Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G297400 Phaseolus vulgaris HOM05D006525 ORTHO05D007845 4.0e-125 451.4 226 100.0
VMungo0251G1352 Vigna mungo HOM05D006525 ORTHO05D007845 1.2e-113 413.3 221 94.1
Glyma.08G022100 Glycine max HOM05D006525 ORTHO05D007845 1.2e-110 403.3 226 88.1
Medtr8g099380 Medicago truncatula HOM05D006525 ORTHO05D007845 1.6e-105 386.3 231 85.7
Lj4g0012415 Lotus japonicus HOM05D006525 ORTHO05D007845 7.8e-105 384.0 230 84.3
Ca_17485_v3 Cicer arietinum L. HOM05D006525 ORTHO05D007845 6.6e-104 380.9 230 84.8
Psat7g027440 Pisum sativum HOM05D006525 ORTHO05D007845 4.0e-101 371.7 232 80.6
arahy.Tifrunner.gnm1.ann1.3UM0RM Arachis hypogaea HOM05D006525 ORTHO05D007845 2.4e-98 362.5 233 77.3
Lalb_Chr16g0390611 Lupinus albus HOM05D006525 ORTHO05D007845 2.7e-97 359.0 230 79.6
arahy.Tifrunner.gnm1.ann1.56CREW Arachis hypogaea HOM05D006525 ORTHO05D007845 2.5e-95 352.4 243 74.1
Thecc.03G295800 Theobroma cacao HOM05D006525 ORTHO05D007845 1.6e-89 333.2 239 70.7
Potri.001G092800 Populus trichocarpa HOM05D006525 ORTHO05D007845 5.1e-88 328.2 227 70.9
CANSAT21G0126 Cannabis sativa HOM05D006525 ORTHO05D007845 6.6e-88 327.8 234 70.1
MD14G1123300 Malus domestica HOM05D006525 ORTHO05D007845 7.3e-87 324.3 209 75.6
TWI15G0402 Tripterygium wilfordii HOM05D006525 ORTHO05D007845 2.1e-86 322.8 226 70.4
Duzib068G0461 Durio zibethinus HOM05D006525 ORTHO05D007845 2.8e-86 322.4 227 70.5
Dinv37543 Davidia involucrata HOM05D006525 ORTHO05D007845 3.6e-86 322.0 202 76.2
Prupe.5G117200 Prunus persica HOM05D006525 ORTHO05D007845 3.6e-86 322.0 234 69.7
FAN18G4350 Fragaria x ananassa HOM05D006525 ORTHO05D007845 4.7e-86 321.6 221 73.3
Sabra01G0069100 Salix brachista HOM05D006525 ORTHO05D007845 8.1e-86 320.9 229 69.4
Cpa.g.sc79.53 Carica papaya HOM05D006525 ORTHO05D007845 1.8e-85 319.7 215 71.6
FAN13G2324 Fragaria x ananassa HOM05D006525 ORTHO05D007845 1.8e-85 319.7 224 72.3
Gorai.007G025600 Gossypium raimondii HOM05D006525 ORTHO05D007845 1.8e-85 319.7 232 67.2
QL02p030956 Quercus lobata HOM05D006525 ORTHO05D007845 1.8e-85 319.7 206 76.2
GSVIVG01019512001 Vitis vinifera HOM05D006525 ORTHO05D007845 1.8e-85 319.7 204 74.5
EL10Ac5g12902 Beta vulgaris HOM05D006525 ORTHO05D007845 2.4e-85 319.3 229 66.8
Atru.chr9.2016 Acer truncatum HOM05D006525 ORTHO05D007845 6.8e-85 317.8 200 76.0
Gohir.D11G024000 Gossypium hirsutum HOM05D006525 ORTHO05D007845 8.9e-85 317.4 232 66.8
Ciclev10022095m.g Citrus clementina HOM05D006525 ORTHO05D007845 1.5e-84 316.6 224 68.8
Haze_08630 Corylus avellana HOM05D006525 ORTHO05D007845 3.4e-84 315.5 212 73.6
Sp7g00260 Schrenkiella parvula HOM05D006525 ORTHO05D007845 7.6e-84 314.3 234 65.8
THA.LOC104817658 Tarenaya hassleriana HOM05D006525 ORTHO05D007845 7.6e-84 314.3 228 68.4
RcHm_v2.0_Chr7g0195151 Rosa chinensis HOM05D006525 ORTHO05D007845 1.7e-83 313.2 201 75.6
FAN08G2482 Fragaria x ananassa HOM05D000027 ORTHO05D007845 3.8e-83 312.0 200 76.5
CiPaw.11G122700 Carya illinoinensis HOM05D006525 ORTHO05D007845 8.4e-83 310.8 201 75.1
PGR031G0465 Punica granatum HOM05D006525 ORTHO05D007845 8.4e-83 310.8 230 65.7
Gohir.A11G024300 Gossypium hirsutum HOM05D006525 ORTHO05D007845 1.4e-82 310.1 232 67.2
MSTRG.11933 Avicennia marina HOM05D006525 ORTHO05D007845 2.4e-82 309.3 212 70.3
Cfa022937 Carpinus fangiana HOM05D006525 ORTHO05D007845 3.2e-82 308.9 200 75.0
Hund11396 Selenicereus undatus HOM05D006525 ORTHO05D007845 4.2e-82 308.5 218 67.9
Sopen08g030430 Solanum pennellii HOM05D006525 ORTHO05D007845 4.2e-82 308.5 207 71.5
BraA07t29782Z Brassica rapa HOM05D006525 ORTHO05D007845 9.3e-82 307.4 220 67.7
Os05g0214400 Oryza sativa ssp. japonica HOM05D006525 ORTHO05D007845 1.6e-81 306.6 232 64.7
vmacro11437 Vaccinium macrocarpon HOM05D006525 ORTHO05D007845 1.6e-81 306.6 200 72.5
Cc08_g15920 Coffea canephora HOM05D006525 ORTHO05D007845 2.1e-81 306.2 214 67.3
Manes.01G047000 Manihot esculenta HOM05D006525 ORTHO05D007845 2.1e-81 306.2 199 73.4
CAN.G532.106 Capsicum annuum HOM05D006525 ORTHO05D007845 2.7e-81 305.8 208 72.1
Rhsim02G0241900 Rhododendron simsii HOM05D006525 ORTHO05D007845 2.7e-81 305.8 202 72.3
PGSC0003DMG400012159 Solanum tuberosum HOM05D006525 ORTHO05D007845 4.6e-81 305.1 211 69.2
C06p20270 Brassica napus HOM05D006525 ORTHO05D007845 6.0e-81 304.7 211 70.6
BolC6t37207H Brassica oleracea HOM05D006525 ORTHO05D007845 6.0e-81 304.7 211 70.6
AT5G41850 Arabidopsis thaliana HOM05D006525 ORTHO05D007845 7.8e-81 304.3 219 67.1
MELO3C005745.2 Cucumis melo HOM05D006525 ORTHO05D007845 1.3e-80 303.5 230 63.9
Actinidia22144 Actinidia chinensis HOM05D006525 ORTHO05D007845 1.7e-80 303.1 203 71.4
Hma1.2p1_0359F.1_g135310 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 1.7e-80 303.1 199 73.4
SalBow1G4596 Salvia bowleyana HOM05D006525 ORTHO05D007845 1.7e-80 303.1 202 71.8
A07p20960 Brassica napus HOM05D006525 ORTHO05D007845 2.3e-80 302.8 228 65.8
SalBow1G2372 Salvia bowleyana HOM05D006525 ORTHO05D007845 5.1e-80 301.6 202 71.3
DCAR_027712 Daucus carota HOM05D006525 ORTHO05D007845 6.6e-80 301.2 203 71.4
BcaB02g07875 Brassica carinata HOM05D006525 ORTHO05D007845 1.1e-79 300.4 228 65.8
BcaC08g44560 Brassica carinata HOM05D006525 ORTHO05D007845 1.1e-79 300.4 211 70.1
CSS0006968 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 1.1e-79 300.4 204 70.6
CsaV3_5G002090 Cucumis sativus L. HOM05D006525 ORTHO05D007845 1.5e-79 300.1 230 63.9
Migut.A00669 Erythranthe guttata HOM05D006525 ORTHO05D007845 1.5e-79 300.1 190 74.2
ClCG01G001950 Citrullus lanatus HOM05D006525 ORTHO05D007845 1.9e-79 299.7 235 63.0
Sed0028109 Sechium edule HOM05D006525 ORTHO05D007845 1.9e-79 299.7 233 62.7
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 9.6e-79 297.4 227 62.6
Aa31LG9G310 Aethionema arabicum HOM05D006525 ORTHO05D007845 1.3e-78 297.0 201 67.7
AUR62019825 Chenopodium quinoa HOM05D006525 ORTHO05D007845 1.3e-78 297.0 229 62.9
CARHR212710 Cardamine hirsuta HOM05D006525 ORTHO05D007845 2.1e-78 296.2 201 70.6
AL7G47380 Arabidopsis lyrata HOM05D006525 ORTHO05D007845 2.8e-78 295.8 224 63.8
Carub.0007s3351 Capsella rubella HOM05D006525 ORTHO05D007845 6.2e-78 294.7 220 65.0
Aqoxy5G04177 Aquilegia oxysepala HOM05D006525 ORTHO05D007845 2.4e-77 292.7 233 61.4
HPP92_000617 Vanilla planifolia HOM05D006525 ORTHO05D007845 2.4e-77 292.7 221 63.8
MBI07_g34229_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 3.1e-77 292.4 203 70.4
Eucgr.D01725 Eucalyptus grandis HOM05D006525 ORTHO05D007845 4.4e-76 288.5 198 71.7
Zm00001eb283820 Zea mays HOM05D006525 ORTHO05D007845 4.4e-76 288.5 201 69.2
ECA240G1071 Erigeron canadensis HOM05D006525 ORTHO05D007845 1.3e-75 287.0 219 63.5
HanXRQChr13g0415031 Helianthus annuus HOM05D006525 ORTHO05D007845 1.7e-75 286.6 215 64.7
PSO384G4490 Papaver somniferum HOM05D006525 ORTHO05D007845 1.1e-74 283.9 227 62.6
Oeu009950.2 Olea europaea HOM05D006525 ORTHO05D007845 4.2e-74 282.0 234 61.5
HanXRQChr17g0535171 Helianthus annuus HOM05D006525 ORTHO05D007845 1.2e-73 280.4 197 65.0
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 2.1e-73 279.6 225 59.6
ECA246G0134 Erigeron canadensis HOM05D006525 ORTHO05D007845 7.9e-73 277.7 202 61.9
TAR636G1454 Trochodendron aralioides HOM05D006525 ORTHO05D007845 7.9e-73 277.7 185 72.4
unitig_88.g27636 Utricularia gibba HOM05D006525 ORTHO05D007845 3.9e-72 275.4 201 64.7
MBI07_g34230_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 1.5e-71 273.5 183 73.2
Thhalv10028271m.g Eutrema salsugineum HOM05D006525 ORTHO05D007845 1.3e-70 270.4 216 60.6
SGA_v2.0_scaffold96G28973 Striga asiatica HOM05D006525 ORTHO05D007845 1.6e-70 270.0 181 73.5
PSO339G1283 Papaver somniferum HOM05D006525 ORTHO05D007845 8.1e-70 267.7 236 56.8
TPR.G3436 Trifolium pratense HOM05D006525 ORTHO05D007845 2.4e-69 266.2 163 82.2
AUR62010826 Chenopodium quinoa HOM05D006525 ORTHO05D007845 4.0e-69 265.4 231 59.3
Lsat_1_v5_gn_3_10281 Lactuca sativa HOM05D006525 ORTHO05D007845 9.9e-68 260.8 217 57.1
Nitab4.5_0010144g0010 Nicotiana tabacum HOM05D006525 ORTHO05D007845 2.2e-67 259.6 209 64.6
Nitab4.5_0000223g0360 Nicotiana tabacum HOM05D006525 ORTHO05D007845 2.9e-67 259.2 174 73.0
SMO290G0001 Selaginella moellendorffii HOM05D006525 ORTHO05D007845 1.2e-65 253.8 202 60.4
Lsat_1_v5_gn_6_84361 Lactuca sativa HOM05D006525 ORTHO05D007845 1.8e-64 250.0 181 65.2
HanXRQChr06g0166551 Helianthus annuus HOM05D006525 ORTHO05D007845 1.1e-61 240.7 198 58.1
Lj2A170G33 Lonicera japonica HOM05D006525 ORTHO05D007845 5.3e-61 238.4 158 72.2
CBR_g29721 Chara braunii HOM05D006525 ORTHO05D007845 4.6e-57 225.3 203 52.2
Nn3g19049 Nelumbo nucifera HOM05D006525 ORTHO05D007845 1.9e-55 219.9 157 68.8
Glyma.05G216200 Glycine max HOM05D006525 ORTHO05D007845 7.2e-50 201.4 114 87.7
MBI07_g27263_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 5.7e-47 191.8 182 57.7
FvH4_5g04410 Fragaria vesca HOM05D006525 ORTHO05D007845 4.8e-46 188.7 132 70.5
Pp3c22_1320 Physcomitrium patens HOM05D006525 ORTHO05D007845 1.5e-44 183.7 133 63.9
Hma1.2p1_0359F.1_g135320 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 1.0e-40 171.0 113 72.6
Sc22g0005060 Simmondsia chinensis HOM05D006525 ORTHO05D007845 2.3e-40 169.9 134 63.4
CSS0025848 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 2.0e-39 166.8 114 69.3
Solyc08g082150.2 Solanum lycopersicum HOM05D006525 ORTHO05D007845 3.2e-34 149.4 96 70.8
MD06G1104500 Malus domestica HOM05D006525 ORTHO05D007845 5.1e-32 142.1 117 65.8
TPR.G20444 Trifolium pratense HOM05D006525 ORTHO05D007845 1.1e-31 141.0 85 84.7
Hma1.2p1_0359F.1_g135300 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 3.3e-31 139.4 87 74.7
CSS0015265 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 4.4e-31 139.0 92 71.7
Peaxi162Scf00074g01026 Petunia axillaris HOM05D006525 ORTHO05D007845 7.7e-28 128.3 104 64.4
ATR0589G090 Amborella trichopoda HOM05D006525 ORTHO05D007845 1.9e-26 123.6 88 68.2
BcaNung06853 Brassica carinata HOM05D006525 ORTHO05D007845 3.2e-26 122.9 84 69.0
SEGI_26681 Sequoiadendron giganteum HOM05D006525 ORTHO05D007845 4.0e-24 115.9 87 66.7
AagrBONN_evm.TU.Sc2ySwM_368.643 Anthoceros agrestis HOM05D006525 ORTHO05D007845 6.3e-22 108.6 79 62.0
Pp3c22_17300 Physcomitrium patens HOM05D006525 ORTHO05D007845 1.1e-21 107.8 88 60.2
MD06G1104600 Malus domestica HOM05D006525 ORTHO05D007845 1.5e-18 97.4 70 62.9
HanXRQChr03g0061741 Helianthus annuus HOM05D006525 ORTHO05D007845 1.9e-18 97.1 68 63.2
Sc22g0005070 Simmondsia chinensis HOM05D006525 ORTHO05D007845 2.5e-18 96.7 68 66.2
PGSC0003DMG400026824 Solanum tuberosum HOM05D006525 ORTHO05D007845 8.0e-17 91.7 71 63.4
Lalb_Chr09g0332581 Lupinus albus HOM05D006525 ORTHO05D007845 1.6e-12 77.4 52 73.1


User provided reference genes

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