Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G271900 Phaseolus vulgaris HOM05D008093 ORTHO05D009840 1.6e-71 272.7 142 100.0
VMungo0251G0054 Vigna mungo HOM05D008093 ORTHO05D009840 2.4e-43 179.1 107 90.7
Glyma.05G191500 Glycine max HOM05D008093 ORTHO05D009840 4.7e-39 164.9 106 84.9
Lj4g0016515 Lotus japonicus HOM05D008093 ORTHO05D009840 1.7e-28 129.8 116 63.8
arahy.Tifrunner.gnm1.ann1.IYM9ZI Arachis hypogaea HOM05D008093 ORTHO05D009840 1.1e-27 127.1 109 65.1
Lalb_Chr07g0184461 Lupinus albus HOM05D008093 ORTHO05D009840 1.8e-27 126.3 106 64.2
Glyma.08G156600 Glycine max HOM05D008093 ORTHO05D009840 1.6e-26 123.2 106 70.8
Medtr8g093620 Medicago truncatula HOM05D008093 ORTHO05D009840 1.9e-24 116.3 108 65.7
Ca_17640_v3 Cicer arietinum L. HOM05D008093 ORTHO05D009840 3.6e-23 112.1 109 63.3
Psat7g045640 Pisum sativum HOM05D008093 ORTHO05D009840 3.6e-23 112.1 99 63.6
Lalb_Chr12g0203141 Lupinus albus HOM05D008093 ORTHO05D009840 6.1e-23 111.3 107 60.7
COL.COLO4_35729 Corchorus olitorius HOM05D008093 ORTHO05D009840 1.2e-15 87.0 100 51.0
Hma1.2p1_0476F.1_g160900 Hydrangea macrophylla HOM05D008093 ORTHO05D009840 1.2e-15 87.0 98 57.1
Solyc11g005930.2 Solanum lycopersicum HOM05D008093 ORTHO05D009840 3.6e-15 85.5 101 49.5
Sopen11g001870 Solanum pennellii HOM05D008093 ORTHO05D009840 4.7e-15 85.1 101 49.5
Nitab4.5_0013695g0010 Nicotiana tabacum HOM05D008093 ORTHO05D009840 6.1e-15 84.7 101 50.5
PGSC0003DMG400028663 Solanum tuberosum HOM05D008093 ORTHO05D009840 8.0e-15 84.3 101 48.5
Peaxi162Scf00589g00323 Petunia axillaris HOM05D008093 ORTHO05D009840 1.4e-14 83.6 101 48.5
Dinv24346 Davidia involucrata HOM05D008093 ORTHO05D009840 1.8e-14 83.2 104 51.0
Nitab4.5_0002667g0080 Nicotiana tabacum HOM05D008093 ORTHO05D009840 3.0e-14 82.4 101 50.5
QL06p028766 Quercus lobata HOM05D008093 ORTHO05D009840 3.0e-14 82.4 100 54.0
Nn5g28574 Nelumbo nucifera HOM05D008093 ORTHO05D009840 5.2e-14 81.6 105 51.4
Oeu033661.1 Olea europaea HOM05D008093 ORTHO05D009840 5.2e-14 81.6 108 48.1
FvH4_1g13550 Fragaria vesca HOM05D008093 ORTHO05D009840 8.9e-14 80.9 101 47.5
FAN26G1298 Fragaria x ananassa HOM05D008093 ORTHO05D009840 8.9e-14 80.9 101 47.5
Nitab4.5_0000856g0010 Nicotiana tabacum HOM05D008093 ORTHO05D009840 1.2e-13 80.5 101 50.5
RcHm_v2.0_Chr2g0101941 Rosa chinensis HOM05D008093 ORTHO05D009840 1.5e-13 80.1 97 48.5
Oeu042288.1 Olea europaea HOM05D008093 ORTHO05D009840 2.0e-13 79.7 105 45.7
CsaV3_2G018270 Cucumis sativus L. HOM05D008093 ORTHO05D009840 4.4e-13 78.6 103 47.6
FAN28G2095 Fragaria x ananassa HOM05D008093 ORTHO05D009840 4.4e-13 78.6 101 46.5
arahy.Tifrunner.gnm1.ann1.Y5JHNR Arachis hypogaea HOM05D008093 ORTHO05D009840 5.7e-13 78.2 51 76.5
Gohir.A05G385600 Gossypium hirsutum HOM05D008093 ORTHO05D009840 5.7e-13 78.2 120 45.0
Manes.12G154600 Manihot esculenta HOM05D008093 ORTHO05D009840 5.7e-13 78.2 96 51.0
Thecc.01G130900 Theobroma cacao HOM05D008093 ORTHO05D009840 1.3e-12 77.0 101 47.5
Gorai.012G034100 Gossypium raimondii HOM05D008093 ORTHO05D009840 1.7e-12 76.6 75 57.3
Actinidia06628 Actinidia chinensis HOM05D008093 ORTHO05D009840 2.2e-12 76.3 102 45.1
Duzib264G0739 Durio zibethinus HOM05D008093 ORTHO05D009840 2.2e-12 76.3 100 48.0
FAN23G2512 Fragaria x ananassa HOM05D008093 ORTHO05D009840 2.2e-12 76.3 54 68.5
Cfa002886 Carpinus fangiana HOM05D008093 ORTHO05D009840 2.8e-12 75.9 108 45.4
CiPaw.04G083000 Carya illinoinensis HOM05D008093 ORTHO05D009840 2.8e-12 75.9 112 46.4
Cc07_g18370 Coffea canephora HOM05D008093 ORTHO05D009840 3.7e-12 75.5 104 46.2
MELO3C023245.2 Cucumis melo HOM05D008093 ORTHO05D009840 4.9e-12 75.1 99 47.5
Gohir.D04G022800 Gossypium hirsutum HOM05D008093 ORTHO05D009840 4.9e-12 75.1 75 56.0
FAN19G1201 Fragaria x ananassa HOM05D008093 ORTHO05D009840 6.3e-12 74.7 54 68.5
Potri.007G109200 Populus trichocarpa HOM05D008093 ORTHO05D009840 6.3e-12 74.7 98 43.9
ClCG02G000540 Citrullus lanatus HOM05D008093 ORTHO05D009840 8.3e-12 74.3 98 46.9
MD02G1150700 Malus domestica HOM05D008093 ORTHO05D009840 1.4e-11 73.6 105 49.5
Potri.005G058800 Populus trichocarpa HOM05D008093 ORTHO05D009840 1.8e-11 73.2 104 47.1
MD15G1265300 Malus domestica HOM05D008093 ORTHO05D009840 2.4e-11 72.8 105 42.9
AUR62006838 Chenopodium quinoa HOM05D008093 ORTHO05D009840 3.1e-11 72.4 53 66.0
QL06p028768 Quercus lobata HOM05D008093 ORTHO05D009840 4.1e-11 72.0 58 63.8
Sc09g0002370 Simmondsia chinensis HOM05D008093 ORTHO05D009840 5.4e-11 71.6 106 46.2
CiPaw.04G083200 Carya illinoinensis HOM05D008093 ORTHO05D009840 7.0e-11 71.2 103 45.6
Nitab4.5_0002667g0090 Nicotiana tabacum HOM05D008093 ORTHO05D009840 7.0e-11 71.2 103 44.7
MBI06_g29669_MAGBIO Magnolia biondii HOM05D008093 ORTHO05D009840 1.2e-10 70.5 54 68.5
Sed0027082 Sechium edule HOM05D008093 ORTHO05D009840 1.2e-10 70.5 94 46.8
MBI03_g00424_MAGBIO Magnolia biondii HOM05D008093 ORTHO05D009840 1.6e-10 70.1 96 45.8
THA.LOC104819498 Tarenaya hassleriana HOM05D010996 ORTHO05D009840 2.0e-10 69.7 98 43.9
EL10Ac4g09593 Beta vulgaris HOM05D008093 ORTHO05D009840 4.5e-10 68.6 104 38.5
Ciclev10002949m.g Citrus clementina HOM05D008093 ORTHO05D009840 7.8e-10 67.8 98 41.8
Os12g0187800 Oryza sativa ssp. japonica HOM05D008093 ORTHO05D009840 1.7e-09 66.6 70 50.0
ATR1136G205 Amborella trichopoda HOM05D008093 ORTHO05D009840 3.8e-09 65.5 96 43.8
Zm00001eb409100 Zea mays HOM05D008093 ORTHO05D009840 1.5e-08 63.5 48 64.6
Eucgr.L03270 Eucalyptus grandis HOM05D008093 ORTHO05D009840 4.3e-08 62.0 63 49.2
Zm00001eb138530 Zea mays HOM05D008093 ORTHO05D009840 7.3e-08 61.2 46 63.0
Prupe.7G152300 Prunus persica HOM05D008093 ORTHO05D009840 9.5e-08 60.8 91 47.3
SEGI_35585 Sequoiadendron giganteum HOM05D008072 ORTHO05D010204 9.5e-08 60.8 47 66.0
Aqoxy5G02237 Aquilegia oxysepala HOM05D008093 ORTHO05D009840 1.6e-07 60.1 101 41.6
CARHR241540 Cardamine hirsuta HOM05D010996 ORTHO05D009840 6.1e-07 58.2 111 38.7
GSVIVG01026494001 Vitis vinifera HOM05D008093 ORTHO05D009840 1.8e-06 56.6 88 40.9
AT4G33467 Arabidopsis thaliana HOM05D010996 ORTHO05D009840 2.3e-06 56.2 104 40.4
A03p62020 Brassica napus HOM05D010996 ORTHO05D009840 4.0e-06 55.5 98 40.8
BraA03t15242Z Brassica rapa HOM05D010996 ORTHO05D009840 4.0e-06 55.5 98 40.8
Thhalv10026675m.g Eutrema salsugineum HOM05D010996 ORTHO05D009840 4.0e-06 55.5 103 41.7
Eucgr.H04961 Eucalyptus grandis HOM05D008093 ORTHO05D009840 6.8e-06 54.7 54 50.0


User provided reference genes

Program Settings