Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G303500 Phaseolus vulgaris HOM05D005081 ORTHO05D005506 6.6e-111 404.1 204 100.0
VMungo0251G2709 Vigna mungo HOM05D005081 ORTHO05D005506 2.1e-85 319.3 209 82.3
Glyma.08G028300 Glycine max HOM05D005081 ORTHO05D005506 3.5e-72 275.4 209 71.8
Glyma.05G221800 Glycine max HOM05D005081 ORTHO05D005506 5.1e-63 245.0 214 64.0
Medtr8g101480 Medicago truncatula HOM05D005081 ORTHO05D005506 8.7e-39 164.5 214 50.9
Lj4g0023825 Lotus japonicus HOM05D005081 ORTHO05D005506 2.5e-38 162.9 222 51.8
TPR.G25464 Trifolium pratense HOM05D005081 ORTHO05D005506 6.5e-34 148.3 221 46.6
Ca_17410_v3 Cicer arietinum L. HOM05D005081 ORTHO05D005506 2.7e-32 142.9 230 47.4
Lalb_Chr05g0223691 Lupinus albus HOM05D005081 ORTHO05D005506 8.2e-29 131.3 219 45.7
QL11p009451 Quercus lobata HOM05D005081 ORTHO05D005506 1.5e-27 127.1 223 40.8
Actinidia29969 Actinidia chinensis HOM05D005081 ORTHO05D005506 1.3e-26 124.0 252 37.7
Psat7g022000 Pisum sativum HOM05D005081 ORTHO05D005506 1.3e-26 124.0 218 41.3
arahy.Tifrunner.gnm1.ann1.FV9V0P Arachis hypogaea HOM05D005081 ORTHO05D005506 5.0e-26 122.1 246 39.4
Rhsim01G0113200 Rhododendron simsii HOM05D005081 ORTHO05D005506 1.4e-25 120.6 251 38.2
arahy.Tifrunner.gnm1.ann1.TAK2NC Arachis hypogaea HOM05D005081 ORTHO05D005506 5.5e-25 118.6 241 39.4
GSVIVG01035163001 Vitis vinifera HOM05D005081 ORTHO05D005506 1.6e-24 117.1 236 39.8
Duzib170G0058 Durio zibethinus HOM05D005081 ORTHO05D005506 2.1e-24 116.7 218 40.8
Manes.15G189400 Manihot esculenta HOM05D005081 ORTHO05D005506 2.1e-24 116.7 214 39.3
Haze_19038 Corylus avellana HOM05D001026 ORTHO05D003027 1.4e-23 114.0 219 41.6
Migut.L01903 Erythranthe guttata HOM05D005081 ORTHO05D005506 1.4e-23 114.0 241 37.8
Actinidia38513 Actinidia chinensis HOM05D005081 ORTHO05D005506 2.3e-23 113.2 231 37.7
MD13G1236100 Malus domestica HOM05D005081 ORTHO05D005506 5.2e-23 112.1 206 39.8
Nitab4.5_0010835g0010 Nicotiana tabacum HOM05D005081 ORTHO05D005506 5.2e-23 112.1 225 37.3
CiPaw.15G154600 Carya illinoinensis HOM05D005081 ORTHO05D005506 1.5e-22 110.5 236 38.1
FAN12G4058 Fragaria x ananassa HOM05D005081 ORTHO05D005506 1.5e-22 110.5 218 39.9
Nitab4.5_0000833g0060 Nicotiana tabacum HOM05D005081 ORTHO05D005506 3.3e-22 109.4 224 37.1
Duzib168G1013 Durio zibethinus HOM05D005081 ORTHO05D005506 5.7e-22 108.6 220 41.4
FvH4_4g06450 Fragaria vesca HOM05D005081 ORTHO05D005506 7.4e-22 108.2 218 39.4
FAN22G0520 Fragaria x ananassa HOM05D005081 ORTHO05D005506 9.7e-22 107.8 216 40.3
FAN17G0390 Fragaria x ananassa HOM05D005081 ORTHO05D005506 1.3e-21 107.5 216 39.8
vmacro20793 Vaccinium macrocarpon HOM05D005081 ORTHO05D005506 1.7e-21 107.1 245 35.9
Gorai.012G008600 Gossypium raimondii HOM05D005081 ORTHO05D005506 2.2e-21 106.7 224 38.4
Peaxi162Scf00315g00813 Petunia axillaris HOM05D005081 ORTHO05D005506 2.8e-21 106.3 239 35.6
Gohir.A05G408500 Gossypium hirsutum HOM05D005081 ORTHO05D005506 3.7e-21 105.9 224 38.4
Gohir.D04G006900 Gossypium hirsutum HOM05D005081 ORTHO05D005506 3.7e-21 105.9 224 38.4
Cpa.g.sc115.44 Carica papaya HOM05D005081 ORTHO05D005506 4.8e-21 105.5 229 38.0
ECA240G1118 Erigeron canadensis HOM05D005081 ORTHO05D005506 4.8e-21 105.5 239 34.7
Thecc.09G189400 Theobroma cacao HOM05D005081 ORTHO05D005506 4.8e-21 105.5 224 38.8
CsaV3_1G032220 Cucumis sativus L. HOM05D005081 ORTHO05D005506 1.1e-20 104.4 261 34.5
TWI32G0620 Tripterygium wilfordii HOM05D005081 ORTHO05D005506 1.1e-20 104.4 230 37.0
MELO3C017390.2 Cucumis melo HOM05D005081 ORTHO05D005506 1.4e-20 104.0 261 34.5
Hma1.2p1_0022F.1_g014783 Hydrangea macrophylla HOM05D005081 ORTHO05D005506 1.4e-20 104.0 243 36.2
AUR62021338 Chenopodium quinoa HOM05D005081 ORTHO05D005506 3.1e-20 102.8 243 35.8
Peaxi162Scf00889g00221 Petunia axillaris HOM05D005081 ORTHO05D005506 3.1e-20 102.8 247 34.4
PGSC0003DMG400013692 Solanum tuberosum HOM05D005081 ORTHO05D005506 3.1e-20 102.8 232 35.8
Eucgr.C02188 Eucalyptus grandis HOM05D005081 ORTHO05D005506 4.1e-20 102.4 256 33.6
FAN07G0684 Fragaria x ananassa HOM05D005081 ORTHO05D005506 5.3e-20 102.1 213 38.5
CSS0043250 Camellia sinensis var. sinensis HOM05D005081 ORTHO05D005506 7.0e-20 101.7 245 35.9
MSTRG.10457 Avicennia marina HOM05D005081 ORTHO05D005506 9.1e-20 101.3 236 35.2
Ciclev10012648m.g Citrus clementina HOM05D005081 ORTHO05D005506 9.1e-20 101.3 220 37.3
RcHm_v2.0_Chr4g0398241 Rosa chinensis HOM05D005081 ORTHO05D005506 9.1e-20 101.3 216 37.0
ClCG06G014000 Citrullus lanatus HOM05D005081 ORTHO05D005506 1.6e-19 100.5 259 33.6
Hma1.2p1_0022F.1_g014780 Hydrangea macrophylla HOM05D005081 ORTHO05D005506 1.6e-19 100.5 214 38.3
Prupe.1G067800 Prunus persica HOM05D005081 ORTHO05D005506 1.6e-19 100.5 212 36.8
TAR383G1035 Trochodendron aralioides HOM05D005081 ORTHO05D005506 4.5e-19 99.0 240 32.9
Lsat_1_v5_gn_7_59220 Lactuca sativa HOM05D005081 ORTHO05D005506 7.7e-19 98.2 239 32.6
Sed0028150 Sechium edule HOM05D005081 ORTHO05D005506 7.7e-19 98.2 223 33.6
Atru.chr12.2077 Acer truncatum HOM05D005081 ORTHO05D005506 1.3e-18 97.4 233 35.2
CiPaw.16G103000 Carya illinoinensis HOM05D005081 ORTHO05D005506 1.3e-18 97.4 216 32.4
Potri.018G132600 Populus trichocarpa HOM05D005081 ORTHO05D005506 1.7e-18 97.1 265 32.8
Cc00_g16170 Coffea canephora HOM05D005081 ORTHO05D005506 2.2e-18 96.7 244 34.4
AUR62033253 Chenopodium quinoa HOM05D005081 ORTHO05D005506 2.9e-18 96.3 239 34.7
TAR625G0352 Trochodendron aralioides HOM05D005081 ORTHO05D005506 2.9e-18 96.3 238 34.0
AT5G35320 Arabidopsis thaliana HOM05D005081 ORTHO05D005506 6.5e-18 95.1 229 35.8
MBI16_g18201_MAGBIO Magnolia biondii HOM05D005081 ORTHO05D005506 6.5e-18 95.1 232 33.6
HanXRQChr03g0067191 Helianthus annuus HOM05D005081 ORTHO05D005506 8.5e-18 94.7 228 33.8
THA.LOC104815319 Tarenaya hassleriana HOM05D005081 ORTHO05D005506 1.1e-17 94.4 225 35.1
SGA_v2.0_scaffold63G21842 Striga asiatica HOM05D005081 ORTHO05D005506 1.5e-17 94.0 242 33.5
Nitab4.5_0000053g0180 Nicotiana tabacum HOM05D005081 ORTHO05D005506 1.9e-17 93.6 232 33.6
Carub.0007s3114 Capsella rubella HOM05D005081 ORTHO05D005506 2.5e-17 93.2 228 37.3
Solyc05g046310.3 Solanum lycopersicum HOM05D005081 ORTHO05D005506 2.5e-17 93.2 240 35.0
Sopen00g006190 Solanum pennellii HOM05D005081 ORTHO05D005506 2.5e-17 93.2 240 35.4
AL7G44130 Arabidopsis lyrata HOM05D005081 ORTHO05D005506 3.2e-17 92.8 226 36.7
A03p44750 Brassica napus HOM05D005081 ORTHO05D005506 4.2e-17 92.4 208 34.1
BraA03t13610Z Brassica rapa HOM05D005081 ORTHO05D005506 4.2e-17 92.4 219 33.8
CANSAT80G2033 Cannabis sativa HOM05D005081 ORTHO05D005506 5.5e-17 92.0 230 34.8
PGR044G2548 Punica granatum HOM05D005081 ORTHO05D005506 7.2e-17 91.7 248 33.9
Sp3g25120 Schrenkiella parvula HOM05D005081 ORTHO05D005506 7.2e-17 91.7 214 34.6
CARHR217350 Cardamine hirsuta HOM05D005081 ORTHO05D005506 9.4e-17 91.3 207 37.2
Nitab4.5_0011475g0010 Nicotiana tabacum HOM05D005081 ORTHO05D005506 1.6e-16 90.5 232 33.6
SalBow6G6882 Salvia bowleyana HOM05D005081 ORTHO05D005506 2.1e-16 90.1 248 32.3
Thhalv10003466m.g Eutrema salsugineum HOM05D005081 ORTHO05D005506 2.7e-16 89.7 226 33.2
PSO170G2950 Papaver somniferum HOM05D005081 ORTHO05D005506 8.0e-16 88.2 247 34.8
THA.LOC104808906 Tarenaya hassleriana HOM05D005081 ORTHO05D005506 1.0e-15 87.8 222 32.4
Hund09052 Selenicereus undatus HOM05D005081 ORTHO05D005506 1.8e-15 87.0 247 32.0
Carub.0003s2733 Capsella rubella HOM05D005081 ORTHO05D005506 2.3e-15 86.7 191 33.5
Dinv02618 Davidia involucrata HOM05D005081 ORTHO05D005506 4.0e-15 85.9 194 38.7
Oeu008926.1 Olea europaea HOM05D005081 ORTHO05D005506 4.0e-15 85.9 238 32.4
Oeu044689.1 Olea europaea HOM05D005081 ORTHO05D005506 6.7e-15 85.1 237 30.8
AL3G43930 Arabidopsis lyrata HOM05D005081 ORTHO05D005506 8.8e-15 84.7 193 35.2
Sabra18G0112300 Salix brachista HOM05D005081 ORTHO05D005506 8.8e-15 84.7 252 31.3
EL10Ac8g18324 Beta vulgaris HOM05D005081 ORTHO05D005506 1.2e-14 84.3 242 32.2
Hund26317 Selenicereus undatus HOM05D005081 ORTHO05D005506 1.2e-14 84.3 245 34.3
THA.LOC104826579 Tarenaya hassleriana HOM05D005081 ORTHO05D005506 1.2e-14 84.3 221 33.9
PSO063G3463 Papaver somniferum HOM05D005081 ORTHO05D005506 1.5e-14 84.0 248 34.7
Sed0020945 Sechium edule HOM05D005081 ORTHO05D005506 1.5e-14 84.0 228 31.6
MSTRG.26528 Avicennia marina HOM05D005081 ORTHO05D005506 2.6e-14 83.2 228 31.1
HanXRQChr10g0303491 Helianthus annuus HOM05D005081 ORTHO05D005506 2.6e-14 83.2 235 31.9
Aqoxy7G02679 Aquilegia oxysepala HOM05D005081 ORTHO05D005506 9.7e-14 81.3 230 33.9
Ah.14g083630 Amaranthus hybridus HOM05D005081 ORTHO05D005506 1.3e-13 80.9 237 30.8
Ah.09g230120 Amaranthus hybridus HOM05D005081 ORTHO05D005506 3.7e-13 79.3 259 30.1
BcaB08g34509 Brassica carinata HOM05D005081 ORTHO05D005506 4.8e-13 79.0 208 34.1
unitig_899.g15188 Utricularia gibba HOM05D005081 ORTHO05D005506 8.2e-13 78.2 246 30.9
CARHR103910 Cardamine hirsuta HOM05D005081 ORTHO05D005506 1.8e-12 77.0 198 31.3
Sc08g0004640 Simmondsia chinensis HOM05D005081 ORTHO05D005506 3.1e-12 76.3 240 32.5
HPP92_017106 Vanilla planifolia HOM05D005081 ORTHO05D005506 7.0e-12 75.1 223 30.9
Aa31LG4G14880 Aethionema arabicum HOM05D005081 ORTHO05D005506 9.1e-12 74.7 225 33.3
MBI13_g31561_MAGBIO Magnolia biondii HOM05D005081 ORTHO05D005506 1.2e-11 74.3 231 30.7
HPP92_017096 Vanilla planifolia HOM05D005081 ORTHO05D005506 1.2e-11 74.3 223 30.9
ECA234G2314 Erigeron canadensis HOM05D005081 ORTHO05D005506 1.6e-11 73.9 212 32.1
Actinidia31880 Actinidia chinensis HOM05D005081 ORTHO05D005506 2.0e-11 73.6 221 32.1
CDE02G3184 Ceratophyllum demersum HOM05D005081 ORTHO05D005506 1.5e-09 67.4 178 29.2
BcaC01g03146 Brassica carinata HOM05D005081 ORTHO05D005506 1.9e-09 67.0 212 33.0
C03p55600 Brassica napus HOM05D005081 ORTHO05D005506 1.9e-09 67.0 212 33.0
BolC3t17837H Brassica oleracea HOM05D005081 ORTHO05D005506 1.9e-09 67.0 212 33.0
Lalb_Chr11g0064261 Lupinus albus HOM05D005081 ORTHO05D005506 1.9e-09 67.0 222 29.7
ATR0626G171 Amborella trichopoda HOM05D005081 ORTHO05D005506 2.5e-09 66.6 246 33.3
Zm00001eb208100 Zea mays HOM05D005081 ORTHO05D005506 2.5e-09 66.6 223 28.7
DCAR_019825 Daucus carota HOM05D005081 ORTHO05D005506 7.2e-09 65.1 229 33.2
Os02g0141500 Oryza sativa ssp. japonica HOM05D005081 ORTHO05D005506 3.6e-08 62.8 225 26.2
Thecc.09G002900 Theobroma cacao HOM05D005081 ORTHO05D005506 1.0e-07 61.2 234 27.8
FAN20G0355 Fragaria x ananassa HOM05D026897 ORTHO05D005506 1.4e-07 60.8 175 30.3
Peaxi162Scf00566g00025 Petunia axillaris HOM05D005081 ORTHO05D005506 3.0e-07 59.7 124 33.9
Peaxi162Scf00083g00112 Petunia axillaris HOM05D005081 ORTHO05D005506 4.0e-07 59.3 124 34.7
MD16G1241100 Malus domestica HOM05D005081 ORTHO05D005506 5.2e-07 58.9 94 41.5
RcHm_v2.0_Chr6g0305451 Rosa chinensis HOM05D005081 ORTHO05D005506 8.8e-07 58.2 167 28.7
Peaxi162Scf00460g00005 Petunia axillaris HOM05D005081 ORTHO05D005506 1.2e-06 57.8 123 31.7
FAN15G2850 Fragaria x ananassa HOM05D026897 ORTHO05D005506 2.0e-06 57.0 165 30.9
Peaxi162Scf00740g00003 Petunia axillaris HOM05D005081 ORTHO05D005506 2.6e-06 56.6 97 34.0
Peaxi162Scf01260g00001 Petunia axillaris HOM05D005081 ORTHO05D005506 2.6e-06 56.6 128 31.2
Peaxi162Scf00020g00002 Petunia axillaris HOM05D005081 ORTHO05D005506 7.5e-06 55.1 119 31.1
Peaxi162Scf00228g00099 Petunia axillaris HOM05D005081 ORTHO05D005506 9.8e-06 54.7 125 31.2


User provided reference genes

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