Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G300700 Phaseolus vulgaris HOM05D005777 ORTHO05D006854 0.0e+00 1080.5 551 100.0
Glyma.08G025000 Glycine max HOM05D005777 ORTHO05D006854 3.0e-219 765.4 555 72.4
Glyma.05G218900 Glycine max HOM05D005777 ORTHO05D006854 1.7e-217 759.6 555 71.5
VMungo0251G0419 Vigna mungo HOM05D003100 ORTHO05D003533 1.9e-213 746.1 606 68.6
Lj4g0026879 Lotus japonicus HOM05D005777 ORTHO05D006854 9.9e-162 574.3 576 55.9
Psat7g024000 Pisum sativum HOM05D005777 ORTHO05D006854 3.1e-147 526.2 502 56.2
Medtr8g099725 Medicago truncatula HOM05D005777 ORTHO05D006854 2.1e-140 503.4 546 52.0
Lalb_Chr05g0223951 Lupinus albus HOM05D005777 ORTHO05D006854 1.1e-125 454.5 415 59.3
Ca_17460_v3 Cicer arietinum L. HOM05D005777 ORTHO05D006854 3.9e-118 429.5 621 45.7
TPR.G3378 Trifolium pratense HOM05D005777 ORTHO05D006854 1.5e-109 401.0 447 51.9
TWI60G0567 Tripterygium wilfordii HOM05D005777 ORTHO05D006854 1.7e-100 370.9 471 45.4
Atru.chr9.1942 Acer truncatum HOM05D005777 ORTHO05D006854 1.3e-92 344.7 590 39.3
PGR042G2859 Punica granatum HOM05D005777 ORTHO05D006854 3.8e-89 333.2 570 40.9
RcHm_v2.0_Chr7g0186161 Rosa chinensis HOM05D005777 ORTHO05D006854 5.0e-89 332.8 385 49.1
CANSAT21G0853 Cannabis sativa HOM05D005777 ORTHO05D006854 8.6e-89 332.0 467 42.6
FAN04G0792 Fragaria x ananassa HOM05D005777 ORTHO05D006854 5.5e-88 329.3 384 49.2
FAN13G2465 Fragaria x ananassa HOM05D005777 ORTHO05D006854 7.2e-88 328.9 519 40.7
Prupe.5G124500 Prunus persica HOM05D005777 ORTHO05D006854 2.1e-87 327.4 666 35.4
FvH4_5g11630 Fragaria vesca HOM05D005777 ORTHO05D006854 1.4e-86 324.7 380 49.2
Cfa011969 Carpinus fangiana HOM05D005777 ORTHO05D006854 7.5e-85 318.9 385 49.1
Cpa.g.sc79.3 Carica papaya HOM05D005777 ORTHO05D006854 1.7e-84 317.8 566 38.3
Nitab4.5_0002367g0090 Nicotiana tabacum HOM05D005777 ORTHO05D006854 4.5e-82 309.7 369 47.2
Nitab4.5_0002793g0030 Nicotiana tabacum HOM05D005777 ORTHO05D006854 2.5e-80 303.9 382 45.5
CsaV3_5G001940 Cucumis sativus L. HOM05D005777 ORTHO05D006854 7.3e-80 302.4 587 37.1
Eucgr.E00747 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.1e-79 300.8 472 39.4
MD06G1111700 Malus domestica HOM05D005777 ORTHO05D006854 3.6e-79 300.1 591 35.5
CSS0003604 Camellia sinensis var. sinensis HOM05D005777 ORTHO05D006854 1.0e-78 298.5 372 44.9
Sed0007946 Sechium edule HOM05D005777 ORTHO05D006854 1.4e-78 298.1 576 37.5
Eucgr.E00744 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.0e-78 296.6 473 39.5
Haze_09107 Corylus avellana HOM05D005777 ORTHO05D006854 5.2e-78 296.2 516 39.3
QL02p029612 Quercus lobata HOM05D005777 ORTHO05D006854 6.8e-78 295.8 381 45.1
Potri.007G058050 Populus trichocarpa HOM05D005777 ORTHO05D006854 2.0e-77 294.3 460 42.0
Eucgr.E00956 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.6e-77 293.9 469 39.7
Peaxi162Scf00074g00526 Petunia axillaris HOM05D005777 ORTHO05D006854 1.4e-75 288.1 354 46.0
MELO3C033830.2 Cucumis melo HOM05D005777 ORTHO05D006854 5.4e-75 286.2 462 40.3
Lj8C204T6 Lonicera japonica HOM05D005777 ORTHO05D006854 5.4e-75 286.2 387 41.6
Sabra07G0049700 Salix brachista HOM05D005777 ORTHO05D006854 9.2e-75 285.4 440 41.4
CAN.G567.32 Capsicum annuum HOM05D005777 ORTHO05D006854 1.3e-73 281.6 367 45.2
Sopen08g030950 Solanum pennellii HOM05D005777 ORTHO05D006854 1.1e-72 278.5 447 40.5
vmacro13879 Vaccinium macrocarpon HOM05D005777 ORTHO05D006854 4.3e-72 276.6 437 38.0
Solyc08g082720.4 Solanum lycopersicum HOM05D005777 ORTHO05D006854 9.5e-72 275.4 444 40.8
Thecc.08G166000 Theobroma cacao HOM05D005777 ORTHO05D006854 5.2e-70 269.6 397 40.6
Rhsim07G0080700 Rhododendron simsii HOM05D005777 ORTHO05D006854 1.2e-69 268.5 453 38.2
PGSC0003DMG400012134 Solanum tuberosum HOM05D005777 ORTHO05D006854 9.8e-69 265.4 352 44.0
Lsat_1_v5_gn_6_83361 Lactuca sativa HOM05D005777 ORTHO05D006854 2.0e-66 257.7 439 37.8
FAN18G2480 Fragaria x ananassa HOM05D005777 ORTHO05D006854 6.0e-66 256.1 343 41.7
TAR629G1222 Trochodendron aralioides HOM05D005777 ORTHO05D006854 1.0e-65 255.4 388 40.7
HanXRQChr03g0083721 Helianthus annuus HOM05D005777 ORTHO05D006854 2.3e-65 254.2 359 41.2
ECA240G0322 Erigeron canadensis HOM05D005777 ORTHO05D006854 5.0e-65 253.1 452 37.6
CiPaw.11G117200 Carya illinoinensis HOM05D005777 ORTHO05D006854 1.9e-64 251.1 295 49.2
MBI07_g24771_MAGBIO Magnolia biondii HOM05D005777 ORTHO05D006854 6.8e-62 242.7 466 36.3
Manes.01G049500 Manihot esculenta HOM05D005777 ORTHO05D006854 1.2e-61 241.9 251 54.2
Nn1g00296 Nelumbo nucifera HOM05D005777 ORTHO05D006854 8.3e-60 235.7 466 36.5
Oeu055021.1 Olea europaea HOM05D005777 ORTHO05D006854 1.1e-59 235.3 246 51.2
Aqoxy5G04312 Aquilegia oxysepala HOM05D005777 ORTHO05D006854 2.4e-59 234.2 423 36.9
Migut.E01651 Erythranthe guttata HOM05D005777 ORTHO05D006854 8.6e-57 225.7 239 49.0
Ah.12g052840 Amaranthus hybridus HOM05D005777 ORTHO05D006854 1.9e-56 224.6 311 42.4
Cc08_g16390 Coffea canephora HOM05D005777 ORTHO05D006854 7.3e-56 222.6 288 45.1
Migut.E00735 Erythranthe guttata HOM05D005777 ORTHO05D006854 1.4e-54 218.4 248 47.2
EL10Ac5g12951 Beta vulgaris HOM05D005777 ORTHO05D006854 6.8e-54 216.1 246 48.4
PSO170G4328 Papaver somniferum HOM05D005777 ORTHO05D006854 6.8e-54 216.1 390 34.1
Sc01g0010430 Simmondsia chinensis HOM05D005777 ORTHO05D006854 3.8e-52 210.3 244 49.2
Actinidia22740 Actinidia chinensis HOM05D005777 ORTHO05D006854 3.5e-50 203.8 411 35.5
Eucgr.E00752 Eucalyptus grandis HOM05D005777 ORTHO05D006854 7.8e-50 202.6 493 32.5
Hund14203 Selenicereus undatus HOM05D005777 ORTHO05D006854 1.7e-49 201.4 279 43.4
FAN08G0729 Fragaria x ananassa HOM05D005777 ORTHO05D006854 6.6e-49 199.5 309 37.5
DCAR_006511 Daucus carota HOM05D005777 ORTHO05D006854 1.5e-48 198.4 436 33.9
Eucgr.E00762 Eucalyptus grandis HOM05D005777 ORTHO05D006854 9.6e-48 195.7 285 40.4
Eucgr.E00939 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.3e-44 185.3 199 51.3
Gorai.005G117300 Gossypium raimondii HOM05D005777 ORTHO05D006854 9.3e-43 179.1 229 45.9
FAN18G2579 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.0e-41 175.6 279 37.3
Gohir.A02G088000 Gossypium hirsutum HOM05D005777 ORTHO05D006854 1.3e-41 175.3 229 45.4
AUR62019875 Chenopodium quinoa HOM05D005777 ORTHO05D006854 5.6e-40 169.9 208 47.6
Duzib116G0305 Durio zibethinus HOM05D005777 ORTHO05D006854 9.6e-40 169.1 199 46.2
Ciclev10023874m.g Citrus clementina HOM05D005777 ORTHO05D006854 3.8e-36 157.1 155 54.8
HPP92_024143 Vanilla planifolia HOM05D005777 ORTHO05D006854 4.6e-34 150.2 224 39.3
SGA_v2.0_scaffold74G24601 Striga asiatica HOM05D005777 ORTHO05D006854 1.0e-33 149.1 250 38.4
ATR0602G092 Amborella trichopoda HOM05D005777 ORTHO05D006854 6.7e-33 146.4 238 38.2
Dinv37498 Davidia involucrata HOM05D005777 ORTHO05D006854 8.7e-33 146.0 141 53.2
COL.COLO4_25066 Corchorus olitorius HOM05D000316 ORTHO05D006854 1.8e-30 138.3 411 29.7
Ciclev10023944m.g Citrus clementina HOM05D005777 ORTHO05D006854 9.9e-29 132.5 192 38.5
Eucgr.E00749 Eucalyptus grandis HOM05D005777 ORTHO05D006854 9.9e-29 132.5 162 45.7
Eucgr.E00969 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.7e-28 131.7 161 46.0
THA.LOC104813047 Tarenaya hassleriana HOM05D005777 ORTHO05D006854 4.9e-28 130.2 151 52.3
Eucgr.E01013 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.9e-27 128.3 161 45.3
Thhalv10028849m.g Eutrema salsugineum HOM05D005777 ORTHO05D006854 5.5e-27 126.7 147 49.7
GSVIVG01019597001 Vitis vinifera HOM05D005777 ORTHO05D006854 5.5e-27 126.7 106 57.5
Eucgr.E00900 Eucalyptus grandis HOM05D005777 ORTHO05D006854 7.1e-27 126.3 161 46.6
Lsat_1_v5_gn_5_82800 Lactuca sativa HOM05D005777 ORTHO05D006854 7.1e-27 126.3 194 38.7
FAN04G0565 Fragaria x ananassa HOM05D005777 ORTHO05D006854 2.1e-26 124.8 104 58.7
Os09g0363400 Oryza sativa ssp. japonica HOM05D005777 ORTHO05D006854 2.1e-26 124.8 225 33.8
Eucgr.E00726 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.0e-25 120.9 137 50.4
Carub.0006s2962 Capsella rubella HOM05D005777 ORTHO05D006854 3.9e-25 120.6 148 48.6
AUR62007011 Chenopodium quinoa HOM05D005777 ORTHO05D006854 2.5e-24 117.9 262 36.3
Sp6g06640 Schrenkiella parvula HOM05D005777 ORTHO05D006854 5.6e-24 116.7 149 48.3
CARHR255730 Cardamine hirsuta HOM05D005777 ORTHO05D006854 9.6e-24 115.9 149 49.7
Lsat_1_v5_gn_9_112141 Lactuca sativa HOM05D005777 ORTHO05D006854 1.6e-23 115.2 106 52.8
Eucgr.E00912 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.1e-23 114.8 110 51.8
AL6G44960 Arabidopsis lyrata HOM05D005777 ORTHO05D006854 1.4e-22 112.1 148 46.6
Eucgr.E00696 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.4e-22 112.1 137 44.5
AT4G10890 Arabidopsis thaliana HOM05D005777 ORTHO05D006854 6.9e-22 109.8 147 46.9
BcaB01g01556 Brassica carinata HOM05D005777 ORTHO05D006854 1.5e-21 108.6 147 46.3
CDE03G0022 Ceratophyllum demersum HOM05D002476 ORTHO05D002652 1.3e-20 105.5 227 31.7
Eucgr.E00895 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.2e-20 104.8 98 48.0
Eucgr.E00894 Eucalyptus grandis HOM05D005777 ORTHO05D006854 6.5e-20 103.2 73 60.3
BraA09t38398Z Brassica rapa HOM05D005777 ORTHO05D006854 1.1e-19 102.4 140 45.7
C09p35860 Brassica napus HOM05D005777 ORTHO05D006854 5.5e-19 100.1 142 42.3
Aa31LG9G11240 Aethionema arabicum HOM05D005777 ORTHO05D006854 7.1e-19 99.8 84 59.5
Actinidia27306 Actinidia chinensis HOM05D005777 ORTHO05D006854 9.3e-19 99.4 70 64.3
BcaC04g21086 Brassica carinata HOM05D005777 ORTHO05D006854 9.3e-19 99.4 142 43.0
A09p28290 Brassica napus HOM05D005777 ORTHO05D006854 3.5e-18 97.4 144 43.8
BolC9t56419H Brassica oleracea HOM05D005777 ORTHO05D006854 6.0e-18 96.7 142 41.5
Eucgr.H03743 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.8e-17 95.1 77 61.0
Lalb_Chr05g0223961 Lupinus albus HOM05D005777 ORTHO05D006854 1.5e-16 92.0 143 46.2
Eucgr.E00686 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.9e-16 91.7 95 47.4
SHI06955 Sapria himalayana HOM05D005777 ORTHO05D006854 2.4e-14 84.7 91 50.5
Gohir.D02G103200 Gossypium hirsutum HOM05D005777 ORTHO05D006854 1.4e-11 75.5 171 32.2
AagrBONN_evm.TU.Sc2ySwM_368.2767 Anthoceros agrestis HOM05D005777 ORTHO05D006854 1.0e-09 69.3 77 48.1
Hma1.2p1_0338F.1_g129700 Hydrangea macrophylla HOM05D005777 ORTHO05D006854 1.5e-08 65.5 52 65.4
Eucgr.H03760 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.3e-07 62.4 53 62.3
QL08p034398 Quercus lobata HOM05D000176 ORTHO05D000106 1.3e-07 62.4 64 46.9
FAN18G0036 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.7e-07 62.0 35 77.1
QL06p042986 Quercus lobata HOM05D000529 ORTHO05D000472 2.2e-07 61.6 55 50.9


User provided reference genes

Program Settings