Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G285300 Phaseolus vulgaris HOM05D007269 ORTHO05D008531 1.1e-105 386.7 205 100.0
VMungo0251G2992 Vigna mungo HOM05D031312 ORTHO05D008531 3.8e-58 228.8 162 79.6
Lalb_Chr07g0183561 Lupinus albus HOM05D007269 ORTHO05D008531 3.3e-54 215.7 206 61.2
Lj4g0016206 Lotus japonicus HOM05D007269 ORTHO05D008531 6.3e-53 211.5 210 59.5
Lalb_Chr13g0297191 Lupinus albus HOM05D007269 ORTHO05D008531 7.9e-48 194.5 208 57.2
TPR.G28777 Trifolium pratense HOM05D007269 ORTHO05D008531 3.9e-47 192.2 210 56.2
Psat7g036960 Pisum sativum HOM05D007269 ORTHO05D008531 1.7e-42 176.8 214 52.3
Medtr8g096640 Medicago truncatula HOM05D007269 ORTHO05D008531 2.2e-42 176.4 210 52.9
Glyma.05G203500 Glycine max HOM05D031312 ORTHO05D008531 1.6e-27 127.1 145 57.9
Potri.015G099800 Populus trichocarpa HOM05D007269 ORTHO05D008531 1.5e-25 120.6 201 38.8
arahy.Tifrunner.gnm1.ann1.0J46GK Arachis hypogaea HOM05D031312 ORTHO05D008531 1.2e-24 117.5 150 50.7
arahy.Tifrunner.gnm1.ann1.MRR6R9 Arachis hypogaea HOM05D031312 ORTHO05D008531 2.1e-24 116.7 148 51.4
Ciclev10032833m.g Citrus clementina HOM05D007269 ORTHO05D008531 8.0e-24 114.8 190 40.0
Potri.012G101800 Populus trichocarpa HOM05D007269 ORTHO05D008531 3.4e-22 109.4 200 39.0
QL10p002347 Quercus lobata HOM05D007269 ORTHO05D008531 4.4e-22 109.0 200 39.5
Sabra12G0074700 Salix brachista HOM05D001095 ORTHO05D000976 9.8e-22 107.8 200 40.0
Manes.14G048800 Manihot esculenta HOM05D007269 ORTHO05D008531 1.7e-21 107.1 209 38.3
Sabra15G0120500 Salix brachista HOM05D007269 ORTHO05D008531 2.2e-21 106.7 194 38.1
COL.COLO4_36213 Corchorus olitorius HOM05D007269 ORTHO05D008531 3.7e-21 105.9 201 37.3
CiPaw.11G004900 Carya illinoinensis HOM05D007269 ORTHO05D008531 4.8e-21 105.5 198 37.9
Duzib084G1105 Durio zibethinus HOM05D007269 ORTHO05D008531 3.1e-20 102.8 196 36.2
MD06G1137900 Malus domestica HOM05D007269 ORTHO05D008531 1.2e-19 100.9 213 36.2
Thecc.03G133000 Theobroma cacao HOM05D007269 ORTHO05D008531 3.5e-19 99.4 201 35.3
Duzib068G0517 Durio zibethinus HOM05D007269 ORTHO05D008531 5.9e-19 98.6 207 34.3
Aqoxy5G03286 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 5.0e-18 95.5 211 32.7
Atru.chr6.1845 Acer truncatum HOM05D007269 ORTHO05D008531 9.5e-17 91.3 191 37.2
CSS0016059 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 9.5e-17 91.3 221 36.2
Prupe.5G148200 Prunus persica HOM05D007269 ORTHO05D008531 6.1e-16 88.6 208 35.1
RcHm_v2.0_Chr7g0189701 Rosa chinensis HOM05D007269 ORTHO05D008531 2.3e-15 86.7 219 33.3
MD14G1153300 Malus domestica HOM05D007269 ORTHO05D008531 3.0e-15 86.3 212 33.0
Nn4g22252 Nelumbo nucifera HOM05D007269 ORTHO05D008531 3.0e-15 86.3 195 34.4
Aqoxy3G01626 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 6.8e-15 85.1 226 31.4
FAN13G1779 Fragaria x ananassa HOM05D007269 ORTHO05D008531 6.8e-15 85.1 215 33.5
FAN08G0669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 8.8e-15 84.7 217 33.2
HanXRQChr09g0273431 Helianthus annuus HOM05D007269 ORTHO05D008531 8.8e-15 84.7 191 33.0
FAN28G2669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 1.2e-14 84.3 216 34.7
Lsat_1_v5_gn_4_82360 Lactuca sativa HOM05D007269 ORTHO05D008531 1.2e-14 84.3 199 32.2
FvH4_5g08680 Fragaria vesca HOM05D007269 ORTHO05D008531 1.5e-14 84.0 216 34.7
FAN18G2199 Fragaria x ananassa HOM05D007269 ORTHO05D008531 1.5e-14 84.0 216 34.7
FAN06G3947 Fragaria x ananassa HOM05D007269 ORTHO05D008531 4.9e-13 79.0 216 34.7
Nn3g16393 Nelumbo nucifera HOM05D007269 ORTHO05D008531 4.9e-13 79.0 204 32.4
ATR0582G094 Amborella trichopoda HOM05D007269 ORTHO05D008531 1.1e-12 77.8 205 34.1
TAR374G0918 Trochodendron aralioides HOM05D007269 ORTHO05D008531 1.1e-12 77.8 113 40.7
Cc11_g17250 Coffea canephora HOM05D007269 ORTHO05D008531 1.4e-12 77.4 237 31.2
DCAR_021638 Daucus carota HOM05D007269 ORTHO05D008531 1.4e-12 77.4 238 32.4
PGR119G1209 Punica granatum HOM05D007269 ORTHO05D008531 3.1e-12 76.3 213 34.3
Cpa.g.sc4.165 Carica papaya HOM05D007269 ORTHO05D008531 1.2e-11 74.3 201 33.3
Gohir.A12G190800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 1.2e-11 74.3 192 33.3
DCAR_021637 Daucus carota HOM05D007269 ORTHO05D008531 2.0e-11 73.6 235 30.6
PSO017G6998 Papaver somniferum HOM05D007269 ORTHO05D008531 2.0e-11 73.6 212 29.7
Gohir.D12G192900 Gossypium hirsutum HOM05D007269 ORTHO05D008531 4.5e-11 72.4 204 33.8
Gorai.008G207700 Gossypium raimondii HOM05D007269 ORTHO05D008531 5.9e-11 72.0 199 33.2
Manes.12G008000 Manihot esculenta HOM05D007269 ORTHO05D008531 5.9e-11 72.0 219 32.9
Potri.001G059800 Populus trichocarpa HOM05D007269 ORTHO05D008531 7.8e-11 71.6 213 30.0
QL03p051584 Quercus lobata HOM05D007269 ORTHO05D008531 7.8e-11 71.6 227 29.5
CSS0011599 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 2.3e-10 70.1 199 29.1
Nitab4.5_0002530g0020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 2.9e-10 69.7 223 29.6
Thecc.02G201200 Theobroma cacao HOM05D007269 ORTHO05D008531 2.9e-10 69.7 246 29.7
Manes.13G008500 Manihot esculenta HOM05D007269 ORTHO05D008531 5.0e-10 68.9 223 31.8
Cfa018768 Carpinus fangiana HOM05D007269 ORTHO05D008531 6.6e-10 68.6 159 38.4
Dinv23173 Davidia involucrata HOM05D007269 ORTHO05D008531 8.6e-10 68.2 174 33.9
Haze_07172 Corylus avellana HOM05D007269 ORTHO05D008531 1.5e-09 67.4 161 37.3
CiPaw.06G105600 Carya illinoinensis HOM05D007269 ORTHO05D008531 1.9e-09 67.0 236 27.5
CiPaw.05G106700 Carya illinoinensis HOM05D007269 ORTHO05D008531 3.3e-09 66.2 241 27.8
MD16G1123500 Malus domestica HOM05D007269 ORTHO05D008531 4.3e-09 65.9 245 29.0
HanXRQChr05g0153821 Helianthus annuus HOM05D007269 ORTHO05D008531 5.6e-09 65.5 226 26.5
MBI07_g46909_MAGBIO Magnolia biondii HOM05D007269 ORTHO05D008531 7.3e-09 65.1 246 29.3
Solyc03g097430.1 Solanum lycopersicum HOM05D007269 ORTHO05D008531 9.5e-09 64.7 218 30.7
CAN.G732.21 Capsicum annuum HOM05D007269 ORTHO05D008531 2.1e-08 63.5 209 30.1
Ciclev10032794m.g Citrus clementina HOM05D007269 ORTHO05D008531 2.1e-08 63.5 205 33.7
Sopen03g028190 Solanum pennellii HOM05D007269 ORTHO05D008531 2.1e-08 63.5 207 28.0
HanXRQChr08g0236471 Helianthus annuus HOM05D007269 ORTHO05D008531 2.8e-08 63.2 215 26.0
PGSC0003DMG400026484 Solanum tuberosum HOM05D007269 ORTHO05D008531 3.6e-08 62.8 222 27.9
Nitab4.5_0000021g1020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 4.7e-08 62.4 230 28.3
Sc22g0003750 Simmondsia chinensis HOM05D007269 ORTHO05D008531 6.1e-08 62.0 188 30.9
Oeu001326.1 Olea europaea HOM05D007269 ORTHO05D008531 1.8e-07 60.5 197 28.9
Oeu001327.1 Olea europaea HOM05D007269 ORTHO05D008531 1.8e-07 60.5 197 28.9
RcHm_v2.0_Chr4g0429751 Rosa chinensis HOM05D007269 ORTHO05D008531 1.8e-07 60.5 229 27.5
MSTRG.7284 Avicennia marina HOM05D007269 ORTHO05D008531 4.0e-07 59.3 223 29.1
CANSAT01G1989 Cannabis sativa HOM05D007269 ORTHO05D008531 4.0e-07 59.3 224 25.0
Sabra03G0123300 Salix brachista HOM05D007269 ORTHO05D008531 8.9e-07 58.2 228 28.9
Migut.M01219 Erythranthe guttata HOM05D007269 ORTHO05D008531 3.4e-06 56.2 228 30.7
Rhsim12G0177300 Rhododendron simsii HOM05D007269 ORTHO05D008531 4.4e-06 55.8 230 27.0
FvH4_4g23360 Fragaria vesca HOM05D007269 ORTHO05D008531 5.7e-06 55.5 249 27.3
Gohir.A01G022800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 7.5e-06 55.1 168 28.0
THA.LOC104825024 Tarenaya hassleriana HOM05D012271 ORTHO05D014413 9.8e-06 54.7 189 31.7


User provided reference genes

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