Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G297500 Phaseolus vulgaris HOM05D007275 ORTHO05D009279 1.2e-46 189.5 96 100.0
Hma1.2p1_0359F.1_g135280 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 3.2e-39 164.9 94 88.3
Glyma.05G216300 Glycine max HOM05D007275 ORTHO05D009279 1.6e-38 162.5 92 88.0
arahy.Tifrunner.gnm1.ann1.GQP3LI Arachis hypogaea HOM05D007275 ORTHO05D009279 2.0e-38 162.2 94 84.0
Glyma.08G022200 Glycine max HOM05D007275 ORTHO05D009279 2.7e-38 161.8 92 87.0
arahy.Tifrunner.gnm1.ann1.IALD8X Arachis hypogaea HOM05D007275 ORTHO05D009279 4.5e-38 161.0 94 83.0
QL02p030913 Quercus lobata HOM05D007275 ORTHO05D009279 4.5e-38 161.0 94 84.0
Dinv38844 Davidia involucrata HOM05D007275 ORTHO05D009279 1.0e-37 159.8 96 83.3
GSVIVG01019513001 Vitis vinifera HOM05D007275 ORTHO05D009279 2.3e-37 158.7 96 82.3
Cfa012796 Carpinus fangiana HOM05D007275 ORTHO05D009279 1.5e-36 156.0 97 83.5
Ciclev10024283m.g Citrus clementina HOM05D007275 ORTHO05D009279 3.3e-36 154.8 94 81.9
Gohir.D12G236900 Gossypium hirsutum HOM05D007275 ORTHO05D009279 4.3e-36 154.5 96 80.2
Gorai.008G253500 Gossypium raimondii HOM05D007275 ORTHO05D009279 4.3e-36 154.5 96 80.2
Actinidia22145 Actinidia chinensis HOM05D007275 ORTHO05D009279 5.6e-36 154.1 96 81.2
Lj4g0015273 Lotus japonicus HOM05D007275 ORTHO05D009279 5.6e-36 154.1 92 83.7
Nn1g01839 Nelumbo nucifera HOM05D007275 ORTHO05D009279 5.6e-36 154.1 96 80.2
Potri.001G092700 Populus trichocarpa HOM05D007275 ORTHO05D009279 7.3e-36 153.7 94 81.9
Gohir.A12G235700 Gossypium hirsutum HOM05D007275 ORTHO05D009279 9.5e-36 153.3 96 79.2
Prupe.5G117300 Prunus persica HOM05D007275 ORTHO05D009279 1.6e-35 152.5 96 80.2
CSS0010422 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 2.1e-35 152.1 94 79.8
Thecc.03G296000 Theobroma cacao HOM05D007275 ORTHO05D009279 2.8e-35 151.8 96 80.2
Lalb_Chr16g0390621 Lupinus albus HOM05D007275 ORTHO05D009279 6.1e-35 150.6 93 78.5
AUR62010827 Chenopodium quinoa HOM05D007275 ORTHO05D009279 8.0e-35 150.2 96 79.2
TAR375G1117 Trochodendron aralioides HOM05D007275 ORTHO05D009279 8.0e-35 150.2 94 80.9
Sabra01G0069000 Salix brachista HOM05D007275 ORTHO05D009279 1.0e-34 149.8 94 79.8
Haze_08628 Corylus avellana HOM05D007275 ORTHO05D009279 1.4e-34 149.4 97 79.4
Nn3g19047 Nelumbo nucifera HOM05D007275 ORTHO05D009279 1.4e-34 149.4 96 77.1
Eucgr.D01727 Eucalyptus grandis HOM05D007275 ORTHO05D009279 1.8e-34 149.1 96 77.1
Gohir.D11G024100 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.8e-34 149.1 94 77.7
Gorai.007G025800 Gossypium raimondii HOM05D007275 ORTHO05D009279 1.8e-34 149.1 94 77.7
Manes.02G011100 Manihot esculenta HOM05D007275 ORTHO05D009279 1.8e-34 149.1 97 80.4
Gohir.A11G024400 Gossypium hirsutum HOM05D007275 ORTHO05D009279 3.1e-34 148.3 94 77.7
CSS0024458 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 4.0e-34 147.9 94 79.8
MD06G1104700 Malus domestica HOM05D007275 ORTHO05D009279 5.2e-34 147.5 96 76.0
TPR.G3422 Trifolium pratense HOM05D007275 ORTHO05D009279 5.2e-34 147.5 96 75.0
Cc08_g15930 Coffea canephora HOM05D007275 ORTHO05D009279 6.8e-34 147.1 96 78.1
Hma1.2p1_0229F.1_g097175 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 8.9e-34 146.7 97 77.3
Hma1.2p1_0229F.1_g097200 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 8.9e-34 146.7 97 77.3
COL.COLO4_10681 Corchorus olitorius HOM05D007275 ORTHO05D009279 1.2e-33 146.4 96 76.0
Sabra03G0100000 Salix brachista HOM05D007275 ORTHO05D009279 2.0e-33 145.6 93 76.3
MD14G1123400 Malus domestica HOM05D007275 ORTHO05D009279 2.6e-33 145.2 96 76.0
Potri.003G138800 Populus trichocarpa HOM05D007275 ORTHO05D009279 2.6e-33 145.2 93 76.3
Sc01g0010220 Simmondsia chinensis HOM05D007275 ORTHO05D009279 2.6e-33 145.2 96 76.0
Nitab4.5_0000726g0090 Nicotiana tabacum HOM05D007275 ORTHO05D009279 3.4e-33 144.8 93 77.4
CAN.G532.107 Capsicum annuum HOM05D007275 ORTHO05D009279 9.8e-33 143.3 96 74.0
Peaxi162Scf00117g01123 Petunia axillaris HOM05D007275 ORTHO05D009279 9.8e-33 143.3 96 77.1
Atru.chr9.2015 Acer truncatum HOM05D007275 ORTHO05D009279 1.7e-32 142.5 97 75.3
CiPaw.12G084200 Carya illinoinensis HOM05D007275 ORTHO05D009279 2.9e-32 141.7 96 75.0
PGSC0003DMG400012158 Solanum tuberosum HOM05D007275 ORTHO05D009279 2.9e-32 141.7 96 72.9
Peaxi162Scf00074g01033 Petunia axillaris HOM05D007275 ORTHO05D009279 3.7e-32 141.4 94 75.5
EL10Ac5g12903 Beta vulgaris HOM05D007275 ORTHO05D009279 4.9e-32 141.0 96 72.9
RcHm_v2.0_Chr7g0195121 Rosa chinensis HOM05D007275 ORTHO05D009279 4.9e-32 141.0 96 72.9
Oeu038573.1 Olea europaea HOM05D007275 ORTHO05D009279 1.1e-31 139.8 96 72.9
Nitab4.5_0010144g0020 Nicotiana tabacum HOM05D007275 ORTHO05D009279 1.4e-31 139.4 96 74.0
PGR031G2423 Punica granatum HOM05D007275 ORTHO05D009279 1.4e-31 139.4 96 71.9
MBI06_g46619_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D009279 1.9e-31 139.0 94 73.4
MBI06_g46730_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D000022 1.9e-31 139.0 94 73.4
TAR629G0721 Trochodendron aralioides HOM05D007275 ORTHO05D010861 1.9e-31 139.0 97 74.2
Medtr8g099385 Medicago truncatula HOM05D007275 ORTHO05D009279 2.4e-31 138.7 95 72.6
Solyc08g082160.3 Solanum lycopersicum HOM05D007275 ORTHO05D009279 4.1e-31 137.9 96 72.9
Sopen08g030440 Solanum pennellii HOM05D007275 ORTHO05D009279 4.1e-31 137.9 96 72.9
CANSAT21G2355 Cannabis sativa HOM05D007275 ORTHO05D009279 5.4e-31 137.5 96 76.0
DCAR_005035 Daucus carota HOM05D007275 ORTHO05D009279 7.0e-31 137.1 97 73.2
Dinv37542 Davidia involucrata HOM05D007275 ORTHO05D009279 7.0e-31 137.1 84 82.1
FvH4_3g01740 Fragaria vesca HOM05D007275 ORTHO05D009279 1.6e-30 136.0 97 69.1
FvH4_5g04420 Fragaria vesca HOM05D007275 ORTHO05D009279 1.6e-30 136.0 97 70.1
FAN18G1142 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.6e-30 136.0 97 70.1
FAN18G2266 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.6e-30 136.0 97 70.1
SalBow1G0766 Salvia bowleyana HOM05D007275 ORTHO05D009279 2.0e-30 135.6 96 69.8
SalBow1G5261 Salvia bowleyana HOM05D007275 ORTHO05D009279 3.5e-30 134.8 96 69.8
Nitab4.5_0000223g0330 Nicotiana tabacum HOM05D007275 ORTHO05D009279 4.6e-30 134.4 96 70.8
Migut.A00668 Erythranthe guttata HOM05D007275 ORTHO05D009279 1.7e-29 132.5 92 70.7
FAN08G0060 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.7e-29 132.5 96 67.7
TWI60G1254 Tripterygium wilfordii HOM05D007275 ORTHO05D009279 3.3e-28 128.3 92 69.6
ECA246G4125 Erigeron canadensis HOM05D007275 ORTHO05D009279 4.3e-28 127.9 93 66.7
ClCG07G014960 Citrullus lanatus HOM05D007275 ORTHO05D009279 5.6e-28 127.5 87 70.1
Lsat_1_v5_gn_3_10301 Lactuca sativa HOM05D007275 ORTHO05D009279 9.5e-28 126.7 94 66.0
HanXRQChr06g0166541 Helianthus annuus HOM05D007275 ORTHO05D009279 1.6e-27 125.9 95 66.3
Aqoxy7G00131 Aquilegia oxysepala HOM05D007275 ORTHO05D009279 2.1e-27 125.6 96 66.7
AUR62019826 Chenopodium quinoa HOM05D007275 ORTHO05D009279 6.2e-27 124.0 75 80.0
CsaV3_4G006490 Cucumis sativus L. HOM05D007275 ORTHO05D009279 1.1e-26 123.2 93 66.7
Sed0004885 Sechium edule HOM05D007275 ORTHO05D009279 1.1e-26 123.2 93 67.7
Zm00001eb338790 Zea mays HOM05D007275 ORTHO05D009279 1.8e-26 122.5 97 67.0
MELO3C032816.2 Cucumis melo HOM05D007275 ORTHO05D009279 2.3e-26 122.1 87 70.1
FAN13G1788 Fragaria x ananassa HOM05D007275 ORTHO05D009279 3.1e-26 121.7 125 54.4
HanXRQChr17g0535191 Helianthus annuus HOM05D007275 ORTHO05D009279 6.8e-26 120.6 88 64.8
Hma1.2p1_2596F.1_g325120 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 2.6e-25 118.6 68 88.2
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 1.3e-24 116.3 69 78.3
Nitab4.5_0007661g0010 Nicotiana tabacum HOM05D007275 ORTHO05D009279 3.7e-24 114.8 73 74.0
BcaC09g50944 Brassica carinata HOM05D007275 ORTHO05D009279 6.4e-24 114.0 94 59.6
A01p15130 Brassica napus HOM05D007275 ORTHO05D009279 6.4e-24 114.0 94 59.6
C01p19030 Brassica napus HOM05D007275 ORTHO05D009279 6.4e-24 114.0 94 59.6
BolC1t01829H Brassica oleracea HOM05D007275 ORTHO05D009279 6.4e-24 114.0 94 59.6
ATR0320G041 Amborella trichopoda HOM05D007275 ORTHO05D009279 1.1e-23 113.2 88 64.8
BcaNung01088 Brassica carinata HOM05D007275 ORTHO05D009279 1.4e-23 112.8 94 59.6
BcaNung01089 Brassica carinata HOM05D007275 ORTHO05D009279 1.4e-23 112.8 94 59.6
CSS0026606 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 1.4e-23 112.8 68 77.9
unitig_748.g8124 Utricularia gibba HOM05D007275 ORTHO05D009279 1.4e-23 112.8 86 69.8
Psat7g026480 Pisum sativum HOM05D007275 ORTHO05D009279 1.9e-23 112.5 92 65.2
CDE10G0124 Ceratophyllum demersum HOM05D007275 ORTHO05D009279 7.1e-23 110.5 82 65.9
CDE10G0242 Ceratophyllum demersum HOM05D000974 ORTHO05D002201 9.2e-23 110.2 83 65.1
Oeu063532.1 Olea europaea HOM05D007275 ORTHO05D009279 2.7e-22 108.6 84 66.7
Duzib068G1121 Durio zibethinus HOM05D007275 ORTHO05D009279 4.6e-22 107.8 71 78.9
SEGI_25349 Sequoiadendron giganteum HOM05D007275 ORTHO05D009279 1.2e-19 99.8 94 54.3
Rhsim02G0242000 Rhododendron simsii HOM05D007275 ORTHO05D009279 3.6e-19 98.2 67 77.6
FAN04G0348 Fragaria x ananassa HOM05D007275 ORTHO05D009279 6.8e-18 94.0 97 53.6
Lalb_Chr16g0390631 Lupinus albus HOM05D007275 ORTHO05D009279 7.8e-14 80.5 50 78.0
Thhalv10027148m.g Eutrema salsugineum HOM05D007275 ORTHO05D009279 3.9e-13 78.2 67 59.7
Aqoxy2G01184 Aquilegia oxysepala HOM05D000015 ORTHO05D009146 2.4e-07 58.9 93 43.0
Aqoxy1G02962 Aquilegia oxysepala HOM05D000015 ORTHO05D009146 7.1e-07 57.4 93 41.9
Dinv13936 Davidia involucrata HOM05D000015 ORTHO05D009146 7.1e-07 57.4 56 53.6
HanXRQChr15g0470561 Helianthus annuus HOM05D000015 ORTHO05D009146 1.2e-06 56.6 74 45.9
QL03p004924 Quercus lobata HOM05D000015 ORTHO05D009146 2.7e-06 55.5 56 53.6
QL05p071991 Quercus lobata HOM05D000015 ORTHO05D009146 2.7e-06 55.5 56 53.6
ECA236G1637 Erigeron canadensis HOM05D000015 ORTHO05D009146 3.5e-06 55.1 88 38.6
GSVIVG01004808001 Vitis vinifera HOM05D000015 ORTHO05D009146 3.5e-06 55.1 56 51.8
CANSAT56G2899 Cannabis sativa HOM05D000015 ORTHO05D009146 4.6e-06 54.7 55 50.9
Medtr4g132620 Medicago truncatula HOM05D000015 ORTHO05D009146 4.6e-06 54.7 56 51.8
Sabra11G0008100 Salix brachista HOM05D000015 ORTHO05D009146 4.6e-06 54.7 56 50.0
Manes.17G027600 Manihot esculenta HOM05D000015 ORTHO05D009146 6.0e-06 54.3 78 41.0
VMungo1215G0634 Vigna mungo HOM05D000015 ORTHO05D009146 7.8e-06 53.9 87 37.9


User provided reference genes

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