 208 38.5
Psat7g014640 Pisum sativum HOM05D003644 ORTHO05D004305 1.4e-17 94.0 167 44.3
C09p15050 Brassica napus HOM05D003644 ORTHO05D004305 1.8e-17 93.6 206 37.9
Sc18g0001380 Simmondsia chinensis HOM05D003644 ORTHO05D004305 2.4e-17 93.2 206 36.4
EL10Ac8g18428 Beta vulgaris HOM05D003644 ORTHO05D004305 3.1e-17 92.8 204 35.8
A09p12690 Brassica napus HOM05D003644 ORTHO05D004305 5.3e-17 92.0 207 39.1
HanXRQChr14g0449921 Helianthus annuus HOM05D003644 ORTHO05D004305 1.2e-16 90.9 195 37.9
BcaB03g16807 Brassica carinata HOM05D003644 ORTHO05D004305 2.0e-16 90.1 205 37.6
Actinidia32668 Actinidia chinensis HOM05D003644 ORTHO05D004305 1.0e-15 87.8 153 42.5
BcaC04g22808 Brassica carinata HOM05D003644 ORTHO05D004305 1.7e-15 87.0 209 39.7
BolC9t54408H Brassica oleracea HOM05D003644 ORTHO05D004305 1.7e-15 87.0 209 39.7
A07p00580 Brassica napus HOM05D003644 ORTHO05D004305 2.2e-15 86.7 204 37.3
Nitab4.5_0014820g0010 Nicotiana tabacum HOM05D003644 ORTHO05D004305 2.2e-15 86.7 143 43.4
BcaC06g36690 Brassica carinata HOM05D003644 ORTHO05D004305 3.8e-15 85.9 118 47.5
AT2G20080 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 6.5e-15 85.1 206 33.0
Hund26238 Selenicereus undatus HOM05D003644 ORTHO05D004305 5.5e-14 82.0 200 36.5
Sc08g0007690 Simmondsia chinensis HOM05D003644 ORTHO05D004305 1.2e-13 80.9 208 37.5
Medtr8g102890 Medicago truncatula HOM05D003644 ORTHO05D004305 2.7e-13 79.7 92 50.0
BraA07t27854Z Brassica rapa HOM05D003644 ORTHO05D004305 3.6e-13 79.3 135 42.2
Nitab4.5_0002431g0010 Nicotiana tabacum HOM05D003644 ORTHO05D004305 6.1e-13 78.6 90 51.1
Eucgr.C01280 Eucalyptus grandis HOM05D003644 ORTHO05D004305 1.0e-12 77.8 202 33.7
Solyc12g007240.3 Solanum lycopersicum HOM05D003644 ORTHO05D004305 1.0e-12 77.8 140 38.6
Rhsim05G0043500 Rhododendron simsii HOM05D003644 ORTHO05D004305 3.0e-12 76.3 214 35.0
Zm00001eb156860 Zea mays HOM05D003644 ORTHO05D004305 5.2e-12 75.5 203 35.5
AL7G23640 Arabidopsis lyrata HOM05D003644 ORTHO05D004305 8.8e-12 74.7 121 38.8
Zm00001eb360290 Zea mays HOM05D003644 ORTHO05D004305 8.8e-12 74.7 209 34.4
Lsat_1_v5_gn_5_147641 Lactuca sativa HOM05D003644 ORTHO05D004305 3.3e-11 72.8 154 38.3
Oeu018442.1 Olea europaea HOM05D003644 ORTHO05D004305 9.7e-11 71.2 108 49.1
HPP92_019983 Vanilla planifolia HOM05D003644 ORTHO05D004305 9.7e-11 71.2 203 36.0
Os05g0559316 Oryza sativa ssp. japonica HOM05D003644 ORTHO05D004305 2.2e-10 70.1 82 54.9
Sc08g0007700 Simmondsia chinensis HOM05D003644 ORTHO05D004305 6.3e-10 68.6 163 33.1
Nitab4.5_0001004g0030 Nicotiana tabacum HOM05D003644 ORTHO05D004305 1.1e-09 67.8 128 41.4
BraA09t36915Z Brassica rapa HOM05D003644 ORTHO05D004305 1.8e-09 67.0 64 56.2
Solyc07g018370.3 Solanum lycopersicum HOM05D003644 ORTHO05D004305 2.4e-09 66.6 121 39.7
BcaB03g16801 Brassica carinata HOM05D003644 ORTHO05D004305 3.1e-09 66.2 60 56.7
Ah.09g230900 Amaranthus hybridus HOM05D003644 ORTHO05D004305 7.0e-09 65.1 218 32.1
Zm00001eb343410 Zea mays HOM05D003644 ORTHO05D004305 4.5e-08 62.4 185 33.0
unitig_578.g15927 Utricularia gibba HOM05D003644 ORTHO05D004305 5.9e-08 62.0 126 38.1
Os01g0676900 Oryza sativa ssp. japonica HOM05D003644 ORTHO05D004305 8.5e-07 58.2 202 30.7
CARHR236630 Cardamine hirsuta HOM05D003644 ORTHO05D004305 1.1e-06 57.8 62 53.2
HPP92_024624 Vanilla planifolia HOM05D003644 ORTHO05D004305 2.5e-06 56.6 207 32.9


User provided reference genes

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