Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G293100 Phaseolus vulgaris HOM05D005438 ORTHO05D006744 4.4e-206 721.1 370 100.0
VMungo0251G0328 Vigna mungo HOM05D005438 ORTHO05D006744 3.2e-188 661.8 370 91.1
Glyma.08G018100 Glycine max HOM05D005438 ORTHO05D006744 7.6e-166 587.4 371 83.3
Glyma.05G211800 Glycine max HOM05D005438 ORTHO05D006744 2.2e-165 585.9 370 82.4
arahy.Tifrunner.gnm1.ann1.I29YTG Arachis hypogaea HOM05D005438 ORTHO05D006744 1.1e-159 567.0 367 79.6
arahy.Tifrunner.gnm1.ann1.Y7QUAU Arachis hypogaea HOM05D005438 ORTHO05D006744 1.4e-159 566.6 367 79.8
Ca_10950_v3 Cicer arietinum L. HOM05D005438 ORTHO05D006744 3.7e-152 542.0 373 76.9
Lj4g0011941 Lotus japonicus HOM05D005438 ORTHO05D006744 2.2e-149 532.7 378 74.1
Psat7g029680 Pisum sativum HOM05D005438 ORTHO05D006744 1.3e-144 516.9 373 73.7
Medtr8g098940 Medicago truncatula HOM05D005438 ORTHO05D006744 4.5e-142 508.4 372 73.9
TPR.G12953 Trifolium pratense HOM05D005438 ORTHO05D006744 1.3e-141 506.9 371 73.9
Lalb_Chr05g0224491 Lupinus albus HOM05D005438 ORTHO05D006744 5.5e-140 501.5 369 71.8
MD14G1111900 Malus domestica HOM05D005438 ORTHO05D006744 1.7e-125 453.4 371 64.4
CiPaw.11G129800 Carya illinoinensis HOM05D005438 ORTHO05D006744 2.2e-125 453.0 370 64.9
GSVIVG01019417001 Vitis vinifera HOM05D005438 ORTHO05D006744 7.2e-124 448.0 372 64.2
QL12p031793 Quercus lobata HOM05D005438 ORTHO05D006744 1.2e-123 447.2 408 60.0
Thecc.03G286500 Theobroma cacao HOM05D005438 ORTHO05D006744 2.7e-123 446.0 372 65.1
Atru.chr9.2115 Acer truncatum HOM05D005438 ORTHO05D006744 6.1e-123 444.9 377 63.4
Prupe.5G106500 Prunus persica HOM05D005438 ORTHO05D006744 1.4e-122 443.7 372 63.4
CANSAT21G0041 Cannabis sativa HOM05D005438 ORTHO05D006744 3.0e-122 442.6 377 63.9
COL.COLO4_08362 Corchorus olitorius HOM05D005438 ORTHO05D006744 3.3e-121 439.1 372 64.0
Duzib084G0802 Durio zibethinus HOM05D005438 ORTHO05D006744 5.7e-121 438.3 372 61.3
Gohir.D03G078500 Gossypium hirsutum HOM05D005438 ORTHO05D006744 4.8e-120 435.3 370 63.5
TAR374G1319 Trochodendron aralioides HOM05D005438 ORTHO05D006744 1.4e-119 433.7 372 62.4
MELO3C005715.2 Cucumis melo HOM05D005438 ORTHO05D006744 4.1e-119 432.2 375 63.5
Gohir.A02G105300 Gossypium hirsutum HOM05D005438 ORTHO05D006744 1.2e-118 430.6 370 63.0
Gorai.003G085600 Gossypium raimondii HOM05D005438 ORTHO05D006744 1.2e-118 430.6 374 63.1
CsaV3_5G002390 Cucumis sativus L. HOM05D005438 ORTHO05D006744 1.5e-118 430.3 375 62.9
Ciclev10020644m.g Citrus clementina HOM05D005438 ORTHO05D006744 3.5e-118 429.1 377 61.0
TWI60G1446 Tripterygium wilfordii HOM05D005438 ORTHO05D006744 4.5e-118 428.7 380 61.8
Sed0027839 Sechium edule HOM05D005438 ORTHO05D006744 7.7e-118 427.9 374 62.0
Sabra03G0095000 Salix brachista HOM05D005438 ORTHO05D006744 6.5e-117 424.9 414 56.5
Actinidia10609 Actinidia chinensis HOM05D005438 ORTHO05D006744 1.1e-116 424.1 375 58.7
Potri.003G132600 Populus trichocarpa HOM05D005438 ORTHO05D006744 1.5e-116 423.7 415 55.7
FvH4_5g03190 Fragaria vesca HOM05D005438 ORTHO05D006744 1.9e-116 423.3 377 62.3
Nitab4.5_0007906g0070 Nicotiana tabacum HOM05D005438 ORTHO05D006744 2.5e-116 422.9 369 60.7
FAN18G2027 Fragaria x ananassa HOM05D005438 ORTHO05D006744 4.2e-116 422.2 377 62.1
Peaxi162Scf00074g01737 Petunia axillaris HOM05D005438 ORTHO05D006744 5.5e-116 421.8 370 60.5
FAN13G0364 Fragaria x ananassa HOM05D005438 ORTHO05D006744 7.2e-116 421.4 377 61.8
RcHm_v2.0_Chr7g0196591 Rosa chinensis HOM05D005438 ORTHO05D006744 7.2e-116 421.4 374 62.0
Dinv37597 Davidia involucrata HOM05D005438 ORTHO05D006744 9.4e-116 421.0 375 60.0
FAN08G1515 Fragaria x ananassa HOM05D005438 ORTHO05D006744 9.4e-116 421.0 375 62.1
CAN.G532.38 Capsicum annuum HOM05D005438 ORTHO05D006744 1.2e-115 420.6 367 60.2
Duzib205G0010 Durio zibethinus HOM05D005438 ORTHO05D006744 2.1e-115 419.9 366 62.0
Rhsim02G0235700 Rhododendron simsii HOM05D005438 ORTHO05D006744 3.6e-115 419.1 371 59.6
PGSC0003DMG400012320 Solanum tuberosum HOM05D005438 ORTHO05D006744 2.3e-114 416.4 367 59.7
CSS0046697 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 3.0e-114 416.0 381 60.4
Nn1g01673 Nelumbo nucifera HOM05D005438 ORTHO05D006744 3.0e-114 416.0 399 57.1
Nitab4.5_0003015g0090 Nicotiana tabacum HOM05D005438 ORTHO05D006744 5.2e-114 415.2 370 60.0
FAN04G0810 Fragaria x ananassa HOM05D005438 ORTHO05D006744 6.7e-114 414.8 376 61.7
Atru.BG.199.p Acer truncatum HOM05D005438 ORTHO05D006744 2.0e-113 413.3 372 60.8
ECA233G5263 Erigeron canadensis HOM05D005438 ORTHO05D006744 3.3e-113 412.5 375 60.3
Lsat_1_v5_gn_3_8761 Lactuca sativa HOM05D005438 ORTHO05D006744 7.4e-113 411.4 372 61.8
HanXRQChr02g0049721 Helianthus annuus HOM05D005438 ORTHO05D006744 9.7e-113 411.0 383 59.5
Manes.01G057900 Manihot esculenta HOM05D005438 ORTHO05D006744 2.8e-112 409.5 409 56.7
Solyc08g081580.4 Solanum lycopersicum HOM05D005438 ORTHO05D006744 2.8e-112 409.5 365 58.6
Gorai.008G250200 Gossypium raimondii HOM05D005438 ORTHO05D006744 3.7e-112 409.1 373 61.1
DCAR_004611 Daucus carota HOM05D005438 ORTHO05D006744 5.3e-111 405.2 368 59.8
Eucgr.L02379 Eucalyptus grandis HOM05D005438 ORTHO05D006744 7.0e-111 404.8 371 60.6
Lj2C178T12 Lonicera japonica HOM05D005438 ORTHO05D006744 7.0e-111 404.8 376 56.9
Sopen08g029890 Solanum pennellii HOM05D005438 ORTHO05D006744 9.1e-111 404.4 366 58.5
Eucgr.D01812 Eucalyptus grandis HOM05D005438 ORTHO05D006744 1.2e-110 404.1 371 60.6
Gohir.D12G233900 Gossypium hirsutum HOM05D005438 ORTHO05D006744 2.0e-110 403.3 373 60.1
PGR031G2565 Punica granatum HOM05D005438 ORTHO05D006744 3.8e-109 399.1 374 59.9
Cc08_g15250 Coffea canephora HOM05D005438 ORTHO05D006744 5.0e-109 398.7 379 58.6
vmacro11410 Vaccinium macrocarpon HOM05D005438 ORTHO05D006744 2.5e-108 396.4 370 58.9
AUR62019752 Chenopodium quinoa HOM05D005438 ORTHO05D006744 4.2e-108 395.6 373 56.0
ClCG01G002320 Citrullus lanatus HOM05D005438 ORTHO05D006744 4.2e-108 395.6 374 58.3
AUR62010754 Chenopodium quinoa HOM05D005438 ORTHO05D006744 4.7e-107 392.1 371 55.8
Aqoxy7G00195 Aquilegia oxysepala HOM05D005438 ORTHO05D006744 5.2e-106 388.7 381 57.7
THA.LOC104817794 Tarenaya hassleriana HOM05D005438 ORTHO05D006744 6.8e-106 388.3 387 55.8
MD06G1091000 Malus domestica HOM05D005438 ORTHO05D006744 9.8e-105 384.4 371 57.7
Hund11433 Selenicereus undatus HOM05D005438 ORTHO05D006744 1.7e-104 383.6 378 56.9
Aa31LG2G1070 Aethionema arabicum HOM05D005438 ORTHO05D006744 6.3e-104 381.7 387 57.6
Migut.J01399 Erythranthe guttata HOM05D005438 ORTHO05D006744 1.4e-103 380.6 378 56.1
Ah.12g051920 Amaranthus hybridus HOM05D005438 ORTHO05D006744 2.7e-102 376.3 392 53.1
AL2G11130 Arabidopsis lyrata HOM05D005438 ORTHO05D006744 9.4e-100 367.9 398 54.0
Thhalv10023525m.g Eutrema salsugineum HOM05D005438 ORTHO05D006744 2.1e-99 366.7 389 55.3
AT1G63980 Arabidopsis thaliana HOM05D005438 ORTHO05D006744 2.7e-99 366.3 406 53.2
Carub.0002s0086 Capsella rubella HOM05D005438 ORTHO05D006744 2.7e-99 366.3 394 54.6
Gohir.A12G233400 Gossypium hirsutum HOM05D005438 ORTHO05D006744 3.6e-99 365.9 372 56.2
MBI11_g09068_MAGBIO Magnolia biondii HOM05D005438 ORTHO05D006744 8.0e-99 364.8 358 58.4
EL10Ac5g12834 Beta vulgaris HOM05D005438 ORTHO05D006744 1.8e-98 363.6 363 55.1
A09p14060 Brassica napus HOM05D005438 ORTHO05D006744 2.3e-98 363.2 408 53.4
BcaB07g31422 Brassica carinata HOM05D005438 ORTHO05D006744 4.0e-98 362.5 412 52.4
PSO017G3503 Papaver somniferum HOM05D005438 ORTHO05D006744 4.0e-98 362.5 394 54.1
PSO266G0069 Papaver somniferum HOM05D005438 ORTHO05D006744 8.8e-98 361.3 393 53.7
C09p18360 Brassica napus HOM05D005438 ORTHO05D006744 1.5e-97 360.5 418 52.6
BcaC04g22661 Brassica carinata HOM05D005438 ORTHO05D006744 2.0e-97 360.1 412 52.9
PSO478G3903 Papaver somniferum HOM05D005438 ORTHO05D006744 2.0e-97 360.1 393 53.7
A09p15160 Brassica napus HOM05D005438 ORTHO05D006744 2.6e-97 359.8 417 52.3
Migut.A00720 Erythranthe guttata HOM05D005438 ORTHO05D006744 1.3e-96 357.5 377 53.8
CARHR047000 Cardamine hirsuta HOM05D005438 ORTHO05D006744 2.8e-96 356.3 399 52.9
Sp2g00710 Schrenkiella parvula HOM05D005438 ORTHO05D006744 3.7e-96 355.9 419 50.8
BcaB07g31532 Brassica carinata HOM05D005438 ORTHO05D006744 6.3e-96 355.1 417 51.1
Os03g0125300 Oryza sativa ssp. japonica HOM05D005438 ORTHO05D006744 6.3e-96 355.1 393 53.7
BraA09t37053Z Brassica rapa HOM05D005438 ORTHO05D006744 2.4e-95 353.2 415 52.5
SGA_v2.0_scaffold173G39139 Striga asiatica HOM05D005438 ORTHO05D006744 2.4e-95 353.2 399 51.4
Zm00001eb001860 Zea mays HOM05D005438 ORTHO05D006744 1.2e-94 350.9 395 51.6
BraA09t37158Z Brassica rapa HOM05D005438 ORTHO05D006744 2.0e-94 350.1 417 51.3
BolC9t54729H Brassica oleracea HOM05D005438 ORTHO05D006744 2.7e-94 349.7 421 50.8
BolC9t54592H Brassica oleracea HOM05D005438 ORTHO05D006744 1.0e-93 347.8 416 51.9
C09p16950 Brassica napus HOM05D005438 ORTHO05D006744 6.6e-93 345.1 410 52.7
CSS0015982 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 2.0e-89 333.6 371 53.6
HanXRQChr17g0533211 Helianthus annuus HOM05D005438 ORTHO05D006744 9.8e-89 331.3 360 54.2
Sc01g0009850 Simmondsia chinensis HOM05D005438 ORTHO05D006744 1.3e-88 330.9 310 56.1
ATR0661G541 Amborella trichopoda HOM05D005438 ORTHO05D006744 1.8e-87 327.0 409 49.4
CDE04G0809 Ceratophyllum demersum HOM05D005438 ORTHO05D006744 2.7e-86 323.2 369 51.8
HPP92_021018 Vanilla planifolia HOM05D005438 ORTHO05D006744 9.5e-84 314.7 376 53.5
unitig_32.g10979 Utricularia gibba HOM05D005438 ORTHO05D006744 1.0e-82 311.2 328 53.7
SEGI_20773 Sequoiadendron giganteum HOM05D005438 ORTHO05D006744 2.3e-82 310.1 432 42.6
Haze_08758 Corylus avellana HOM05D005438 ORTHO05D006744 7.8e-78 295.0 283 58.0
SMO134G0098 Selaginella moellendorffii HOM05D005438 ORTHO05D006744 1.7e-53 214.2 366 39.3
Lsat_1_v5_gn_1_49360 Lactuca sativa HOM05D005438 ORTHO05D006744 2.1e-51 207.2 221 54.8
Lsat_1_v5_gn_5_103140 Lactuca sativa HOM05D005438 ORTHO05D006744 2.1e-51 207.2 221 54.8
Lsat_1_v5_gn_9_38321 Lactuca sativa HOM05D005438 ORTHO05D006744 2.1e-51 207.2 221 54.8
BcaC04g22519 Brassica carinata HOM05D005438 ORTHO05D006744 8.1e-51 205.3 282 47.2
Mapoly0090s0083 Marchantia polymorpha HOM05D005438 ORTHO05D006744 8.1e-51 205.3 321 41.4
Pp3c2_28530 Physcomitrium patens HOM05D005438 ORTHO05D006744 1.1e-50 204.9 413 37.0
SHI31900 Sapria himalayana HOM05D005438 ORTHO05D006744 2.7e-46 190.3 293 42.0
AagrBONN_evm.TU.Sc2ySwM_344.4712 Anthoceros agrestis HOM05D005438 ORTHO05D006744 4.0e-42 176.4 540 30.6
CSS0040427 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 1.7e-40 171.0 143 62.9
Actinidia28345 Actinidia chinensis HOM05D005438 ORTHO05D006744 4.6e-38 162.9 376 37.2
Cpa.g.sc631.4 Carica papaya HOM05D005438 ORTHO05D006744 1.1e-36 158.3 143 58.0
CDE12G0222 Ceratophyllum demersum HOM05D005438 ORTHO05D006744 4.0e-34 149.8 143 59.4
Pp3c7_27020 Physcomitrium patens HOM05D005438 ORTHO05D006744 4.9e-32 142.9 400 31.0
BcaNung05361 Brassica carinata HOM05D005438 ORTHO05D006744 1.1e-31 141.7 195 48.7
Cpa.g.c39085 Carica papaya HOM05D005438 ORTHO05D006744 1.4e-31 141.4 170 48.8
CBR_g35011 Chara braunii HOM05D005438 ORTHO05D006744 2.1e-27 127.5 313 32.3
Cre07.g347300 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D021338 2.3e-21 107.5 380 28.4
Cre07.g347400 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D006744 2.3e-21 107.5 380 28.4
ATR0661G444 Amborella trichopoda HOM05D005438 ORTHO05D006744 3.3e-20 103.6 178 42.1
ECA246G3112 Erigeron canadensis HOM05D005438 ORTHO05D006744 5.3e-18 96.3 105 50.5
HanXRQChr16g0521071 Helianthus annuus HOM05D005438 ORTHO05D006744 3.3e-12 77.0 45 80.0
ClCG01G002340 Citrullus lanatus HOM05D005438 ORTHO05D006744 6.3e-11 72.8 114 41.2
MCO11G547 Micromonas commoda HOM05D005438 ORTHO05D006744 1.6e-06 58.2 315 23.8
Cre01.g054000 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D006744 2.7e-06 57.4 77 40.3


User provided reference genes

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