Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G309000 Phaseolus vulgaris HOM05D002451 ORTHO05D007901 4.8e-235 817.4 395 100.0
Glyma.05G227000 Glycine max HOM05D002451 ORTHO05D007901 9.2e-194 680.2 399 85.0
Lalb_Chr05g0223211 Lupinus albus HOM05D002451 ORTHO05D007901 5.6e-183 644.4 417 77.2
Lj4g0024953 Lotus japonicus HOM05D002451 ORTHO05D007901 2.1e-182 642.5 418 76.3
Ca_17363_v3 Cicer arietinum L. HOM05D002451 ORTHO05D007901 4.0e-173 611.7 415 74.9
Medtr8g102540 Medicago truncatula HOM05D002451 ORTHO05D007901 2.2e-171 605.9 394 77.2
Psat7g017040 Pisum sativum HOM05D002451 ORTHO05D007901 3.8e-171 605.1 403 75.2
VMungo0251G0535 Vigna mungo HOM05D002451 ORTHO05D007901 7.3e-167 590.9 318 91.2
arahy.Tifrunner.gnm1.ann1.GUCG30 Arachis hypogaea HOM05D002451 ORTHO05D007901 3.2e-162 575.5 389 73.3
Cfa003184 Carpinus fangiana HOM05D002451 ORTHO05D007901 1.2e-153 547.0 407 67.8
CiPaw.03G225500 Carya illinoinensis HOM05D002451 ORTHO05D007901 1.6e-150 536.6 403 66.3
Atru.chr7.1460 Acer truncatum HOM05D002451 ORTHO05D007901 1.1e-149 533.9 406 66.3
Gorai.009G027400 Gossypium raimondii HOM05D002451 ORTHO05D007901 2.2e-147 526.2 393 66.2
Duzib168G1562 Durio zibethinus HOM05D002451 ORTHO05D007901 1.4e-146 523.5 399 66.2
Gohir.A05G025800 Gossypium hirsutum HOM05D002451 ORTHO05D007901 1.2e-145 520.4 393 65.9
Thecc.09G101000 Theobroma cacao HOM05D002451 ORTHO05D007901 1.6e-145 520.0 402 64.7
CsaV3_2G001930 Cucumis sativus L. HOM05D002451 ORTHO05D007901 4.6e-145 518.5 405 64.2
Eucgr.C00999 Eucalyptus grandis HOM05D002451 ORTHO05D007901 7.9e-145 517.7 406 63.5
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 5.1e-144 515.0 406 63.3
ClCG11G002150 Citrullus lanatus HOM05D002451 ORTHO05D007901 8.7e-144 514.2 406 64.3
GSVIVG01015305001 Vitis vinifera HOM05D002451 ORTHO05D007901 2.5e-143 512.7 405 62.7
Nn8g39075 Nelumbo nucifera HOM05D002451 ORTHO05D007901 9.6e-143 510.8 421 62.5
FvH4_1g06070 Fragaria vesca HOM05D002451 ORTHO05D007901 1.8e-141 506.5 405 63.7
FAN23G2627 Fragaria x ananassa HOM05D002451 ORTHO05D007901 2.4e-141 506.1 405 63.7
CSS0003026 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D007901 4.0e-141 505.4 406 63.1
Potri.018G087300 Populus trichocarpa HOM05D002451 ORTHO05D007901 4.0e-141 505.4 406 62.8
FAN28G1338 Fragaria x ananassa HOM05D002451 ORTHO05D007901 6.9e-141 504.6 405 64.0
Manes.16G108300 Manihot esculenta HOM05D002451 ORTHO05D007901 6.9e-141 504.6 406 64.0
vmacro06250 Vaccinium macrocarpon HOM05D002451 ORTHO05D007901 1.3e-139 500.4 413 62.5
Aqoxy7G01412 Aquilegia oxysepala HOM05D002451 ORTHO05D007901 1.1e-138 497.3 407 59.7
FAN26G3439 Fragaria x ananassa HOM05D002451 ORTHO05D007901 1.4e-138 496.9 405 63.7
RcHm_v2.0_Chr2g0091831 Rosa chinensis HOM05D002451 ORTHO05D007901 1.4e-138 496.9 417 61.6
CANSAT56G2212 Cannabis sativa HOM05D002451 ORTHO05D007901 2.5e-138 496.1 406 61.1
Solyc12g008450.2 Solanum lycopersicum HOM05D002451 ORTHO05D007901 9.3e-138 494.2 406 61.1
PGSC0003DMG400000298 Solanum tuberosum HOM05D002451 ORTHO05D007901 4.6e-137 491.9 406 61.1
Actinidia32654 Actinidia chinensis HOM05D002451 ORTHO05D007901 6.0e-137 491.5 406 61.1
FAN26G0432 Fragaria x ananassa HOM05D002451 ORTHO05D007901 6.0e-137 491.5 405 64.0
TPR.G23434 Trifolium pratense HOM05D002451 ORTHO05D007901 1.0e-136 490.7 359 70.5
MD02G1065300 Malus domestica HOM05D002451 ORTHO05D007901 3.9e-136 488.8 409 62.3
Sopen12g003400 Solanum pennellii HOM05D002451 ORTHO05D007901 8.7e-136 487.6 406 60.6
Hma1.2p1_0571F.1_g180690 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 1.1e-135 487.3 404 61.4
EL10Ac8g18383 Beta vulgaris HOM05D002451 ORTHO05D007901 1.5e-135 486.9 425 58.8
Hma1.2p1_0571F.1_g180680 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 1.5e-135 486.9 406 61.8
Nitab4.5_0005668g0020 Nicotiana tabacum HOM05D002451 ORTHO05D007901 4.3e-135 485.3 397 60.7
AT2G40570 Arabidopsis thaliana HOM05D002451 ORTHO05D007901 5.7e-135 485.0 396 60.9
SGA_v2.0_scaffold843G53664 Striga asiatica HOM05D002451 ORTHO05D007901 3.7e-134 482.3 407 60.0
Cc06_g10440 Coffea canephora HOM05D002451 ORTHO05D007901 4.8e-134 481.9 397 60.7
MBI04_g20306_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D007901 6.3e-134 481.5 404 60.4
BcaB06g29152 Brassica carinata HOM05D002451 ORTHO05D007901 1.4e-133 480.3 399 59.1
A04p31020 Brassica napus HOM05D002451 ORTHO05D007901 1.4e-133 480.3 399 58.6
BcaC02g07322 Brassica carinata HOM05D002451 ORTHO05D007901 1.8e-133 479.9 399 58.6
BraA04t18559Z Brassica rapa HOM05D002451 ORTHO05D007901 2.0e-132 476.5 399 58.9
Thhalv10016464m.g Eutrema salsugineum HOM05D002451 ORTHO05D007901 4.5e-132 475.3 396 59.8
Sp4g22900 Schrenkiella parvula HOM05D002451 ORTHO05D007901 4.5e-132 475.3 403 58.3
BolC4t28342H Brassica oleracea HOM05D002451 ORTHO05D007901 5.9e-132 474.9 399 58.4
Rhsim03G0237000 Rhododendron simsii HOM05D002451 ORTHO05D007901 5.9e-132 474.9 412 59.0
C04p68410 Brassica napus HOM05D002451 ORTHO05D007901 1.3e-131 473.8 399 57.9
Prupe.7G220200 Prunus persica HOM05D002451 ORTHO05D007901 1.7e-131 473.4 362 66.0
MSTRG.10604 Avicennia marina HOM05D002451 ORTHO05D007901 2.2e-131 473.0 405 59.3
AL4G38420 Arabidopsis lyrata HOM05D002451 ORTHO05D007901 2.9e-131 472.6 395 60.5
Sabra18G0075400 Salix brachista HOM05D002451 ORTHO05D007901 1.4e-130 470.3 447 56.4
Sc08g0008000 Simmondsia chinensis HOM05D002451 ORTHO05D007901 4.2e-130 468.8 397 60.2
Aa31LG3G1530 Aethionema arabicum HOM05D002451 ORTHO05D007901 2.7e-129 466.1 402 58.0
Oeu053181.2 Olea europaea HOM05D002451 ORTHO05D007901 2.7e-129 466.1 400 59.5
CARHR135670 Cardamine hirsuta HOM05D002451 ORTHO05D007901 7.9e-129 464.5 399 59.4
MELO3C004587.2 Cucumis melo HOM05D002451 ORTHO05D007901 3.9e-128 462.2 406 58.9
Lsat_1_v5_gn_7_39761 Lactuca sativa HOM05D002451 ORTHO05D007901 1.1e-127 460.7 381 60.1
Dinv36690 Davidia involucrata HOM05D002451 ORTHO05D007901 3.3e-127 459.1 377 62.1
COL.COLO4_34751 Corchorus olitorius HOM05D002451 ORTHO05D007901 4.3e-127 458.8 391 60.1
HPP92_009804 Vanilla planifolia HOM05D002451 ORTHO05D007901 2.8e-126 456.1 404 57.9
Lj7A665T28 Lonicera japonica HOM05D002451 ORTHO05D007901 1.8e-125 453.4 363 61.2
ATR0705G045 Amborella trichopoda HOM05D002451 ORTHO05D007901 3.1e-125 452.6 417 55.9
Carub.0004s2284 Capsella rubella HOM05D002451 ORTHO05D007901 2.6e-124 449.5 366 62.0
TWI34G1500 Tripterygium wilfordii HOM05D002451 ORTHO05D007901 7.7e-124 448.0 362 64.9
Migut.K00538 Erythranthe guttata HOM05D002451 ORTHO05D007901 3.8e-123 445.7 406 55.9
THA.LOC104807537 Tarenaya hassleriana HOM05D002451 ORTHO05D007901 1.4e-122 443.7 394 58.6
Os06g0555500 Oryza sativa ssp. japonica HOM05D002451 ORTHO05D007901 7.9e-121 438.0 407 56.0
AUR62021412 Chenopodium quinoa HOM05D002451 ORTHO05D007901 5.1e-120 435.3 386 57.5
SHI02693 Sapria himalayana HOM05D002451 ORTHO05D007901 9.1e-117 424.5 418 54.1
CAN.G1642.1 Capsicum annuum HOM05D002451 ORTHO05D007901 1.2e-116 424.1 405 53.6
PSO063G0860 Papaver somniferum HOM05D002451 ORTHO05D007901 3.4e-116 422.5 350 63.4
CDE08G0666 Ceratophyllum demersum HOM05D002257 ORTHO05D007901 1.3e-115 420.6 357 57.4
SalBow1G8658 Salvia bowleyana HOM05D002451 ORTHO05D007901 6.5e-115 418.3 423 52.7
SalBow1G3696 Salvia bowleyana HOM05D002451 ORTHO05D007901 3.2e-114 416.0 415 54.2
Ah.14g083250 Amaranthus hybridus HOM05D002451 ORTHO05D007901 5.5e-114 415.2 404 54.7
DCAR_012039 Daucus carota HOM05D002451 ORTHO05D007901 1.2e-113 414.1 361 60.4
PGR142G3373 Punica granatum HOM05D002451 ORTHO05D007901 1.2e-113 414.1 353 60.9
AUR62010914 Chenopodium quinoa HOM05D002451 ORTHO05D007901 8.0e-113 411.4 397 55.2
SEGI_00986 Sequoiadendron giganteum HOM05D002451 ORTHO05D007901 5.2e-112 408.7 431 51.7
Hund09106 Selenicereus undatus HOM05D002451 ORTHO05D007901 4.4e-111 405.6 408 55.4
Sed0018496 Sechium edule HOM05D002451 ORTHO05D007901 4.5e-108 395.6 333 61.0
Peaxi162Scf00665g00035 Petunia axillaris HOM05D002451 ORTHO05D007901 2.3e-104 383.3 408 50.7
Gohir.D05G027300 Gossypium hirsutum HOM05D002451 ORTHO05D007901 9.8e-95 351.3 257 67.7
Mapoly0002s0306 Marchantia polymorpha HOM05D002451 ORTHO05D007901 2.2e-94 350.1 436 44.3
Pp3c1_19270 Physcomitrium patens HOM05D002451 ORTHO05D007901 4.8e-94 349.0 459 42.7
TAR636G1745 Trochodendron aralioides HOM05D002451 ORTHO05D007901 1.8e-93 347.1 364 52.7
Zm00001eb384640 Zea mays HOM05D002451 ORTHO05D007901 5.4e-93 345.5 361 54.3
FAN19G3003 Fragaria x ananassa HOM05D002451 ORTHO05D007901 9.1e-93 344.7 298 61.1
AagrBONN_evm.TU.Sc2ySwM_117.4166 Anthoceros agrestis HOM05D002451 ORTHO05D007901 1.6e-92 344.0 388 47.2
Ciclev10008594m.g Citrus clementina HOM05D002451 ORTHO05D007901 2.2e-86 323.6 263 62.7
CAN.G1241.33 Capsicum annuum HOM05D002451 ORTHO05D007901 1.2e-81 307.8 263 59.7
SMO118G0195 Selaginella moellendorffii HOM05D002451 ORTHO05D007901 2.2e-78 297.0 379 44.3
SpUn0061_0010 Schrenkiella parvula HOM05D002451 ORTHO05D007901 8.6e-75 285.0 258 56.2
SGA_v2.0_scaffold4172G54434 Striga asiatica HOM05D002451 ORTHO05D007901 4.7e-73 279.3 238 59.2
unitig_46.g18399 Utricularia gibba HOM05D002451 ORTHO05D007901 3.4e-71 273.1 259 54.4
HanXRQChr09g0238871 Helianthus annuus HOM05D002451 ORTHO05D007901 2.2e-70 270.4 258 54.3
ECA240G2417 Erigeron canadensis HOM05D002451 ORTHO05D007901 8.3e-62 241.9 405 39.0
MD15G1196200 Malus domestica HOM05D002451 ORTHO05D007901 2.1e-57 227.3 386 37.3
CDE02G1621 Ceratophyllum demersum HOM05D002451 ORTHO05D007901 1.3e-46 191.4 152 59.9
CAN.G4309.1 Capsicum annuum HOM05D002451 ORTHO05D007901 5.4e-45 186.0 146 59.6
CBR_g41536 Chara braunii HOM05D002451 ORTHO05D007901 5.1e-43 179.5 184 50.0
Nn1g07675 Nelumbo nucifera HOM05D002451 ORTHO05D007901 3.4e-39 166.8 109 70.6
SGA_v2.0_scaffold19G08736 Striga asiatica HOM05D002451 ORTHO05D007901 2.2e-38 164.1 125 64.8
Cpa.g.c44357 Carica papaya HOM05D002451 ORTHO05D007901 7.4e-34 149.1 139 60.4
MCO03G573 Micromonas commoda HOM05D002451 ORTHO05D007901 1.2e-28 131.7 431 28.3
Cre06.g272100 Chlamydomonas reinhardtii HOM05D002451 ORTHO05D007901 5.6e-26 122.9 241 31.5
Ciclev10010851m.g Citrus clementina HOM05D002451 ORTHO05D007901 9.0e-24 115.5 71 70.4
TPR.G23499 Trifolium pratense HOM05D002451 ORTHO05D007901 3.2e-21 107.1 65 76.9
PRCOL_00006066 Prasinoderma coloniale HOM05D000173 ORTHO05D004400 7.1e-21 105.9 443 24.6
CBR_g41538 Chara braunii HOM05D002451 ORTHO05D007901 4.6e-20 103.2 125 45.6


User provided reference genes

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