Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G295000 Phaseolus vulgaris HOM05D007339 ORTHO05D009302 5.9e-211 737.3 369 100.0
VMungo0251G0376 Vigna mungo HOM05D007339 ORTHO05D009302 6.8e-199 697.2 369 93.8
Glyma.05G213600 Glycine max HOM05D007339 ORTHO05D009302 2.2e-181 639.0 369 86.4
Lj4g0000586 Lotus japonicus HOM05D007339 ORTHO05D009302 1.5e-174 616.3 368 83.7
LjContig00001g0019220 Lotus japonicus HOM05D007339 ORTHO05D009302 1.5e-174 616.3 368 83.7
LjContig00001g0022561 Lotus japonicus HOM05D007339 ORTHO05D009302 1.5e-174 616.3 368 83.7
arahy.Tifrunner.gnm1.ann1.3U28WJ Arachis hypogaea HOM05D007339 ORTHO05D009302 5.4e-164 581.3 356 80.9
arahy.Tifrunner.gnm1.ann1.XUAZ2L Arachis hypogaea HOM05D007339 ORTHO05D009302 4.6e-163 578.2 356 80.3
Lalb_Chr05g0224341 Lupinus albus HOM05D007339 ORTHO05D009302 6.0e-163 577.8 365 78.6
arahy.Tifrunner.gnm1.ann1.CS5PRD Arachis hypogaea HOM05D007339 ORTHO05D009302 3.9e-162 575.1 356 79.8
Medtr8g099160 Medicago truncatula HOM05D007339 ORTHO05D009302 9.0e-159 563.9 362 77.3
Ca_17504_v3 Cicer arietinum L. HOM05D007339 ORTHO05D009302 5.8e-158 561.2 358 77.4
Psat7g028320 Pisum sativum HOM05D007339 ORTHO05D009302 3.5e-155 552.0 363 74.7
Cfa012282 Carpinus fangiana HOM05D007339 ORTHO05D009302 9.3e-148 527.3 367 71.7
MD14G1117300 Malus domestica HOM05D007339 ORTHO05D009302 1.6e-147 526.6 351 72.6
Actinidia01410 Actinidia chinensis HOM05D007339 ORTHO05D009302 1.0e-146 523.9 354 72.3
TAR629G0408 Trochodendron aralioides HOM05D007339 ORTHO05D009302 3.9e-146 521.9 365 71.5
FAN04G0801 Fragaria x ananassa HOM05D007339 ORTHO05D009302 6.7e-146 521.2 354 72.6
FAN08G0386 Fragaria x ananassa HOM05D007339 ORTHO05D009302 8.7e-146 520.8 354 72.3
QL02p032076 Quercus lobata HOM05D007339 ORTHO05D009302 1.8e-143 513.1 366 69.9
Nn1g08390 Nelumbo nucifera HOM05D007339 ORTHO05D009302 3.1e-143 512.3 361 68.7
Potri.003G135200 Populus trichocarpa HOM05D007339 ORTHO05D009302 3.1e-143 512.3 361 70.6
TWI60G1048 Tripterygium wilfordii HOM05D007339 ORTHO05D009302 4.0e-143 511.9 355 71.0
Gohir.D12G235400 Gossypium hirsutum HOM05D007339 ORTHO05D009302 1.7e-141 506.5 353 71.4
Gorai.008G251600 Gossypium raimondii HOM05D007339 ORTHO05D009302 4.9e-141 505.0 353 71.1
Sabra03G0097300 Salix brachista HOM05D007339 ORTHO05D009302 8.4e-141 504.2 361 69.3
CSS0003086 Camellia sinensis var. sinensis HOM05D007339 ORTHO05D009302 2.5e-140 502.7 368 68.2
FAN13G2341 Fragaria x ananassa HOM05D007339 ORTHO05D009302 3.2e-140 502.3 353 70.8
Dinv37563 Davidia involucrata HOM05D007339 ORTHO05D009302 1.2e-139 500.4 398 63.3
Cc08_g15580 Coffea canephora HOM05D007339 ORTHO05D009302 7.9e-139 497.7 358 70.4
Eucgr.D01785 Eucalyptus grandis HOM05D007339 ORTHO05D009302 1.3e-138 496.9 358 68.7
Oeu008834.1 Olea europaea HOM05D007339 ORTHO05D009302 1.8e-138 496.5 364 66.5
COL.COLO4_21749 Corchorus olitorius HOM05D007339 ORTHO05D009302 1.1e-137 493.8 362 68.5
EL10Ac5g12862 Beta vulgaris HOM05D007339 ORTHO05D009302 1.9e-137 493.0 353 68.8
CsaV3_2G033870 Cucumis sativus L. HOM05D007339 ORTHO05D009302 2.5e-137 492.7 357 68.1
PGSC0003DMG400005010 Solanum tuberosum HOM05D007339 ORTHO05D009302 1.3e-136 490.3 365 65.8
MELO3C008161.2 Cucumis melo HOM05D007339 ORTHO05D009302 1.6e-136 490.0 357 67.5
Solyc12g056150.2 Solanum lycopersicum HOM05D007339 ORTHO05D009302 2.1e-136 489.6 365 66.0
Sed0025077 Sechium edule HOM05D007339 ORTHO05D009302 2.8e-136 489.2 357 67.5
Cpa.g.c31793 Carica papaya HOM05D007339 ORTHO05D009302 3.7e-136 488.8 354 68.9
AUR62010789 Chenopodium quinoa HOM05D007339 ORTHO05D009302 3.7e-136 488.8 350 69.1
DCAR_027743 Daucus carota HOM05D007339 ORTHO05D009302 8.2e-136 487.6 352 68.8
AUR62019785 Chenopodium quinoa HOM05D007339 ORTHO05D009302 1.4e-135 486.9 350 69.1
Sopen12g028660 Solanum pennellii HOM05D007339 ORTHO05D009302 1.8e-135 486.5 365 65.2
PGR031G1180 Punica granatum HOM05D007339 ORTHO05D009302 9.0e-135 484.2 352 66.2
Prupe.5G112000 Prunus persica HOM05D007339 ORTHO05D009302 1.5e-134 483.4 357 68.1
vmacro11423 Vaccinium macrocarpon HOM05D007339 ORTHO05D009302 2.6e-134 482.6 359 66.0
Sc01g0010030 Simmondsia chinensis HOM05D007339 ORTHO05D009302 3.4e-134 482.3 359 66.0
ClCG11G007690 Citrullus lanatus HOM05D007339 ORTHO05D009302 4.5e-134 481.9 357 66.7
CANSAT21G2628 Cannabis sativa HOM05D007339 ORTHO05D009302 5.8e-134 481.5 356 66.6
FAN13G1997 Fragaria x ananassa HOM05D007339 ORTHO05D009302 2.2e-133 479.6 353 68.3
Rhsim02G0238900 Rhododendron simsii HOM05D007339 ORTHO05D009302 4.9e-133 478.4 363 65.3
CAN.G868.7 Capsicum annuum HOM05D007339 ORTHO05D009302 1.1e-132 477.2 363 65.0
SalBow1G6752 Salvia bowleyana HOM05D007339 ORTHO05D009302 2.5e-132 476.1 358 65.6
Migut.E01224 Erythranthe guttata HOM05D007339 ORTHO05D009302 5.5e-132 474.9 354 67.5
Haze_08703 Corylus avellana HOM05D007339 ORTHO05D009302 7.1e-132 474.6 367 66.5
Lsat_1_v5_gn_3_9640 Lactuca sativa HOM05D007339 ORTHO05D009302 7.1e-132 474.6 353 64.6
Hund14247 Selenicereus undatus HOM05D007339 ORTHO05D009302 1.6e-131 473.4 352 67.0
ECA246G1762 Erigeron canadensis HOM05D007339 ORTHO05D009302 7.9e-131 471.1 355 63.4
Manes.02G014000 Manihot esculenta HOM05D007339 ORTHO05D009302 1.5e-129 466.8 326 70.9
HanXRQChr17g0535521 Helianthus annuus HOM05D007339 ORTHO05D009302 2.5e-129 466.1 354 64.7
Lj2A174T87 Lonicera japonica HOM05D007339 ORTHO05D009302 7.4e-129 464.5 359 65.7
RcHm_v2.0_Chr7g0195891 Rosa chinensis HOM05D007339 ORTHO05D009302 9.7e-129 464.2 326 69.9
unitig_22.g6184 Utricularia gibba HOM05D007339 ORTHO05D009302 8.2e-128 461.1 354 65.8
CDE03G0219 Ceratophyllum demersum HOM05D007339 ORTHO05D009302 1.4e-127 460.3 354 65.3
MBI11_g07997_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 9.0e-127 457.6 415 58.3
MBI11_g02478_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 1.2e-126 457.2 397 60.7
Peaxi162Scf00117g01517 Petunia axillaris HOM05D007339 ORTHO05D009302 1.2e-126 457.2 360 62.8
GSVIVG01019463001 Vitis vinifera HOM05D007339 ORTHO05D009302 2.3e-122 443.0 357 62.7
Gohir.A12G231900 Gossypium hirsutum HOM05D007339 ORTHO05D009302 8.8e-122 441.0 316 69.9
ATR0585G140 Amborella trichopoda HOM05D007339 ORTHO05D009302 1.7e-120 436.8 353 60.6
Ah.07g196890 Amaranthus hybridus HOM05D007339 ORTHO05D009302 1.4e-119 433.7 318 66.7
Thecc.03G290600 Theobroma cacao HOM05D007339 ORTHO05D009302 5.3e-119 431.8 316 68.0
Eucgr.D01783 Eucalyptus grandis HOM05D007339 ORTHO05D009302 4.5e-118 428.7 328 66.2
HPP92_020016 Vanilla planifolia HOM05D007339 ORTHO05D009302 4.5e-118 428.7 355 57.7
Nitab4.5_0002381g0050 Nicotiana tabacum HOM05D007339 ORTHO05D009302 3.6e-115 419.1 363 58.7
Zm00001eb119650 Zea mays HOM05D007339 ORTHO05D009302 7.9e-115 417.9 356 56.7
Nitab4.5_0004603g0010 Nicotiana tabacum HOM05D007339 ORTHO05D009302 1.5e-110 403.7 357 58.8
CiPaw.11G126100 Carya illinoinensis HOM05D007339 ORTHO05D009302 2.0e-110 403.3 366 57.1
Duzib068G0257 Durio zibethinus HOM05D007339 ORTHO05D009302 1.4e-106 390.6 292 66.8
Glyma.08G020200 Glycine max HOM05D007339 ORTHO05D009302 1.2e-94 350.9 214 84.1
SGA_v2.0_scaffold111G31453 Striga asiatica HOM05D007339 ORTHO05D009302 1.3e-93 347.4 351 53.3
Atru.chr9.2070 Acer truncatum HOM05D007339 ORTHO05D009302 3.8e-93 345.9 229 74.2
QL02p032031 Quercus lobata HOM05D007339 ORTHO05D009302 3.0e-90 336.3 249 68.7
Mapoly0105s0048 Marchantia polymorpha HOM05D007339 ORTHO05D009302 5.7e-89 332.0 343 47.8
Eucgr.D01784 Eucalyptus grandis HOM05D007339 ORTHO05D009302 1.3e-88 330.9 344 52.6
Pp3c9_13440 Physcomitrium patens HOM05D007339 ORTHO05D009302 3.7e-88 329.3 346 50.9
AagrBONN_evm.TU.Sc2ySwM_362.1772 Anthoceros agrestis HOM05D007339 ORTHO05D009302 2.7e-86 323.2 346 49.1
SMO340G0099 Selaginella moellendorffii HOM05D007339 ORTHO05D009302 3.0e-82 309.7 341 47.5
TPR.G3408 Trifolium pratense HOM05D007339 ORTHO05D009302 2.8e-75 286.6 189 77.2
TPR.G11473 Trifolium pratense HOM05D007339 ORTHO05D009302 7.5e-73 278.5 178 75.8
Atru.chr9.2069 Acer truncatum HOM05D007339 ORTHO05D009302 1.2e-67 261.2 302 50.0
CBR_g55541 Chara braunii HOM05D007339 ORTHO05D009302 4.9e-56 222.6 479 32.6
SEGI_02101 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 2.6e-41 173.7 171 53.2
SEGI_02509 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 2.7e-38 163.7 131 58.8
SEGI_37819 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 2.7e-38 163.7 131 58.8
Cre06.g285001 Chlamydomonas reinhardtii HOM05D007339 ORTHO05D009302 2.9e-32 143.7 259 36.3
AagrBONN_evm.TU.Sc2ySwM_368.3145 Anthoceros agrestis HOM05D007339 ORTHO05D009302 1.9e-28 131.0 178 42.7
SEGI_11472 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 1.2e-17 95.1 92 51.1
QL02p032024 Quercus lobata HOM05D007339 ORTHO05D009302 1.2e-14 85.1 64 64.1
Os01g0221900 Oryza sativa ssp. japonica HOM05D007339 ORTHO05D009302 3.5e-14 83.6 89 43.8
Sc20g0000110 Simmondsia chinensis HOM05D007339 ORTHO05D009302 7.9e-14 82.4 90 40.0
Dinv27585 Davidia involucrata HOM05D007339 ORTHO05D009302 6.3e-11 72.8 54 66.7


User provided reference genes

Program Settings