Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G285400 Phaseolus vulgaris HOM05D006558 ORTHO05D008424 0.0e+00 1397.1 699 100.0
VMungo0251G1905 Vigna mungo HOM05D006558 ORTHO05D008424 0.0e+00 1238.0 700 90.6
Glyma.11G153500 Glycine max HOM05D006558 ORTHO05D008424 0.0e+00 1185.2 702 84.8
Ca_25408_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 8.1e-302 1040.0 700 75.4
Psat5g217480 Pisum sativum HOM05D006558 ORTHO05D008424 1.7e-299 1032.3 700 75.6
TPR.G9868 Trifolium pratense HOM05D006558 ORTHO05D008424 5.2e-293 1010.7 690 73.8
Lj3g0026268 Lotus japonicus HOM05D006558 ORTHO05D008424 2.9e-291 1005.0 709 72.5
Lalb_Chr25g0282291 Lupinus albus HOM05D006558 ORTHO05D008424 1.3e-288 996.1 700 72.7
Ca_25460_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 6.9e-277 957.2 662 74.3
QL04p014186 Quercus lobata HOM05D006558 ORTHO05D008424 5.9e-244 847.8 705 58.9
CiPaw.13G011700 Carya illinoinensis HOM05D006558 ORTHO05D008424 2.6e-236 822.4 701 59.2
Gohir.D06G185500 Gossypium hirsutum HOM05D006558 ORTHO05D008424 1.9e-234 816.2 705 59.9
Gorai.010G217100 Gossypium raimondii HOM05D006558 ORTHO05D008424 1.9e-234 816.2 705 59.9
Psat5g217880 Pisum sativum HOM05D006558 ORTHO05D008424 6.7e-232 807.7 510 78.6
TWI15G0624 Tripterygium wilfordii HOM05D006558 ORTHO05D008424 1.8e-229 799.7 711 56.7
Duzib106G1800 Durio zibethinus HOM05D006558 ORTHO05D008424 7.0e-229 797.7 683 59.6
Prupe.2G031500 Prunus persica HOM05D006558 ORTHO05D008424 1.6e-228 796.6 708 58.5
arahy.Tifrunner.gnm1.ann1.898F3G Arachis hypogaea HOM05D006558 ORTHO05D008424 1.5e-226 790.0 673 60.6
RcHm_v2.0_Chr1g0321321 Rosa chinensis HOM05D006558 ORTHO05D008424 3.6e-225 785.4 710 57.3
Ciclev10033512m.g Citrus clementina HOM05D006558 ORTHO05D008424 4.7e-225 785.0 700 56.4
Manes.12G022900 Manihot esculenta HOM05D006558 ORTHO05D008424 5.7e-223 778.1 706 55.1
FvH4_7g02620 Fragaria vesca HOM05D006558 ORTHO05D008424 1.4e-221 773.5 708 56.1
FAN01G2130 Fragaria x ananassa HOM05D006558 ORTHO05D008424 3.3e-218 762.3 724 54.8
Actinidia06260 Actinidia chinensis HOM05D006558 ORTHO05D008424 4.7e-217 758.4 703 56.3
FAN03G0498 Fragaria x ananassa HOM05D006558 ORTHO05D008424 5.2e-216 755.0 724 54.4
CANSAT78G0292 Cannabis sativa HOM05D006558 ORTHO05D008424 1.7e-214 750.0 698 54.0
TAR633G1807 Trochodendron aralioides HOM05D006558 ORTHO05D008424 4.9e-214 748.4 714 54.9
GSVIVG01000827001 Vitis vinifera HOM05D006558 ORTHO05D008424 1.8e-213 746.5 707 56.0
Potri.004G236000 Populus trichocarpa HOM05D006558 ORTHO05D008424 3.1e-213 745.7 704 55.0
CANSAT78G2064 Cannabis sativa HOM05D006558 ORTHO05D008424 2.0e-212 743.0 698 53.7
CsaV3_5G011280 Cucumis sativus L. HOM05D006558 ORTHO05D008424 2.3e-211 739.6 707 55.2
MELO3C016629.2 Cucumis melo HOM05D006558 ORTHO05D008424 2.9e-206 722.6 706 54.4
Sed0005595 Sechium edule HOM05D006558 ORTHO05D008424 3.3e-202 709.1 700 54.0
Sc11g0006630 Simmondsia chinensis HOM05D006558 ORTHO05D008424 8.0e-201 704.5 699 51.4
Rhsim07G0065000 Rhododendron simsii HOM05D006558 ORTHO05D008424 1.8e-200 703.4 761 50.3
Cc07_g20890 Coffea canephora HOM05D006558 ORTHO05D008424 1.2e-199 700.7 712 52.7
Haze_03062 Corylus avellana HOM05D006558 ORTHO05D008424 4.4e-199 698.7 609 58.0
Oeu006113.1 Olea europaea HOM05D006558 ORTHO05D008424 9.8e-199 697.6 698 52.7
PGR031G1286 Punica granatum HOM05D006558 ORTHO05D008424 3.7e-198 695.7 716 51.0
Aqoxy2G03825 Aquilegia oxysepala HOM05D006558 ORTHO05D008424 1.9e-197 693.3 709 50.9
Nn7g37154 Nelumbo nucifera HOM05D006558 ORTHO05D008424 3.2e-197 692.6 714 51.3
SGA_v2.0_scaffold232G43518 Striga asiatica HOM05D006558 ORTHO05D008424 1.6e-196 690.3 705 50.8
AL3G18860 Arabidopsis lyrata HOM05D006558 ORTHO05D008424 2.0e-196 689.9 707 49.9
AUR62037214 Chenopodium quinoa HOM05D006558 ORTHO05D008424 6.0e-196 688.3 696 51.4
HanXRQChr02g0050141 Helianthus annuus HOM05D006558 ORTHO05D008424 2.3e-195 686.4 703 51.1
Aqoxy5G01848 Aquilegia oxysepala HOM05D006558 ORTHO05D008424 3.0e-195 686.0 711 50.6
Peaxi162Scf00516g00328 Petunia axillaris HOM05D006558 ORTHO05D008424 3.9e-195 685.6 692 51.2
AUR62026839 Chenopodium quinoa HOM05D006558 ORTHO05D008424 8.6e-195 684.5 696 51.0
Sopen03g028230 Solanum pennellii HOM05D006558 ORTHO05D008424 6.2e-193 678.3 702 51.7
ECA248G1764 Erigeron canadensis HOM05D006558 ORTHO05D008424 6.8e-192 674.9 707 51.2
MBI13_g29518_MAGBIO Magnolia biondii HOM05D006558 ORTHO05D008424 6.8e-192 674.9 711 51.1
AT3G07530 Arabidopsis thaliana HOM05D006558 ORTHO05D008424 1.5e-191 673.7 707 49.5
Thhalv10020176m.g Eutrema salsugineum HOM05D006558 ORTHO05D008424 2.6e-191 672.9 713 49.1
Solyc03g097460.3 Solanum lycopersicum HOM05D006558 ORTHO05D008424 2.6e-191 672.9 698 51.7
EL10Ac2g02834 Beta vulgaris HOM05D006558 ORTHO05D009340 2.9e-190 669.5 694 50.4
Sp3g06440 Schrenkiella parvula HOM05D006558 ORTHO05D008424 2.9e-190 669.5 715 48.8
Aa31LG10G8390 Aethionema arabicum HOM05D006558 ORTHO05D008424 8.3e-190 667.9 708 49.7
THA.LOC104826716 Tarenaya hassleriana HOM05D006558 ORTHO05D008424 1.1e-189 667.5 710 50.6
SHI03978 Sapria himalayana HOM05D006558 ORTHO05D005892 1.1e-186 657.5 711 50.1
Lj9C648T3 Lonicera japonica HOM05D006558 ORTHO05D008424 9.5e-186 654.4 679 52.1
BraA05t22799Z Brassica rapa HOM05D006558 ORTHO05D008424 8.9e-184 647.9 715 47.6
Carub.0003s0708 Capsella rubella HOM05D006558 ORTHO05D008424 2.0e-183 646.7 715 48.5
Medtr3g019010 Medicago truncatula HOM05D006558 ORTHO05D008424 2.6e-183 646.4 532 65.2
BolC5t34633H Brassica oleracea HOM05D006558 ORTHO05D008424 1.3e-182 644.0 713 47.8
CAN.G732.14 Capsicum annuum HOM05D006558 ORTHO05D008424 1.7e-182 643.7 700 49.1
Nitab4.5_0002530g0080 Nicotiana tabacum HOM05D006558 ORTHO05D008424 1.1e-181 641.0 702 49.7
arahy.Tifrunner.gnm1.ann1.S73JQ5 Arachis hypogaea HOM05D006558 ORTHO05D008424 4.3e-178 629.0 551 59.2
Nitab4.5_0000021g1060 Nicotiana tabacum HOM05D006558 ORTHO05D008424 9.6e-178 627.9 734 47.3
C05p59790 Brassica napus HOM05D006558 ORTHO05D008424 8.1e-177 624.8 683 48.2
A05p40680 Brassica napus HOM05D006558 ORTHO05D008424 1.8e-176 623.6 683 48.0
BcaC05g29545 Brassica carinata HOM05D006558 ORTHO05D008424 9.9e-175 617.8 701 47.1
Lsat_1_v5_gn_1_114420 Lactuca sativa HOM05D006558 ORTHO05D008424 1.4e-173 614.0 697 47.2
Dinv00935 Davidia involucrata HOM05D006558 ORTHO05D008424 1.0e-171 607.8 590 54.4
DCAR_010372 Daucus carota HOM05D006558 ORTHO05D008424 4.3e-170 602.4 513 57.7
Atru.chr11.2434 Acer truncatum HOM05D006558 ORTHO05D008424 2.2e-166 590.1 459 63.2
Ah.10g030940 Amaranthus hybridus HOM05D006558 ORTHO05D008424 1.2e-164 584.3 606 50.5
HPP92_012099 Vanilla planifolia HOM05D006558 ORTHO05D008424 6.7e-155 552.0 699 43.9
PSO675G8563 Papaver somniferum HOM05D006558 ORTHO05D008424 8.7e-155 551.6 706 43.6
Migut.K00935 Erythranthe guttata HOM05D006558 ORTHO05D008424 2.5e-154 550.1 609 50.7
CARHR082190 Cardamine hirsuta HOM05D006558 ORTHO05D008424 4.0e-152 542.7 515 53.0
Thecc.10G170400 Theobroma cacao HOM05D006558 ORTHO05D008424 5.8e-151 538.9 446 60.3
Dinv09252 Davidia involucrata HOM05D006558 ORTHO05D008424 4.3e-146 522.7 539 52.9
Cpa.g.sc96.50 Carica papaya HOM05D006558 ORTHO05D008424 6.5e-142 508.8 448 57.6
MD00G1214500 Malus domestica HOM05D006558 ORTHO05D008424 2.7e-140 503.4 402 62.7
unitig_32.g11142 Utricularia gibba HOM05D006558 ORTHO05D008424 3.7e-137 493.0 619 44.9
Sabra01G0180400 Salix brachista HOM05D006558 ORTHO05D008424 1.9e-133 480.7 448 54.9
Hund15718 Selenicereus undatus HOM05D006558 ORTHO05D008424 7.0e-128 462.2 645 42.3
Gohir.A06G175900 Gossypium hirsutum HOM05D006558 ORTHO05D008424 1.7e-121 441.0 437 54.7
vmacro13739 Vaccinium macrocarpon HOM05D006558 ORTHO05D008424 1.4e-120 438.0 478 49.6
PGSC0003DMG400031735 Solanum tuberosum HOM05D006558 ORTHO05D008424 3.0e-115 420.2 495 48.3
ATR1093G023 Amborella trichopoda HOM05D006558 ORTHO05D008424 2.0e-111 407.5 545 40.6
CDE05G1491 Ceratophyllum demersum HOM05D006558 ORTHO05D008424 9.8e-98 362.1 667 35.2
Zm00001eb143980 Zea mays HOM05D006558 ORTHO05D008424 8.6e-94 349.0 497 38.4
AL908U10010 Arabidopsis lyrata HOM05D006558 ORTHO05D008424 3.6e-92 343.6 374 48.9
Mapoly0001s0524 Marchantia polymorpha HOM05D006558 ORTHO05D008424 3.1e-91 340.5 847 30.6
COL.COLO4_35437 Corchorus olitorius HOM05D006558 ORTHO05D008424 4.9e-89 333.2 591 36.2
AagrBONN_evm.TU.Sc2ySwM_228.965 Anthoceros agrestis HOM05D006558 ORTHO05D008424 2.0e-87 327.8 749 32.6
Gohir.A06G175902 Gossypium hirsutum HOM05D006558 ORTHO05D008424 1.7e-86 324.7 234 68.8
Pp3c9_4730 Physcomitrium patens HOM05D006558 ORTHO05D008424 5.8e-82 309.7 831 29.4
Eucgr.H05132 Eucalyptus grandis HOM05D006558 ORTHO05D008424 1.2e-76 292.0 697 32.4
MD07G1035100 Malus domestica HOM05D006558 ORTHO05D008424 1.7e-73 281.6 207 64.7
SMO144G0043 Selaginella moellendorffii HOM05D006558 ORTHO05D008424 2.2e-73 281.2 707 29.7
SMO229G0006 Selaginella moellendorffii HOM05D006558 ORTHO05D008424 3.7e-73 280.4 707 29.6
SEGI_06522 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 3.9e-70 270.4 386 40.2
Atru.chr11.2476 Acer truncatum HOM05D006558 ORTHO05D008424 7.3e-69 266.2 186 68.3
Eucgr.H05138 Eucalyptus grandis HOM05D006558 ORTHO05D008424 3.2e-48 197.6 318 39.9
SEGI_00327 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 8.1e-44 183.0 160 51.9
Cpa.g.sc96.48 Carica papaya HOM05D006558 ORTHO05D008424 6.9e-43 179.9 217 49.3
Eucgr.H05129 Eucalyptus grandis HOM05D006558 ORTHO05D008424 9.3e-40 169.5 146 56.8
Medtr3g019025 Medicago truncatula HOM05D006558 ORTHO05D008424 3.9e-38 164.1 89 85.4
Atru.chr11.2433 Acer truncatum HOM05D006558 ORTHO05D008424 1.4e-35 155.6 147 55.8
Cc02_g29630 Coffea canephora HOM05D006558 ORTHO05D008424 4.0e-35 154.1 129 54.3
CBR_g72661 Chara braunii HOM05D000019 ORTHO05D000353 7.4e-29 133.3 305 31.1
Os03g0243200 Oryza sativa ssp. japonica HOM05D006558 ORTHO05D008424 7.4e-29 133.3 190 40.5
DCAR_010374 Daucus carota HOM05D006558 ORTHO05D008424 1.3e-28 132.5 190 40.5
MD00G1214400 Malus domestica HOM05D006558 ORTHO05D008424 6.9e-27 126.7 109 56.9
SGA_v2.0_scaffold2G00943 Striga asiatica HOM05D006558 ORTHO05D008424 2.5e-24 118.2 191 41.4
Ca_02010_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 1.8e-22 112.1 59 86.4
SEGI_36037 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 1.5e-21 109.0 247 30.8
MD07G1035200 Malus domestica HOM05D006558 ORTHO05D008424 7.7e-18 96.7 133 38.3
Medtr3g019030 Medicago truncatula HOM05D006558 ORTHO05D034019 8.5e-17 93.2 53 75.5
CAN.G261.15 Capsicum annuum HOM05D003152 ORTHO05D034019 1.1e-13 82.8 66 53.0
Sopen05g017900 Solanum pennellii HOM05D028470 ORTHO05D037706 7.2e-08 63.5 90 42.2
Solyc05g150129.1 Solanum lycopersicum HOM05D006558 ORTHO05D008424 2.7e-07 61.6 65 47.7


User provided reference genes

Program Settings