Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G269400 Phaseolus vulgaris HOM05D005188 ORTHO05D006153 4.1e-90 334.7 171 100.0
VMungo0251G2948 Vigna mungo HOM05D005188 ORTHO05D006153 4.0e-85 318.2 172 93.6
Cfa002897 Carpinus fangiana HOM05D005188 ORTHO05D006153 9.5e-71 270.4 176 80.1
ClCG01G015380 Citrullus lanatus HOM05D005188 ORTHO05D006153 9.5e-71 270.4 173 79.8
Haze_25240 Corylus avellana HOM05D005188 ORTHO05D006153 1.6e-70 269.6 176 79.5
MELO3C008060.2 Cucumis melo HOM05D005188 ORTHO05D006153 2.1e-70 269.2 173 79.2
Lalb_Chr13g0296451 Lupinus albus HOM05D005188 ORTHO05D006153 2.1e-70 269.2 176 78.4
CsaV3_6G041600 Cucumis sativus L. HOM05D005188 ORTHO05D006153 6.1e-70 267.7 173 79.2
CiPaw.03G121400 Carya illinoinensis HOM05D005188 ORTHO05D006153 2.3e-69 265.8 176 79.0
Medtr3g095540 Medicago truncatula HOM05D005188 ORTHO05D006153 5.2e-69 264.6 174 77.6
TPR.G18740 Trifolium pratense HOM05D005188 ORTHO05D006153 7.5e-68 260.8 174 76.4
Potri.005G063300 Populus trichocarpa HOM05D005188 ORTHO05D006153 9.8e-68 260.4 175 77.7
Sabra05G0052500 Salix brachista HOM05D005188 ORTHO05D006153 1.3e-67 260.0 175 77.7
CANSAT01G0911 Cannabis sativa HOM05D005188 ORTHO05D006153 6.4e-67 257.7 173 76.9
QL02p001672 Quercus lobata HOM05D005188 ORTHO05D006153 8.3e-67 257.3 175 77.7
Potri.007G105900 Populus trichocarpa HOM05D005188 ORTHO05D006153 1.9e-66 256.1 175 77.1
Lj1g0024625 Lotus japonicus HOM05D005188 ORTHO05D006153 2.4e-66 255.8 173 77.5
Cpa.g.sc3.345 Carica papaya HOM05D005188 ORTHO05D006153 3.2e-66 255.4 177 72.9
Thecc.01G132900 Theobroma cacao HOM05D005188 ORTHO05D006153 5.4e-66 254.6 176 76.1
TWI75G0084 Tripterygium wilfordii HOM05D005188 ORTHO05D006153 1.2e-65 253.4 171 75.4
Psat5g063680 Pisum sativum HOM05D005188 ORTHO05D006153 1.6e-65 253.1 172 75.6
Lj4g0001203 Lotus japonicus HOM05D005188 ORTHO05D006153 2.7e-65 252.3 172 77.9
Glyma.06G150300 Glycine max HOM05D005188 ORTHO05D006153 3.5e-65 251.9 173 77.5
TWI79G1553 Tripterygium wilfordii HOM05D005188 ORTHO05D006153 3.5e-65 251.9 171 75.4
Glyma.04G215800 Glycine max HOM05D005188 ORTHO05D006153 7.8e-65 250.8 174 78.7
COL.COLO4_35748 Corchorus olitorius HOM05D005188 ORTHO05D006153 1.0e-64 250.4 175 77.1
TAR381G0300 Trochodendron aralioides HOM05D005188 ORTHO05D006153 1.0e-64 250.4 176 76.1
MBI06_g39404_MAGBIO Magnolia biondii HOM05D005188 ORTHO05D006153 1.7e-64 249.6 174 75.3
Gohir.A11G226800 Gossypium hirsutum HOM05D005188 ORTHO05D006153 2.3e-64 249.2 177 75.1
Gohir.D11G230800 Gossypium hirsutum HOM05D005188 ORTHO05D006153 2.3e-64 249.2 177 75.1
Ca_16917_v3 Cicer arietinum L. HOM05D005188 ORTHO05D006153 3.0e-64 248.8 176 75.6
Gohir.A05G384500 Gossypium hirsutum HOM05D005188 ORTHO05D006153 3.9e-64 248.4 176 76.1
CiPaw.04G081900 Carya illinoinensis HOM05D005188 ORTHO05D006153 5.0e-64 248.1 177 72.9
Migut.H00702 Erythranthe guttata HOM05D005188 ORTHO05D006153 6.6e-64 247.7 171 73.1
Gorai.012G035200 Gossypium raimondii HOM05D005188 ORTHO05D006153 1.9e-63 246.1 176 76.1
Manes.12G156000 Manihot esculenta HOM05D005188 ORTHO05D006153 7.3e-63 244.2 175 72.6
Nn2g12180 Nelumbo nucifera HOM05D005188 ORTHO05D006153 1.2e-62 243.4 175 74.9
Gorai.003G066700 Gossypium raimondii HOM05D005188 ORTHO05D006153 2.8e-62 242.3 184 72.3
MSTRG.2649 Avicennia marina HOM05D005188 ORTHO05D006153 4.7e-62 241.5 170 72.9
Oeu037826.1 Olea europaea HOM05D005188 ORTHO05D006153 4.0e-61 238.4 171 70.2
Ciclev10002687m.g Citrus clementina HOM05D005188 ORTHO05D006153 2.6e-60 235.7 175 70.9
Dinv24366 Davidia involucrata HOM05D005188 ORTHO05D006153 3.4e-60 235.3 176 71.0
Cc10_g12590 Coffea canephora HOM05D005188 ORTHO05D006153 5.8e-60 234.6 176 73.3
Aqoxy5G02315 Aquilegia oxysepala HOM05D005188 ORTHO05D006153 7.5e-60 234.2 174 70.7
CDE08G0648 Ceratophyllum demersum HOM05D005188 ORTHO05D006153 7.5e-60 234.2 176 71.6
CAN.G792.16 Capsicum annuum HOM05D005188 ORTHO05D006153 1.3e-59 233.4 175 73.7
Hma1.2p1_0476F.1_g160790 Hydrangea macrophylla HOM05D005188 ORTHO05D006153 1.3e-59 233.4 177 70.6
Sabra07G0086700 Salix brachista HOM05D005188 ORTHO05D006153 1.7e-59 233.0 175 72.0
PGR008G0006 Punica granatum HOM05D005188 ORTHO05D006153 2.2e-59 232.6 173 71.1
PGR119G0239 Punica granatum HOM05D005188 ORTHO05D006153 2.2e-59 232.6 173 71.1
Lj2A607T35 Lonicera japonica HOM05D005188 ORTHO05D006153 2.9e-59 232.3 174 70.1
Prupe.4G271200 Prunus persica HOM05D005188 ORTHO05D006153 4.9e-59 231.5 176 72.2
arahy.Tifrunner.gnm1.ann1.DJM1RY Arachis hypogaea HOM05D005188 ORTHO05D006153 1.4e-58 229.9 180 72.2
arahy.Tifrunner.gnm1.ann1.V5WWJ8 Arachis hypogaea HOM05D005188 ORTHO05D006153 1.9e-58 229.6 180 72.2
SalBow1G2748 Salvia bowleyana HOM05D005188 ORTHO05D006153 1.9e-58 229.6 171 71.9
SGA_v2.0_scaffold370G50114 Striga asiatica HOM05D005188 ORTHO05D006153 1.9e-58 229.6 171 70.2
Aa31LG1G17870 Aethionema arabicum HOM05D005188 ORTHO05D006153 4.1e-58 228.4 174 70.1
CDE02G4401 Ceratophyllum demersum HOM05D005188 ORTHO05D006153 4.1e-58 228.4 176 71.0
MD15G1441800 Malus domestica HOM05D005188 ORTHO05D006153 4.1e-58 228.4 174 71.3
CSS0010064 Camellia sinensis var. sinensis HOM05D005188 ORTHO05D006153 2.1e-57 226.1 179 70.4
CSS0045275 Camellia sinensis var. sinensis HOM05D005188 ORTHO05D006153 2.1e-57 226.1 179 70.4
Sed0019160 Sechium edule HOM05D005188 ORTHO05D006153 2.1e-57 226.1 177 68.9
FvH4_1g24360 Fragaria vesca HOM05D005188 ORTHO05D006153 3.5e-57 225.3 176 71.0
FAN19G1208 Fragaria x ananassa HOM05D005188 ORTHO05D006153 3.5e-57 225.3 176 71.0
unitig_899.g14682 Utricularia gibba HOM05D005188 ORTHO05D006153 1.0e-56 223.8 172 68.6
MD01G1004300 Malus domestica HOM05D005188 ORTHO05D006153 1.7e-56 223.0 174 69.5
FAN28G1395 Fragaria x ananassa HOM05D002517 ORTHO05D003040 2.3e-56 222.6 174 70.7
Actinidia06616 Actinidia chinensis HOM05D005188 ORTHO05D006153 3.0e-56 222.2 174 68.4
Peaxi162Scf01257g00019 Petunia axillaris HOM05D005188 ORTHO05D006153 3.0e-56 222.2 182 65.9
CARHR277950 Cardamine hirsuta HOM05D005188 ORTHO05D006153 5.1e-56 221.5 173 67.1
AT5G64040 Arabidopsis thaliana HOM05D005188 ORTHO05D006153 6.6e-56 221.1 174 67.2
Sp2g27110 Schrenkiella parvula HOM05D005188 ORTHO05D006153 6.6e-56 221.1 173 67.1
MBI06_g27435_MAGBIO Magnolia biondii HOM05D005188 ORTHO05D006153 8.6e-56 220.7 151 76.2
Hund23270 Selenicereus undatus HOM05D005188 ORTHO05D006153 1.9e-55 219.5 178 66.9
Carub.0008s2482 Capsella rubella HOM05D005188 ORTHO05D006153 3.3e-55 218.8 174 66.1
Solyc08g013670.3 Solanum lycopersicum HOM05D005188 ORTHO05D006153 3.3e-55 218.8 173 70.5
PGSC0003DMG400005805 Solanum tuberosum HOM05D005188 ORTHO05D006153 3.3e-55 218.8 178 69.7
AL8G41300 Arabidopsis lyrata HOM05D005188 ORTHO05D006153 4.3e-55 218.4 174 66.7
Sopen08g004510 Solanum pennellii HOM05D005188 ORTHO05D006153 4.3e-55 218.4 172 70.9
Sed0010246 Sechium edule HOM05D005188 ORTHO05D006153 1.6e-54 216.5 174 67.8
MBI03_g42548_MAGBIO Magnolia biondii HOM05D005188 ORTHO05D006153 2.1e-54 216.1 176 66.5
BcaB02g09793 Brassica carinata HOM05D005188 ORTHO05D006153 2.8e-54 215.7 173 65.3
FAN26G2437 Fragaria x ananassa HOM05D002517 ORTHO05D006153 2.8e-54 215.7 176 69.9
Ah.02g121530 Amaranthus hybridus HOM05D005188 ORTHO05D006153 3.6e-54 215.3 172 65.7
BcaC01g02658 Brassica carinata HOM05D005188 ORTHO05D006153 3.6e-54 215.3 173 65.3
BcaC01g02659 Brassica carinata HOM05D005188 ORTHO05D006153 3.6e-54 215.3 173 65.3
Thhalv10005005m.g Eutrema salsugineum HOM05D005188 ORTHO05D006153 3.6e-54 215.3 173 65.3
AUR62017881 Chenopodium quinoa HOM05D005188 ORTHO05D006153 4.7e-54 214.9 174 66.7
BcaB07g29717 Brassica carinata HOM05D005188 ORTHO05D006153 8.1e-54 214.2 173 67.1
C09p09640 Brassica napus HOM05D005188 ORTHO05D006153 8.1e-54 214.2 173 67.6
HanXRQChr04g0107551 Helianthus annuus HOM05D005188 ORTHO05D006153 8.1e-54 214.2 173 66.5
Lsat_1_v5_gn_1_10061 Lactuca sativa HOM05D005188 ORTHO05D006153 8.1e-54 214.2 178 65.2
RcHm_v2.0_Chr2g0120891 Rosa chinensis HOM05D005188 ORTHO05D006153 8.1e-54 214.2 176 67.6
Nitab4.5_0000673g0170 Nicotiana tabacum HOM05D005188 ORTHO05D006153 2.3e-53 212.6 176 68.8
A06p30750 Brassica napus HOM05D005188 ORTHO05D006153 4.0e-53 211.8 173 64.7
DCAR_001211 Daucus carota HOM05D005188 ORTHO05D006153 4.0e-53 211.8 177 63.8
PSO541G2775 Papaver somniferum HOM05D005188 ORTHO05D006153 5.2e-53 211.5 174 63.2
C02p63110 Brassica napus HOM05D005188 ORTHO05D006153 8.9e-53 210.7 173 65.9
BolC2t12383H Brassica oleracea HOM05D005188 ORTHO05D006153 8.9e-53 210.7 173 65.9
BcaC03g18240 Brassica carinata HOM05D005188 ORTHO05D006153 1.5e-52 209.9 173 65.9
HPP92_019391 Vanilla planifolia HOM05D005188 ORTHO05D006153 2.6e-52 209.1 173 65.9
ECA247G1960 Erigeron canadensis HOM05D005188 ORTHO05D006153 3.4e-52 208.8 169 64.5
ATR0987G005 Amborella trichopoda HOM05D005188 ORTHO05D006153 7.6e-52 207.6 179 63.7
PSO675G9377 Papaver somniferum HOM05D005188 ORTHO05D006153 1.3e-51 206.8 174 62.1
BolC9t53875H Brassica oleracea HOM05D005188 ORTHO05D006153 6.4e-51 204.5 184 63.0
Rhsim10G0133700 Rhododendron simsii HOM05D005188 ORTHO05D006153 8.3e-51 204.1 180 66.7
GSVIVG01026478001 Vitis vinifera HOM05D005188 ORTHO05D006153 8.3e-51 204.1 171 63.7
vmacro12795 Vaccinium macrocarpon HOM05D005188 ORTHO05D006153 1.2e-49 200.3 179 62.0
Atru.chr4.905 Acer truncatum HOM05D005188 ORTHO05D006153 4.6e-49 198.4 173 64.2
THA.LOC104800083 Tarenaya hassleriana HOM05D005188 ORTHO05D006153 6.0e-49 198.0 175 61.1
EL10Ac6g15302 Beta vulgaris HOM05D005188 ORTHO05D006153 5.6e-47 191.4 129 74.4
BolC3t18491H Brassica oleracea HOM05D005188 ORTHO05D006153 3.6e-46 188.7 177 59.3
Duzib264G0557 Durio zibethinus HOM05D005188 ORTHO05D006153 2.4e-45 186.0 147 72.8
Os12g0189400 Oryza sativa ssp. japonica HOM05D005188 ORTHO05D006153 5.2e-45 184.9 143 67.8
Zm00001eb138650 Zea mays HOM05D005188 ORTHO05D006153 1.2e-44 183.7 143 65.7
Oeu050119.1 Olea europaea HOM05D005188 ORTHO05D006153 2.0e-44 183.0 171 56.7
Zm00001eb409220 Zea mays HOM05D005188 ORTHO05D006153 2.9e-43 179.1 143 65.0
Eucgr.I00200 Eucalyptus grandis HOM05D005188 ORTHO05D006153 3.8e-43 178.7 148 69.6
Duzib147G0711 Durio zibethinus HOM05D005188 ORTHO05D006153 6.4e-43 177.9 147 72.1
A09p08510 Brassica napus HOM05D005188 ORTHO05D006153 3.2e-42 175.6 173 59.0
BraA09t36500Z Brassica rapa HOM05D005188 ORTHO05D006153 3.2e-42 175.6 173 59.0
SEGI_16120 Sequoiadendron giganteum HOM05D005188 ORTHO05D006153 1.2e-36 157.1 167 52.7
Sc16g0003820 Simmondsia chinensis HOM05D005188 ORTHO05D006153 2.0e-36 156.4 143 64.3
C03p62290 Brassica napus HOM05D005188 ORTHO05D006153 7.6e-36 154.5 143 60.8
BraA06t26017Z Brassica rapa HOM05D005188 ORTHO05D006153 8.4e-35 151.0 143 60.1
Duzib187G0538 Durio zibethinus HOM05D005188 ORTHO05D006153 8.4e-35 151.0 130 71.5
SMO144G0055 Selaginella moellendorffii HOM05D005188 ORTHO05D006153 1.0e-32 144.1 82 79.3
BcaB04g17222 Brassica carinata HOM05D005188 ORTHO05D006153 1.1e-29 134.0 122 58.2
BcaB08g36594 Brassica carinata HOM05D005188 ORTHO05D006153 1.2e-28 130.6 74 82.4
BolC2t07163H Brassica oleracea HOM05D005188 ORTHO05D006153 2.6e-28 129.4 74 81.1
BolC7t41311H Brassica oleracea HOM05D005188 ORTHO05D006153 2.6e-28 129.4 72 83.3
BcaC04g18786 Brassica carinata HOM05D005188 ORTHO05D006153 1.3e-27 127.1 74 79.7
AUR62003566 Chenopodium quinoa HOM05D005188 ORTHO05D006153 1.9e-23 113.2 173 45.7
Mapoly0116s0042 Marchantia polymorpha HOM05D005188 ORTHO05D006153 3.3e-23 112.5 164 40.9
Nn5g28540 Nelumbo nucifera HOM05D005188 ORTHO05D006153 1.8e-21 106.7 104 64.4
Cre02.g082500 Chlamydomonas reinhardtii HOM05D005188 ORTHO05D006153 5.8e-20 101.7 128 45.3
BcaC03g13890 Brassica carinata HOM05D005188 ORTHO05D006153 2.2e-19 99.8 74 64.9
AagrBONN_evm.TU.Sc2ySwM_362.2803 Anthoceros agrestis HOM05D005188 ORTHO05D006153 4.9e-19 98.6 87 62.1
Nitab4.5_0005544g0070 Nicotiana tabacum HOM05D005188 ORTHO05D006153 1.1e-15 87.4 112 55.4
CBR_g45633 Chara braunii HOM05D005188 ORTHO05D006153 1.3e-14 84.0 82 56.1
PRCOL_00004565 Prasinoderma coloniale HOM05D005188 ORTHO05D006153 4.8e-14 82.0 83 53.0
BraA02t09233Z Brassica rapa HOM05D005188 ORTHO05D006153 6.2e-14 81.6 116 50.9
Gohir.D04G031000 Gossypium hirsutum HOM05D006465 ORTHO05D008207 6.2e-14 81.6 111 54.1
MCO09G058 Micromonas commoda HOM05D005188 ORTHO05D006153 2.4e-13 79.7 140 38.6
A02p43130 Brassica napus HOM05D005188 ORTHO05D006153 1.9e-10 70.1 101 49.5
C02p10930 Brassica napus HOM05D005188 ORTHO05D006153 1.1e-07 60.8 30 83.3


User provided reference genes

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