Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G286700 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 5.6e-173 610.9 324 100.0
VMungo1080G1315 Vigna mungo HOM05D002373 ORTHO05D008661 3.4e-162 575.1 324 94.1
Glyma.12G224900 Glycine max HOM05D002373 ORTHO05D008661 3.8e-153 545.0 321 89.1
Psat5g243920 Pisum sativum HOM05D002373 ORTHO05D008661 3.2e-144 515.4 323 83.3
Medtr2g085340 Medicago truncatula HOM05D002373 ORTHO05D008661 1.6e-143 513.1 324 83.0
Lj3g0019501 Lotus japonicus HOM05D002373 ORTHO05D008661 2.1e-143 512.7 325 83.4
Lalb_Chr25g0286331 Lupinus albus HOM05D002373 ORTHO05D008661 1.8e-139 499.6 321 81.0
Ca_03504_v3 Cicer arietinum L. HOM05D002373 ORTHO05D008661 1.6e-135 486.5 325 79.7
arahy.Tifrunner.gnm1.ann1.CVL1T8 Arachis hypogaea HOM05D002373 ORTHO05D008661 1.8e-134 483.0 329 80.2
arahy.Tifrunner.gnm1.ann1.D1WMTZ Arachis hypogaea HOM05D002373 ORTHO05D008661 6.7e-134 481.1 329 80.2
TPR.G39017 Trifolium pratense HOM05D002373 ORTHO05D008661 8.5e-129 464.2 272 86.0
Phvul.005G072600 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 2.2e-121 439.5 237 96.2
COL.COLO4_27178 Corchorus olitorius HOM05D002373 ORTHO05D008661 1.0e-118 430.6 324 70.7
Ciclev10008924m.g Citrus clementina HOM05D002373 ORTHO05D008661 1.8e-118 429.9 330 67.9
FvH4_3g19840 Fragaria vesca HOM05D002373 ORTHO05D008661 6.7e-118 427.9 321 69.2
Prupe.4G180500 Prunus persica HOM05D002373 ORTHO05D008661 6.7e-118 427.9 322 71.1
RcHm_v2.0_Chr5g0033281 Rosa chinensis HOM05D002373 ORTHO05D008661 1.1e-117 427.2 322 69.3
CANSAT56G3654 Cannabis sativa HOM05D002373 ORTHO05D008661 2.0e-117 426.4 323 70.0
MD11G1252400 Malus domestica HOM05D002373 ORTHO05D008661 2.0e-117 426.4 323 70.6
TAR624G1149 Trochodendron aralioides HOM05D002373 ORTHO05D008661 2.0e-117 426.4 323 69.7
FAN25G2634 Fragaria x ananassa HOM05D002373 ORTHO05D008661 9.7e-117 424.1 322 69.6
Thecc.07G090300 Theobroma cacao HOM05D002373 ORTHO05D008661 9.7e-117 424.1 322 69.9
FAN11G3740 Fragaria x ananassa HOM05D002373 ORTHO05D008661 1.3e-116 423.7 321 68.8
Gohir.D13G151000 Gossypium hirsutum HOM05D002373 ORTHO05D008661 1.7e-116 423.3 322 68.6
Gohir.A13G146100 Gossypium hirsutum HOM05D002373 ORTHO05D008661 3.1e-115 419.1 322 68.3
Actinidia35249 Actinidia chinensis HOM05D002373 ORTHO05D008661 4.1e-115 418.7 322 66.8
DCAR_019560 Daucus carota HOM05D002373 ORTHO05D008661 7.0e-115 417.9 277 75.5
Cpa.g.sc80.70 Carica papaya HOM05D002373 ORTHO05D008661 1.6e-114 416.8 323 68.4
Nn1g04122 Nelumbo nucifera HOM05D002373 ORTHO05D008661 2.6e-114 416.0 276 75.0
GSVIVG01014327001 Vitis vinifera HOM05D002373 ORTHO05D008661 2.6e-114 416.0 323 67.2
THA.LOC104810464 Tarenaya hassleriana HOM05D002373 ORTHO05D008661 4.5e-114 415.2 325 67.4
HanXRQChr12g0364201 Helianthus annuus HOM05D002373 ORTHO05D008661 7.7e-114 414.5 276 73.2
CSS0006904 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 1.0e-113 414.1 322 65.2
MELO3C019408.2 Cucumis melo HOM05D002373 ORTHO05D008661 3.8e-113 412.1 323 66.9
CsaV3_3G019460 Cucumis sativus L. HOM05D002373 ORTHO05D008661 8.5e-113 411.0 323 67.2
Dinv20179 Davidia involucrata HOM05D002373 ORTHO05D008661 8.5e-113 411.0 324 66.7
Atru.BG.257.p Acer truncatum HOM05D002373 ORTHO05D008661 1.5e-112 410.2 254 79.5
Atru.BG.152.p Acer truncatum HOM05D002373 ORTHO05D008661 7.2e-112 407.9 254 79.1
MBI06_g23077_MAGBIO Magnolia biondii HOM05D002373 ORTHO05D008661 1.6e-111 406.8 315 67.6
Sed0026190 Sechium edule HOM05D002373 ORTHO05D008661 6.1e-111 404.8 325 65.8
AL1G61480 Arabidopsis lyrata HOM05D002373 ORTHO05D008661 1.4e-110 403.7 265 74.0
PGR083G2563 Punica granatum HOM05D002373 ORTHO05D008661 1.4e-110 403.7 332 65.1
ClCG05G009320 Citrullus lanatus HOM05D002373 ORTHO05D008661 4.0e-110 402.1 339 64.0
ECA240G3063 Erigeron canadensis HOM05D002373 ORTHO05D008661 1.2e-109 400.6 276 72.5
Aa31LG10G2010 Aethionema arabicum HOM05D002373 ORTHO05D008661 2.0e-109 399.8 324 64.5
Eucgr.F01146 Eucalyptus grandis HOM05D002373 ORTHO05D008661 2.6e-109 399.4 319 66.5
Potri.011G119800 Populus trichocarpa HOM05D002373 ORTHO05D008661 5.7e-109 398.3 327 65.7
A05p18620 Brassica napus HOM05D002373 ORTHO05D008661 7.5e-109 397.9 265 72.1
BraA05t20753Z Brassica rapa HOM05D002373 ORTHO05D008661 7.5e-109 397.9 265 72.1
CSS0005109 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 7.5e-109 397.9 322 63.7
Lsat_1_v5_gn_9_97941 Lactuca sativa HOM05D002373 ORTHO05D008661 1.7e-108 396.7 278 70.9
Migut.H01944 Erythranthe guttata HOM05D002373 ORTHO05D008661 2.2e-108 396.4 324 65.1
CARHR043340 Cardamine hirsuta HOM05D002373 ORTHO05D008661 2.8e-108 396.0 329 63.5
Cfa020577 Carpinus fangiana HOM05D002373 ORTHO05D008661 2.8e-108 396.0 323 64.7
QL08p022081 Quercus lobata HOM05D002373 ORTHO05D008661 3.7e-108 395.6 328 65.5
Thhalv10011660m.g Eutrema salsugineum HOM05D002373 ORTHO05D008661 6.3e-108 394.8 322 62.4
CAN.G213.9 Capsicum annuum HOM05D002373 ORTHO05D008661 8.3e-108 394.4 321 63.6
AT1G53120 Arabidopsis thaliana HOM05D002373 ORTHO05D008661 1.1e-107 394.0 327 63.9
MSTRG.12905 Avicennia marina HOM05D002373 ORTHO05D008661 1.1e-107 394.0 294 68.0
PGSC0003DMG400015321 Solanum tuberosum HOM05D002373 ORTHO05D008661 1.1e-107 394.0 322 63.0
BolC6t36626H Brassica oleracea HOM05D002373 ORTHO05D008661 3.1e-107 392.5 323 63.8
Sabra11G0104200 Salix brachista HOM05D002373 ORTHO05D008661 3.1e-107 392.5 271 71.6
BcaC08g44045 Brassica carinata HOM05D002373 ORTHO05D008661 4.1e-107 392.1 323 63.8
vmacro09529 Vaccinium macrocarpon HOM05D002373 ORTHO05D008661 5.3e-107 391.7 361 59.3
C06p14460 Brassica napus HOM05D002373 ORTHO05D008661 9.1e-107 391.0 323 63.8
Sp1g39670 Schrenkiella parvula HOM05D002373 ORTHO05D008661 9.1e-107 391.0 322 61.8
BcaB02g10929 Brassica carinata HOM05D002373 ORTHO05D005805 1.2e-106 390.6 325 64.3
Sopen12g007190 Solanum pennellii HOM05D002373 ORTHO05D008661 4.5e-106 388.7 322 62.1
Carub.0001s4228 Capsella rubella HOM05D002373 ORTHO05D008661 1.7e-105 386.7 323 62.2
Solyc12g013870.3 Solanum lycopersicum HOM05D002373 ORTHO05D008661 1.7e-105 386.7 322 61.8
Lj1C842T3 Lonicera japonica HOM05D002373 ORTHO05D008661 7.2e-104 381.3 322 62.7
Aqoxy1G02390 Aquilegia oxysepala HOM05D002373 ORTHO05D008661 2.1e-103 379.8 274 69.0
CiPaw.11G170200 Carya illinoinensis HOM05D002373 ORTHO05D008661 4.7e-103 378.6 345 60.0
FAN16G2188 Fragaria x ananassa HOM05D002373 ORTHO05D008661 1.0e-102 377.5 236 78.0
SGA_v2.0_scaffold70G23676 Striga asiatica HOM05D002373 ORTHO05D008661 1.8e-102 376.7 335 61.8
Zm00001eb153060 Zea mays HOM05D002373 ORTHO05D008661 4.0e-102 375.6 258 70.5
Manes.03G109500 Manihot esculenta HOM05D002373 ORTHO05D008661 1.5e-101 373.6 237 76.8
Os01g0747700 Oryza sativa ssp. japonica HOM05D002373 ORTHO05D008661 4.4e-101 372.1 258 69.0
EL10Ac4g08187 Beta vulgaris HOM05D002373 ORTHO05D008661 7.5e-101 371.3 277 65.7
AUR62019433 Chenopodium quinoa HOM05D002373 ORTHO05D008661 9.8e-101 370.9 283 67.1
HPP92_024439 Vanilla planifolia HOM05D002373 ORTHO05D008661 1.8e-99 366.7 328 60.1
AUR62039201 Chenopodium quinoa HOM05D002373 ORTHO05D008661 4.1e-99 365.5 283 66.8
Glyma.13G276400 Glycine max HOM05D002373 ORTHO05D008661 4.1e-99 365.5 248 80.6
Nitab4.5_0009292g0020 Nicotiana tabacum HOM05D002373 ORTHO05D008661 5.4e-99 365.2 254 69.3
Peaxi162Scf00000g03511 Petunia axillaris HOM05D002373 ORTHO05D008661 2.7e-98 362.8 302 61.9
Ah.06g184370 Amaranthus hybridus HOM05D002373 ORTHO05D008661 7.7e-98 361.3 270 65.9
CDE02G2303 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 1.7e-97 360.1 234 73.5
Hund20000 Selenicereus undatus HOM05D002373 ORTHO05D008661 2.9e-97 359.4 325 59.4
Gorai.013G170800 Gossypium raimondii HOM05D002373 ORTHO05D008661 4.0e-94 349.0 212 79.2
ATR0737G132 Amborella trichopoda HOM05D002373 ORTHO05D008661 8.9e-94 347.8 301 59.5
FAN21G4050 Fragaria x ananassa HOM05D002373 ORTHO05D008661 2.0e-93 346.7 212 79.2
TWI38G1988 Tripterygium wilfordii HOM05D002373 ORTHO05D008661 5.7e-93 345.1 267 68.9
unitig_26.g9527 Utricularia gibba HOM05D002373 ORTHO05D008661 2.2e-92 343.2 286 62.2
Rhsim04G0021500 Rhododendron simsii HOM05D002373 ORTHO05D008661 3.9e-89 332.4 277 63.5
Haze_09434 Corylus avellana HOM05D002373 ORTHO05D008661 6.6e-89 331.6 323 56.0
Nitab4.5_0000332g0080 Nicotiana tabacum HOM05D002373 ORTHO05D008661 5.2e-86 322.0 301 57.5
Sc03g0010080 Simmondsia chinensis HOM05D002373 ORTHO05D008661 2.2e-84 316.6 261 62.1
Oeu060559.2 Olea europaea HOM05D002373 ORTHO05D008661 3.0e-81 306.2 401 46.1
PSO541G6350 Papaver somniferum HOM05D002373 ORTHO05D008661 3.9e-81 305.8 270 60.7
Pp3c20_21790 Physcomitrium patens HOM05D002373 ORTHO05D008661 7.5e-77 291.6 281 54.4
AagrBONN_evm.TU.Sc2ySwM_344.3401 Anthoceros agrestis HOM05D002373 ORTHO05D008661 2.5e-72 276.6 281 50.9
SMO367G1013 Selaginella moellendorffii HOM05D002373 ORTHO05D008661 8.3e-68 261.5 243 55.1
Cre12.g502950 Chlamydomonas reinhardtii HOM05D002373 ORTHO05D008661 1.4e-67 260.8 251 52.6
Mapoly0051s0038 Marchantia polymorpha HOM05D002373 ORTHO05D008661 4.1e-67 259.2 277 49.1
Gorai.013G169000 Gossypium raimondii HOM05D002373 ORTHO05D008661 2.5e-64 250.0 219 60.7
CDE08G0691 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 8.7e-57 224.9 148 73.0
MCO14G219 Micromonas commoda HOM05D002373 ORTHO05D008661 3.4e-53 213.0 268 42.9
CSS0025404 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 2.8e-47 193.4 129 70.5
Thecc.07G090900 Theobroma cacao HOM05D002373 ORTHO05D008661 4.3e-40 169.5 110 74.5
Gohir.D13G152082 Gossypium hirsutum HOM05D002373 ORTHO05D008661 2.7e-34 150.2 88 86.4
Gorai.013G170900 Gossypium raimondii HOM05D002373 ORTHO05D008661 7.9e-34 148.7 88 86.4
Gohir.A13G147066 Gossypium hirsutum HOM05D002373 ORTHO05D008661 1.2e-29 134.8 81 84.0
A01p26780 Brassica napus HOM05D002373 ORTHO05D008661 2.9e-20 103.6 72 68.1
CSS0007182 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 7.9e-18 95.5 64 67.2
CSS0007754 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 3.9e-17 93.2 65 64.6
PRCOL_00005720 Prasinoderma coloniale HOM05D002373 ORTHO05D008661 8.8e-17 92.0 260 29.6
MD11G1248800 Malus domestica HOM05D002373 ORTHO05D008661 6.7e-09 65.9 157 38.9
BcaC05g28656 Brassica carinata HOM05D022203 ORTHO05D024331 2.8e-07 60.5 36 75.0
Atru.chr2.2601 Acer truncatum HOM05D002373 ORTHO05D013107 8.2e-07 58.9 35 77.1


User provided reference genes

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