Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G298200 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 8.6e-67 256.9 135 100.0
Phvul.002G298600 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 9.8e-63 243.4 135 97.8
Glyma.08G023200 Glycine max HOM05D007727 ORTHO05D009078 6.2e-41 171.0 126 72.2
Glyma.05G217200 Glycine max HOM05D007727 ORTHO05D009078 9.9e-39 163.7 127 70.9
Glyma.08G022800 Glycine max HOM05D007727 ORTHO05D009078 9.9e-39 163.7 135 67.4
VMungo0251G2989 Vigna mungo HOM05D007727 ORTHO05D009078 1.7e-38 162.9 130 72.3
Glyma.05G216900 Glycine max HOM05D007727 ORTHO05D009078 4.1e-37 158.3 135 65.2
Medtr8g099485 Medicago truncatula HOM05D007727 ORTHO05D009078 3.3e-26 122.1 129 59.7
TPR.G11121 Trifolium pratense HOM05D007727 ORTHO05D009078 9.6e-26 120.6 134 54.5
Lj4g0015473 Lotus japonicus HOM05D007727 ORTHO05D009078 2.8e-25 119.0 139 51.1
TPR.G3394 Trifolium pratense HOM05D007727 ORTHO05D009078 8.1e-25 117.5 128 57.0
Lalb_Chr05g0224131 Lupinus albus HOM05D007727 ORTHO05D009078 1.8e-24 116.3 126 53.2
TPR.G3415 Trifolium pratense HOM05D007727 ORTHO05D009078 1.1e-21 107.1 125 54.4
TPR.G3425 Trifolium pratense HOM05D007727 ORTHO05D009078 1.4e-21 106.7 130 51.5
Glyma.01G225500 Glycine max HOM05D007727 ORTHO05D009078 4.6e-20 101.7 133 46.6
Lj4g0008549 Lotus japonicus HOM05D007727 ORTHO05D009078 7.9e-20 100.9 135 48.1
Glyma.11G017500 Glycine max HOM05D007727 ORTHO05D009078 3.0e-19 99.0 135 47.4
Phvul.002G164400 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 3.9e-19 98.6 131 47.3
LjContig00312_ERROPOS870357g0016151 Lotus japonicus HOM05D007727 ORTHO05D009078 8.7e-19 97.4 130 45.4
VMungo1215G2373 Vigna mungo HOM05D007727 ORTHO05D009078 1.1e-18 97.1 133 46.6
Medtr8g099475 Medicago truncatula HOM05D007727 ORTHO05D009078 1.8e-16 89.7 121 52.9
Dinv38830 Davidia involucrata HOM05D007727 ORTHO05D009078 1.5e-15 86.7 131 43.5
Hma1.2p1_1746F.1_g300420 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 3.5e-12 75.5 131 38.9
Haze_09064 Corylus avellana HOM05D007727 ORTHO05D009078 1.0e-11 73.9 102 44.1
Potri.001G091400 Populus trichocarpa HOM05D007727 ORTHO05D009078 2.3e-11 72.8 129 38.0
Psat2g185360 Pisum sativum HOM05D007727 ORTHO05D009078 3.0e-11 72.4 143 42.0
CSS0050195 Camellia sinensis var. sinensis HOM05D007727 ORTHO05D009078 5.1e-11 71.6 103 46.6
TPR.G25603 Trifolium pratense HOM05D007727 ORTHO05D009078 1.5e-10 70.1 143 39.9
Cfa012009 Carpinus fangiana HOM05D007727 ORTHO05D009078 1.9e-10 69.7 115 40.9
Manes.02G009800 Manihot esculenta HOM05D007727 ORTHO05D009078 1.9e-10 69.7 100 43.0
Medtr5g009290 Medicago truncatula HOM05D007727 ORTHO05D009078 1.9e-10 69.7 144 41.0
Potri.003G140200 Populus trichocarpa HOM05D007727 ORTHO05D009078 2.5e-10 69.3 100 43.0
Potri.003G140233 Populus trichocarpa HOM05D007727 ORTHO05D009078 2.5e-10 69.3 100 43.0
Potri.003G140266 Populus trichocarpa HOM05D007727 ORTHO05D009078 2.5e-10 69.3 100 43.0
Potri.004G151000 Populus trichocarpa HOM05D007727 ORTHO05D009078 2.5e-10 69.3 100 43.0
QL02p030408 Quercus lobata HOM05D007727 ORTHO05D009078 7.4e-10 67.8 135 36.3
CSS0019090 Camellia sinensis var. sinensis HOM05D007727 ORTHO05D009078 9.6e-10 67.4 130 36.9
QL02p030384 Quercus lobata HOM05D007727 ORTHO05D009078 9.6e-10 67.4 108 39.8
QL02p030389 Quercus lobata HOM05D007727 ORTHO05D009078 9.6e-10 67.4 113 37.2
Haze_09065 Corylus avellana HOM05D007727 ORTHO05D009078 1.6e-09 66.6 102 39.2
CiPaw.12G082800 Carya illinoinensis HOM05D007727 ORTHO05D009078 2.1e-09 66.2 108 38.9
Rhsim02G0243900 Rhododendron simsii HOM05D007727 ORTHO05D009078 2.1e-09 66.2 113 41.6
MSTRG.25675 Avicennia marina HOM05D007727 ORTHO05D009078 2.8e-09 65.9 105 44.8
Hma1.2p1_1461F.1_g285070 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 2.8e-09 65.9 134 36.6
Rhsim02G0243800 Rhododendron simsii HOM05D007727 ORTHO05D009078 4.8e-09 65.1 94 44.7
Sabra01G0067800 Salix brachista HOM05D007727 ORTHO05D009078 4.8e-09 65.1 100 38.0
ClCG07G011610 Citrullus lanatus HOM05D007727 ORTHO05D009078 6.2e-09 64.7 98 43.9
MELO3C016295.2 Cucumis melo HOM05D007727 ORTHO05D009078 6.2e-09 64.7 139 35.3
QL02p030393 Quercus lobata HOM05D007727 ORTHO05D009078 6.2e-09 64.7 112 40.2
Cfa012003 Carpinus fangiana HOM05D007727 ORTHO05D009078 8.2e-09 64.3 103 41.7
Cfa012008 Carpinus fangiana HOM05D007727 ORTHO05D009078 8.2e-09 64.3 103 41.7
CsaV3_4G006600 Cucumis sativus L. HOM05D007727 ORTHO05D009078 1.1e-08 63.9 110 38.2
Rhsim02G0243700 Rhododendron simsii HOM05D007727 ORTHO05D009078 1.4e-08 63.5 114 40.4
CANSAT21G1217 Cannabis sativa HOM05D007727 ORTHO05D009078 4.0e-08 62.0 59 50.8
Sabra01G0067700 Salix brachista HOM05D007727 ORTHO05D009078 4.0e-08 62.0 100 36.0
Rhsim02G0244000 Rhododendron simsii HOM05D007727 ORTHO05D009078 5.3e-08 61.6 113 38.9
Rhsim02G0243600 Rhododendron simsii HOM05D007727 ORTHO05D009078 6.9e-08 61.2 95 45.3
Sed0000706 Sechium edule HOM05D007727 ORTHO05D009078 6.9e-08 61.2 120 37.5
CiPaw.12G082600 Carya illinoinensis HOM05D007727 ORTHO05D009078 9.0e-08 60.8 119 37.0
Hma1.2p1_1461F.1_g285060 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 9.0e-08 60.8 58 51.7
Hma1.2p1_2808F.1_g328866 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 9.0e-08 60.8 58 51.7
Oeu031672.1 Olea europaea HOM05D007727 ORTHO05D009078 1.2e-07 60.5 121 41.3
FvH4_5g04620 Fragaria vesca HOM05D007727 ORTHO05D009078 2.6e-07 59.3 133 32.3
FAN18G4426 Fragaria x ananassa HOM05D007727 ORTHO05D009078 2.6e-07 59.3 133 32.3
FAN04G2059 Fragaria x ananassa HOM05D007727 ORTHO05D009078 7.6e-07 57.8 133 31.6
FAN18G0179 Fragaria x ananassa HOM05D007727 ORTHO05D009078 7.6e-07 57.8 133 32.3
COL.COLO4_10705 Corchorus olitorius HOM05D007727 ORTHO05D009078 1.0e-06 57.4 110 36.4
Ciclev10022327m.g Citrus clementina HOM05D007727 ORTHO05D009078 1.3e-06 57.0 144 31.9
FAN08G2749 Fragaria x ananassa HOM05D007727 ORTHO05D009078 1.3e-06 57.0 133 31.6
Oeu031673.1 Olea europaea HOM05D007727 ORTHO05D009078 1.3e-06 57.0 104 42.3
CiPaw.11G121100 Carya illinoinensis HOM05D007727 ORTHO05D009078 2.9e-06 55.8 104 35.6
Gorai.004G133300 Gossypium raimondii HOM05D007727 ORTHO05D009078 3.8e-06 55.5 137 32.8
AUR62019842 Chenopodium quinoa HOM05D007727 ORTHO05D009078 4.9e-06 55.1 48 50.0
FAN13G2104 Fragaria x ananassa HOM05D007727 ORTHO05D009078 4.9e-06 55.1 108 35.2
FAN13G3265 Fragaria x ananassa HOM05D007727 ORTHO05D009078 4.9e-06 55.1 108 35.2
Gohir.A08G103450 Gossypium hirsutum HOM05D007727 ORTHO05D009078 4.9e-06 55.1 137 33.6
Eucgr.D01742 Eucalyptus grandis HOM05D007727 ORTHO05D009078 8.4e-06 54.3 46 50.0
Gohir.D03G083800 Gossypium hirsutum HOM05D007727 ORTHO05D009078 8.4e-06 54.3 46 50.0
Gohir.D08G130400 Gossypium hirsutum HOM05D007727 ORTHO05D009078 8.4e-06 54.3 117 35.0
Gorai.003G078900 Gossypium raimondii HOM05D007727 ORTHO05D009078 8.4e-06 54.3 46 50.0
Sed0007502 Sechium edule HOM05D007727 ORTHO05D009078 8.4e-06 54.3 96 37.5
PGSC0003DMG400012144 Solanum tuberosum HOM05D011491 ORTHO05D009078 8.4e-06 54.3 127 33.9


User provided reference genes

Program Settings