Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G269100 Phaseolus vulgaris HOM05D006928 ORTHO05D008618 7.1e-44 180.3 94 100.0
Glyma.08G146400 Glycine max HOM05D006928 ORTHO05D008618 2.8e-40 168.3 94 91.5
Glyma.05G188300 Glycine max HOM05D006928 ORTHO05D008618 1.1e-39 166.4 94 91.5
Lj4g0006915 Lotus japonicus HOM05D006928 ORTHO05D008618 1.1e-39 166.4 94 88.3
Psat7g048720 Pisum sativum HOM05D006928 ORTHO05D008618 1.7e-37 159.1 94 85.1
RcHm_v2.0_Chr2g0119151 Rosa chinensis HOM05D006928 ORTHO05D008618 1.7e-37 159.1 94 86.2
TPR.G2179 Trifolium pratense HOM05D006928 ORTHO05D008618 1.7e-37 159.1 94 85.1
Sabra16G0195000 Salix brachista HOM05D006928 ORTHO05D008618 2.9e-37 158.3 94 84.0
Cfa002868 Carpinus fangiana HOM05D006928 ORTHO05D008618 3.8e-37 157.9 94 83.0
Lalb_Chr12g0203321 Lupinus albus HOM05D006928 ORTHO05D008618 1.9e-36 155.6 91 86.8
Potri.001G309200 Populus trichocarpa HOM05D006928 ORTHO05D008618 3.2e-36 154.8 94 84.0
Manes.12G150300 Manihot esculenta HOM05D006928 ORTHO05D008618 7.1e-36 153.7 94 80.9
COL.COLO4_22417 Corchorus olitorius HOM05D006928 ORTHO05D008618 1.2e-35 152.9 94 80.9
FAN23G1796 Fragaria x ananassa HOM05D006928 ORTHO05D008618 1.2e-35 152.9 94 83.0
FAN28G2803 Fragaria x ananassa HOM05D006928 ORTHO05D008618 1.2e-35 152.9 94 83.0
Gohir.A02G138100 Gossypium hirsutum HOM05D006928 ORTHO05D008618 1.2e-35 152.9 94 81.9
Gohir.D03G048800 Gossypium hirsutum HOM05D006928 ORTHO05D008618 1.2e-35 152.9 94 81.9
Gorai.003G050100 Gossypium raimondii HOM05D006928 ORTHO05D008618 1.2e-35 152.9 94 81.9
Eucgr.I00245 Eucalyptus grandis HOM05D006928 ORTHO05D008618 2.7e-35 151.8 94 81.9
FvH4_1g23590 Fragaria vesca HOM05D006928 ORTHO05D008618 2.7e-35 151.8 94 81.9
FAN19G2906 Fragaria x ananassa HOM05D006928 ORTHO05D008618 2.7e-35 151.8 94 81.9
GSVIVG01026587001 Vitis vinifera HOM05D006928 ORTHO05D008618 2.7e-35 151.8 94 79.8
Dinv09934 Davidia involucrata HOM05D006928 ORTHO05D008618 4.6e-35 151.0 94 78.7
MD15G1343100 Malus domestica HOM05D006928 ORTHO05D008618 7.9e-35 150.2 94 78.7
PGR119G2472 Punica granatum HOM05D006928 ORTHO05D008618 7.9e-35 150.2 93 79.6
Sed0020530 Sechium edule HOM05D006928 ORTHO05D008618 7.9e-35 150.2 93 78.5
Duzib264G0933 Durio zibethinus HOM05D006928 ORTHO05D008618 1.0e-34 149.8 94 79.8
Prupe.6G162900 Prunus persica HOM05D006928 ORTHO05D008618 1.0e-34 149.8 94 77.7
Atru.chr4.541 Acer truncatum HOM05D006928 ORTHO05D008618 1.3e-34 149.4 94 79.8
ClCG02G000690 Citrullus lanatus HOM05D006928 ORTHO05D008618 1.3e-34 149.4 93 78.5
Actinidia17615 Actinidia chinensis HOM05D006928 ORTHO05D008618 2.3e-34 148.7 94 78.7
CiPaw.04G083900 Carya illinoinensis HOM05D006928 ORTHO05D008618 2.3e-34 148.7 94 77.7
Aqoxy3G02632 Aquilegia oxysepala HOM05D006928 ORTHO05D008618 3.0e-34 148.3 92 78.3
Ciclev10026852m.g Citrus clementina HOM05D006928 ORTHO05D008618 3.9e-34 147.9 94 80.9
CSS0007569 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 6.7e-34 147.1 88 81.8
CSS0018620 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 6.7e-34 147.1 88 81.8
Cc00_g00790 Coffea canephora HOM05D006928 ORTHO05D008618 6.7e-34 147.1 94 78.7
Cc07_g17360 Coffea canephora HOM05D006928 ORTHO05D008618 6.7e-34 147.1 94 78.7
Hund03424 Selenicereus undatus HOM05D006928 ORTHO05D008618 6.7e-34 147.1 89 80.9
Thecc.01G120800 Theobroma cacao HOM05D006928 ORTHO05D008618 8.7e-34 146.7 88 80.7
AUR62003624 Chenopodium quinoa HOM05D006928 ORTHO05D008618 1.1e-33 146.4 94 78.7
CsaV3_2G018080 Cucumis sativus L. HOM05D006928 ORTHO05D008618 1.1e-33 146.4 93 76.3
Peaxi162Scf00025g02217 Petunia axillaris HOM05D006928 ORTHO05D008618 1.1e-33 146.4 94 79.8
Nitab4.5_0010284g0020 Nicotiana tabacum HOM05D006928 ORTHO05D008618 2.5e-33 145.2 94 77.7
PSO541G1601 Papaver somniferum HOM05D006928 ORTHO05D008618 2.5e-33 145.2 94 78.7
Duzib187G1761 Durio zibethinus HOM05D006928 ORTHO05D008618 3.3e-33 144.8 94 75.5
CANSAT01G1375 Cannabis sativa HOM05D006928 ORTHO05D008618 4.3e-33 144.4 94 76.6
MBI09_g18622_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 5.6e-33 144.1 94 75.5
MBI09_g20115_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 5.6e-33 144.1 94 75.5
Sc16g0003960 Simmondsia chinensis HOM05D006928 ORTHO05D008618 5.6e-33 144.1 93 77.4
TAR381G0700 Trochodendron aralioides HOM05D006928 ORTHO05D008618 5.6e-33 144.1 89 77.5
AL8G42110 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 1.3e-32 142.9 81 86.4
EL10Ac6g15253 Beta vulgaris HOM05D006928 ORTHO05D008618 1.3e-32 142.9 94 75.5
PSO675G6866 Papaver somniferum HOM05D006928 ORTHO05D008618 1.3e-32 142.9 94 77.7
Nn1g06098 Nelumbo nucifera HOM05D006928 ORTHO05D008618 1.6e-32 142.5 86 77.9
Nitab4.5_0002064g0030 Nicotiana tabacum HOM05D006928 ORTHO05D008618 1.6e-32 142.5 94 75.5
THA.LOC104818466 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 3.7e-32 141.4 86 81.4
MSTRG.2691 Avicennia marina HOM05D006928 ORTHO05D008618 6.2e-32 140.6 92 79.3
Thhalv10005190m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 6.2e-32 140.6 81 85.2
TWI75G0630 Tripterygium wilfordii HOM05D006928 ORTHO05D008618 6.2e-32 140.6 94 76.6
BcaB04g19985 Brassica carinata HOM05D006928 ORTHO05D008618 1.1e-31 139.8 80 86.2
BraA09t36529Z Brassica rapa HOM05D006928 ORTHO05D008618 1.1e-31 139.8 80 86.2
Sp2g27750 Schrenkiella parvula HOM05D006928 ORTHO05D008618 1.1e-31 139.8 85 82.4
Aa31LG1G17250 Aethionema arabicum HOM05D006928 ORTHO05D008618 1.4e-31 139.4 85 81.2
THA.LOC104799431 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 1.4e-31 139.4 86 81.4
Sp6g33580 Schrenkiella parvula HOM05D006928 ORTHO05D008618 1.8e-31 139.0 86 80.2
CARHR278670 Cardamine hirsuta HOM05D006928 ORTHO05D008618 2.4e-31 138.7 81 84.0
Solyc11g005360.2 Solanum lycopersicum HOM05D006928 ORTHO05D008618 4.0e-31 137.9 90 77.8
Sopen11g001370 Solanum pennellii HOM05D006928 ORTHO05D008618 4.0e-31 137.9 90 77.8
BolC9t53907H Brassica oleracea HOM05D006928 ORTHO05D008618 5.3e-31 137.5 91 75.8
DCAR_027258 Daucus carota HOM05D006928 ORTHO05D008618 1.2e-30 136.3 93 76.3
HanXRQChr15g0471661 Helianthus annuus HOM05D006928 ORTHO05D008618 1.2e-30 136.3 94 70.2
Carub.0008s2549 Capsella rubella HOM05D006928 ORTHO05D008618 2.6e-30 135.2 89 75.3
Thhalv10015138m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 4.5e-30 134.4 86 77.9
ECA238G4197 Erigeron canadensis HOM05D006928 ORTHO05D008618 5.8e-30 134.0 91 73.6
AL6G20240 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 1.7e-29 132.5 79 82.3
AT5G09830 Arabidopsis thaliana HOM05D006928 ORTHO05D008618 2.9e-29 131.7 79 82.3
Lsat_1_v5_gn_2_66720 Lactuca sativa HOM05D006928 ORTHO05D008618 2.9e-29 131.7 88 73.9
Carub.0006s0825 Capsella rubella HOM05D006928 ORTHO05D008618 3.8e-29 131.3 83 78.3
CDE12G0365 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 3.8e-29 131.3 93 69.9
BcaB08g37169 Brassica carinata HOM05D006928 ORTHO05D008618 4.9e-29 131.0 84 78.6
BcaC04g23298 Brassica carinata HOM05D006928 ORTHO05D008618 4.9e-29 131.0 100 70.0
A10p27630 Brassica napus HOM05D006928 ORTHO05D008618 4.9e-29 131.0 84 78.6
C09p67690 Brassica napus HOM05D006928 ORTHO05D008618 4.9e-29 131.0 84 78.6
BolC9t59531H Brassica oleracea HOM05D006928 ORTHO05D008618 4.9e-29 131.0 84 78.6
SMO351G0462 Selaginella moellendorffii HOM05D006928 ORTHO05D008618 1.1e-28 129.8 94 68.1
BraA10t44815Z Brassica rapa HOM05D006928 ORTHO05D008618 1.4e-28 129.4 84 77.4
Migut.H01113 Erythranthe guttata HOM05D006928 ORTHO05D008618 2.5e-28 128.6 83 75.9
Haze_25197 Corylus avellana HOM05D006928 ORTHO05D008618 3.2e-28 128.3 159 48.4
Pp3c4_15580 Physcomitrium patens HOM05D006928 ORTHO05D008618 7.1e-28 127.1 93 67.7
Medtr8g092690 Medicago truncatula HOM05D006928 ORTHO05D008618 1.2e-27 126.3 73 87.7
QL06p051863 Quercus lobata HOM05D006928 ORTHO05D008618 2.7e-27 125.2 75 82.7
HPP92_027450 Vanilla planifolia HOM05D006928 ORTHO05D008618 4.6e-27 124.4 86 72.1
Haze_25192 Corylus avellana HOM05D006928 ORTHO05D008618 6.0e-27 124.0 74 82.4
Haze_25196 Corylus avellana HOM05D006928 ORTHO05D008618 1.8e-26 122.5 73 82.2
AagrBONN_evm.TU.Sc2ySwM_344.3776 Anthoceros agrestis HOM05D006928 ORTHO05D008618 2.3e-26 122.1 91 64.8
CDE04G1901 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 3.9e-26 121.3 98 65.3
Rhsim08G0003500 Rhododendron simsii HOM05D002612 ORTHO05D008618 1.1e-25 119.8 76 81.6
Actinidia26282 Actinidia chinensis HOM05D006928 ORTHO05D008618 2.5e-25 118.6 80 73.8
AUR62017933 Chenopodium quinoa HOM05D006928 ORTHO05D008618 4.3e-25 117.9 73 82.2
Ah.03g146570 Amaranthus hybridus HOM05D006928 ORTHO05D008618 5.6e-25 117.5 73 79.5
Mapoly0023s0156 Marchantia polymorpha HOM05D006928 ORTHO05D008618 5.6e-25 117.5 94 63.8
TAR376G0498 Trochodendron aralioides HOM05D006928 ORTHO05D008618 2.1e-24 115.5 77 75.3
C09p09990 Brassica napus HOM05D006928 ORTHO05D008618 4.8e-24 114.4 94 66.0
Cpa.g.sc1003.1 Carica papaya HOM05D006928 ORTHO05D008618 1.4e-23 112.8 73 76.7
CAN.G249.11 Capsicum annuum HOM05D006928 ORTHO05D008618 3.1e-23 111.7 73 78.1
Zm00001eb146740 Zea mays HOM05D006928 ORTHO05D008618 3.1e-23 111.7 85 64.7
SGA_v2.0_scaffold137G35109 Striga asiatica HOM05D006928 ORTHO05D008618 1.5e-22 109.4 69 78.3
CARHR203570 Cardamine hirsuta HOM05D006928 ORTHO05D008618 2.6e-22 108.6 71 76.1
unitig_0.g37 Utricularia gibba HOM05D006928 ORTHO05D008618 7.6e-22 107.1 66 80.3
SalBow1G8150 Salvia bowleyana HOM05D006928 ORTHO05D008618 2.9e-21 105.1 74 74.3
CBR_g19927 Chara braunii HOM05D006928 ORTHO05D008618 8.4e-21 103.6 80 67.5
BcaB08g37178 Brassica carinata HOM05D006928 ORTHO05D008618 3.0e-18 95.1 84 60.7
SEGI_33222 Sequoiadendron giganteum HOM05D006928 ORTHO05D008618 1.3e-16 89.7 108 50.9
Cre03.g164550 Chlamydomonas reinhardtii HOM05D006928 ORTHO05D008618 2.2e-16 89.0 79 57.0
Os01g0866600 Oryza sativa ssp. japonica HOM05D006928 ORTHO05D008618 3.7e-16 88.2 63 69.8


User provided reference genes

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