Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G272500 Phaseolus vulgaris HOM05D002102 ORTHO05D029775 5.3e-90 334.3 169 100.0
VMungo0251G0427 Vigna mungo HOM05D002102 ORTHO05D029775 1.6e-70 269.6 191 78.0
Glyma.05G192200 Glycine max HOM05D002102 ORTHO05D029775 9.1e-58 227.3 190 71.1
Glyma.08G000500 Glycine max HOM05D012657 ORTHO05D029775 1.6e-57 226.5 192 70.8
VMungo0251G3352 Vigna mungo HOM05D002102 ORTHO05D004119 7.3e-15 84.7 109 45.9
Medtr8g070690 Medicago truncatula HOM05D002102 ORTHO05D004119 1.1e-13 80.9 100 48.0
Phvul.003G275300 Phaseolus vulgaris HOM05D002102 ORTHO05D004119 1.1e-13 80.9 115 44.3
Lj6g0016862 Lotus japonicus HOM05D002102 ORTHO05D004119 1.4e-13 80.5 265 31.3
Glyma.15G155100 Glycine max HOM05D002102 ORTHO05D004119 1.8e-13 80.1 257 30.7
Cfa001163 Carpinus fangiana HOM05D002102 ORTHO05D004119 4.0e-13 79.0 260 32.7
DCAR_004361 Daucus carota HOM05D002102 ORTHO05D004119 8.9e-13 77.8 109 40.4
Manes.16G059800 Manihot esculenta HOM05D002102 ORTHO05D004119 8.9e-13 77.8 87 46.0
Glyma.16G094200 Glycine max HOM05D002102 ORTHO05D004119 1.2e-12 77.4 108 46.3
QL11p010813 Quercus lobata HOM05D002102 ORTHO05D004119 1.2e-12 77.4 254 31.1
Ca_22533_v3 Cicer arietinum L. HOM05D002102 ORTHO05D004119 2.0e-12 76.6 95 49.5
TWI15G0700 Tripterygium wilfordii HOM05D002102 ORTHO05D004119 2.6e-12 76.3 132 41.7
Cpa.g.sc1291.1 Carica papaya HOM05D002102 ORTHO05D004119 3.4e-12 75.9 112 41.1
Psat1g152040 Pisum sativum HOM05D002102 ORTHO05D004119 7.5e-12 74.7 102 49.0
Lalb_Chr05g0229071 Lupinus albus HOM05D002102 ORTHO05D004119 1.3e-11 73.9 217 32.3
TWI63G0772 Tripterygium wilfordii HOM05D002102 ORTHO05D004119 1.3e-11 73.9 114 42.1
Glyma.09G047700 Glycine max HOM05D002102 ORTHO05D004119 1.7e-11 73.6 124 43.5
Psat0s2609g0080 Pisum sativum HOM05D002102 ORTHO05D004119 1.7e-11 73.6 93 47.3
Phvul.009G245100 Phaseolus vulgaris HOM05D002102 ORTHO05D004119 2.2e-11 73.2 248 29.8
Lalb_Chr20g0114391 Lupinus albus HOM05D002102 ORTHO05D004119 2.9e-11 72.8 121 40.5
CiPaw.09G140500 Carya illinoinensis HOM05D002102 ORTHO05D004119 4.9e-11 72.0 253 30.0
PGR042G1552 Punica granatum HOM05D002102 ORTHO05D004119 4.9e-11 72.0 128 37.5
Medtr2g437600 Medicago truncatula HOM05D002102 ORTHO05D004119 6.4e-11 71.6 84 48.8
Potri.001G074300 Populus trichocarpa HOM05D002102 ORTHO05D004119 6.4e-11 71.6 113 39.8
Sabra01G0052600 Salix brachista HOM05D002102 ORTHO05D004119 6.4e-11 71.6 87 46.0
Haze_05189 Corylus avellana HOM05D002102 ORTHO05D004119 1.1e-10 70.9 261 31.8
TPR.G19830 Trifolium pratense HOM05D002102 ORTHO05D004119 1.4e-10 70.5 121 40.5
TPR.G28833 Trifolium pratense HOM05D002102 ORTHO05D004119 1.4e-10 70.5 84 47.6
arahy.Tifrunner.gnm1.ann1.G5LJZZ Arachis hypogaea HOM05D002102 ORTHO05D004119 1.9e-10 70.1 98 43.9
arahy.Tifrunner.gnm1.ann1.K04KZH Arachis hypogaea HOM05D002102 ORTHO05D004119 1.9e-10 70.1 98 44.9
Peaxi162Scf00313g00049 Petunia axillaris HOM05D002102 ORTHO05D004119 1.9e-10 70.1 85 44.7
TAR629G0218 Trochodendron aralioides HOM05D002102 ORTHO05D004119 1.9e-10 70.1 87 47.1
TPR.G749 Trifolium pratense HOM05D002102 ORTHO05D004119 2.4e-10 69.7 84 47.6
Dinv17885 Davidia involucrata HOM05D002102 ORTHO05D008242 3.2e-10 69.3 257 30.0
Glyma.15G155200 Glycine max HOM05D012657 ORTHO05D015609 4.1e-10 68.9 129 39.5
Nitab4.5_0001299g0100 Nicotiana tabacum HOM05D002102 ORTHO05D008242 4.1e-10 68.9 123 39.0
PGSC0003DMG400011261 Solanum tuberosum HOM05D002102 ORTHO05D004119 5.4e-10 68.6 108 38.9
Lj4g0021437 Lotus japonicus HOM05D002102 ORTHO05D004119 7.1e-10 68.2 84 51.2
Thecc.01G106700 Theobroma cacao HOM05D002102 ORTHO05D004119 7.1e-10 68.2 116 39.7
Nitab4.5_0012748g0010 Nicotiana tabacum HOM05D002102 ORTHO05D004119 9.2e-10 67.8 84 46.4
DCAR_001256 Daucus carota HOM05D002102 ORTHO05D008242 1.2e-09 67.4 111 36.9
VMungo1309G0754 Vigna mungo HOM05D002102 ORTHO05D004119 1.6e-09 67.0 111 42.3
Aqoxy1G01356 Aquilegia oxysepala HOM05D002102 ORTHO05D004119 2.1e-09 66.6 90 44.4
Ciclev10015737m.g Citrus clementina HOM05D002102 ORTHO05D004119 2.1e-09 66.6 85 49.4
COL.COLO4_03689 Corchorus olitorius HOM05D002102 ORTHO05D004119 2.1e-09 66.6 127 38.6
Aa31LG6G2610 Aethionema arabicum HOM05D002102 ORTHO05D004119 3.5e-09 65.9 135 37.8
Ca_02410_v3 Cicer arietinum L. HOM05D002102 ORTHO05D004119 4.6e-09 65.5 104 41.3
HanXRQChr14g0439021 Helianthus annuus HOM05D002102 ORTHO05D004119 4.6e-09 65.5 110 44.5
Sopen10g001180 Solanum pennellii HOM05D002102 ORTHO05D004119 4.6e-09 65.5 107 39.3
MD05G1242700 Malus domestica HOM05D002102 ORTHO05D004119 6.0e-09 65.1 88 47.7
Glyma.09G047800 Glycine max HOM05D012657 ORTHO05D015609 7.8e-09 64.7 127 37.8
Hma1.2p1_0166F.1_g073520 Hydrangea macrophylla HOM05D002102 ORTHO05D004119 7.8e-09 64.7 129 39.5
Potri.003G156700 Populus trichocarpa HOM05D002102 ORTHO05D004119 7.8e-09 64.7 113 37.2
Prupe.4G120700 Prunus persica HOM05D002102 ORTHO05D004119 7.8e-09 64.7 125 40.0
MBI02_g17885_MAGBIO Magnolia biondii HOM05D002102 ORTHO05D004119 1.3e-08 63.9 88 42.0
THA.LOC104811927 Tarenaya hassleriana HOM05D002102 ORTHO05D004119 1.7e-08 63.5 135 34.1
Actinidia34699 Actinidia chinensis HOM05D002102 ORTHO05D004119 2.3e-08 63.2 101 40.6
Phvul.009G245000 Phaseolus vulgaris HOM05D012657 ORTHO05D015609 2.3e-08 63.2 109 44.0
ECA238G3437 Erigeron canadensis HOM05D002102 ORTHO05D004119 3.0e-08 62.8 91 47.3
RcHm_v2.0_Chr5g0021811 Rosa chinensis HOM05D002102 ORTHO05D004119 3.0e-08 62.8 191 32.5
BcaC09g51330 Brassica carinata HOM05D002102 ORTHO05D004119 3.9e-08 62.4 115 39.1
BolC1t01381H Brassica oleracea HOM05D002102 ORTHO05D004119 3.9e-08 62.4 115 39.1
Cc09_g04630 Coffea canephora HOM05D002102 ORTHO05D004119 5.1e-08 62.0 102 41.2
Medtr2g437610 Medicago truncatula HOM05D012657 ORTHO05D015609 5.1e-08 62.0 77 46.8
Solyc10g005190.1 Solanum lycopersicum HOM05D002102 ORTHO05D004119 5.1e-08 62.0 102 39.2
Eucgr.E04329 Eucalyptus grandis HOM05D002102 ORTHO05D004119 6.6e-08 61.6 96 39.6
Lalb_Chr20g0114381 Lupinus albus HOM05D012657 ORTHO05D015609 6.6e-08 61.6 95 42.1
A01p11930 Brassica napus HOM05D002102 ORTHO05D004119 8.6e-08 61.2 115 36.5
C01p14170 Brassica napus HOM05D002102 ORTHO05D004119 8.6e-08 61.2 115 39.1
BraA01t01135Z Brassica rapa HOM05D002102 ORTHO05D004119 8.6e-08 61.2 115 36.5
Ca_02411_v3 Cicer arietinum L. HOM05D012657 ORTHO05D015609 8.6e-08 61.2 80 43.8
Lalb_Chr18g0051891 Lupinus albus HOM05D002102 ORTHO05D004119 8.6e-08 61.2 102 42.2
FAN25G3128 Fragaria x ananassa HOM05D002102 ORTHO05D008242 1.1e-07 60.8 192 32.8
HanXRQChr02g0036451 Helianthus annuus HOM05D002102 ORTHO05D004119 1.1e-07 60.8 90 41.1
Lsat_1_v5_gn_9_100101 Lactuca sativa HOM05D002102 ORTHO05D004119 1.5e-07 60.5 91 44.0
Sp4g17210 Schrenkiella parvula HOM05D002102 ORTHO05D004119 1.5e-07 60.5 170 31.2
VMungo1309G2785 Vigna mungo HOM05D012657 ORTHO05D015609 1.5e-07 60.5 91 48.4
BcaNung03712 Brassica carinata HOM05D002102 ORTHO05D004119 1.9e-07 60.1 97 37.1
BcaNung03713 Brassica carinata HOM05D002102 ORTHO05D004119 1.9e-07 60.1 97 37.1
FvH4_3g13340 Fragaria vesca HOM05D002102 ORTHO05D004119 1.9e-07 60.1 132 37.9
FAN11G2372 Fragaria x ananassa HOM05D002102 ORTHO05D008242 1.9e-07 60.1 132 37.9
Gohir.D03G044000 Gossypium hirsutum HOM05D002102 ORTHO05D004119 1.9e-07 60.1 240 28.8
MD10G1224500 Malus domestica HOM05D002102 ORTHO05D004119 1.9e-07 60.1 135 38.5
Carub.0004s1659 Capsella rubella HOM05D002102 ORTHO05D004119 2.5e-07 59.7 169 32.0
Peaxi162Scf00036g00224 Petunia axillaris HOM05D002102 ORTHO05D004119 2.5e-07 59.7 93 41.9
ECA246G4308 Erigeron canadensis HOM05D002102 ORTHO05D004119 4.3e-07 58.9 90 41.1
Thhalv10027261m.g Eutrema salsugineum HOM05D002102 ORTHO05D004119 4.3e-07 58.9 137 32.8
Lsat_1_v5_gn_2_59800 Lactuca sativa HOM05D002102 ORTHO05D004119 4.3e-07 58.9 86 45.3
Medtr2g437620 Medicago truncatula HOM05D012657 ORTHO05D015609 4.3e-07 58.9 77 46.8
AL7G33650 Arabidopsis lyrata HOM05D002102 ORTHO05D004119 5.6e-07 58.5 97 39.2
AT4G20190 Arabidopsis thaliana HOM05D002102 ORTHO05D004119 5.6e-07 58.5 97 39.2
BcaC02g07749 Brassica carinata HOM05D002102 ORTHO05D004119 5.6e-07 58.5 150 32.0
BolC4t27882H Brassica oleracea HOM05D002102 ORTHO05D004119 5.6e-07 58.5 150 32.0
FAN21G2948 Fragaria x ananassa HOM05D002102 ORTHO05D008242 5.6e-07 58.5 192 32.3
Gohir.A02G132600 Gossypium hirsutum HOM05D002102 ORTHO05D004119 5.6e-07 58.5 240 29.6
Gorai.003G045000 Gossypium raimondii HOM05D002102 ORTHO05D004119 5.6e-07 58.5 240 29.2
Oeu025642.1 Olea europaea HOM05D002102 ORTHO05D004119 5.6e-07 58.5 102 35.3
FAN16G2960 Fragaria x ananassa HOM05D002102 ORTHO05D008242 7.3e-07 58.2 192 32.3
Psat1g151800 Pisum sativum HOM05D012657 ORTHO05D015609 7.3e-07 58.2 104 42.3
BcaC01g00659 Brassica carinata HOM05D002102 ORTHO05D004119 9.5e-07 57.8 114 35.1
Nitab4.5_0001815g0140 Nicotiana tabacum HOM05D002102 ORTHO05D004119 9.5e-07 57.8 91 39.6
Nitab4.5_0007687g0030 Nicotiana tabacum HOM05D002102 ORTHO05D004119 9.5e-07 57.8 91 39.6
Aa31LG9G8520 Aethionema arabicum HOM05D002102 ORTHO05D008242 1.2e-06 57.4 249 26.5
BcaB06g28826 Brassica carinata HOM05D002102 ORTHO05D004119 1.2e-06 57.4 109 34.9
BcaC07g37800 Brassica carinata HOM05D002102 ORTHO05D004119 1.2e-06 57.4 139 31.7
BolC8t48191H Brassica oleracea HOM05D002102 ORTHO05D004119 1.2e-06 57.4 139 31.7
BraA08t33092Z Brassica rapa HOM05D002102 ORTHO05D004119 1.2e-06 57.4 100 38.0
Carub.0007s2095 Capsella rubella HOM05D002102 ORTHO05D004119 1.2e-06 57.4 97 39.2
CARHR129060 Cardamine hirsuta HOM05D002102 ORTHO05D004119 1.2e-06 57.4 140 34.3
CARHR227010 Cardamine hirsuta HOM05D002102 ORTHO05D004119 1.2e-06 57.4 97 39.2
MELO3C002390.2 Cucumis melo HOM05D002102 ORTHO05D004119 1.2e-06 57.4 112 40.2
C03p82830 Brassica napus HOM05D002102 ORTHO05D004119 1.6e-06 57.0 114 32.5
BolC3t20564H Brassica oleracea HOM05D002102 ORTHO05D004119 1.6e-06 57.0 114 32.5
A08p14680 Brassica napus HOM05D002102 ORTHO05D004119 2.1e-06 56.6 97 38.1
BraA08t33455Z Brassica rapa HOM05D002102 ORTHO05D004119 2.1e-06 56.6 97 38.1
CANSAT35G1778 Cannabis sativa HOM05D002102 ORTHO05D004119 2.8e-06 56.2 88 44.3
BcaB03g11661 Brassica carinata HOM05D002102 ORTHO05D004119 3.6e-06 55.8 97 38.1
Sp7g18610 Schrenkiella parvula HOM05D002102 ORTHO05D004119 3.6e-06 55.8 97 37.1
PSO541G6086 Papaver somniferum HOM05D002102 ORTHO05D004119 4.7e-06 55.5 108 33.3
PSO675G5300 Papaver somniferum HOM05D002102 ORTHO05D004119 4.7e-06 55.5 108 33.3
Sc17g0004360 Simmondsia chinensis HOM05D002102 ORTHO05D004119 6.2e-06 55.1 137 32.1
THA.LOC104798573 Tarenaya hassleriana HOM05D002102 ORTHO05D004119 6.2e-06 55.1 138 32.6
C04p64060 Brassica napus HOM05D002102 ORTHO05D004119 8.1e-06 54.7 109 33.9


User provided reference genes

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