Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G266500 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 4.9e-61 237.7 122 100.0
VMungo1080G0444 Vigna mungo HOM05D006253 ORTHO05D007666 1.1e-49 199.9 111 91.9
Phvul.005G182700 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 8.0e-48 193.7 111 89.2
Lj6g0019810 Lotus japonicus HOM05D006253 ORTHO05D007666 5.2e-47 191.0 111 87.4
arahy.Tifrunner.gnm1.ann1.1E2X9I Arachis hypogaea HOM05D006253 ORTHO05D007666 2.0e-46 189.1 111 85.6
arahy.Tifrunner.gnm1.ann1.ETD7FQ Arachis hypogaea HOM05D006253 ORTHO05D007666 5.8e-46 187.6 111 84.7
arahy.Tifrunner.gnm1.ann1.5N1458 Arachis hypogaea HOM05D006253 ORTHO05D007666 2.9e-45 185.3 111 83.8
TPR.G19494 Trifolium pratense HOM05D006253 ORTHO05D007666 8.3e-45 183.7 109 85.3
Duzib052G0633 Durio zibethinus HOM05D006253 ORTHO05D007666 1.1e-44 183.3 111 80.2
Potri.004G141400 Populus trichocarpa HOM05D006253 ORTHO05D007666 1.1e-44 183.3 111 82.9
Thecc.02G100600 Theobroma cacao HOM05D006253 ORTHO05D007666 1.9e-44 182.6 110 81.8
TPR.G19178 Trifolium pratense HOM05D006253 ORTHO05D007666 2.4e-44 182.2 110 84.5
Glyma.04G194000 Glycine max HOM05D006253 ORTHO05D007666 3.2e-44 181.8 111 86.5
Gohir.A01G006900 Gossypium hirsutum HOM05D006253 ORTHO05D007666 3.2e-44 181.8 111 80.2
Gohir.D01G007000 Gossypium hirsutum HOM05D006253 ORTHO05D007666 4.1e-44 181.4 111 80.2
Gorai.002G008000 Gossypium raimondii HOM05D006253 ORTHO05D007666 4.1e-44 181.4 111 80.2
Psat5g098280 Pisum sativum HOM05D006253 ORTHO05D007666 5.4e-44 181.0 111 82.9
CiPaw.05G006400 Carya illinoinensis HOM05D006253 ORTHO05D007666 7.1e-44 180.6 111 82.0
Lalb_Chr25g0286231 Lupinus albus HOM05D006253 ORTHO05D007666 7.1e-44 180.6 111 82.9
Sabra04G0093200 Salix brachista HOM05D006253 ORTHO05D007666 1.2e-43 179.9 111 82.0
arahy.Tifrunner.gnm1.ann1.AJN977 Arachis hypogaea HOM05D006253 ORTHO05D007666 1.6e-43 179.5 111 81.1
Ciclev10029390m.g Citrus clementina HOM05D006253 ORTHO05D007666 1.6e-43 179.5 111 79.3
QL11p035967 Quercus lobata HOM05D006253 ORTHO05D007666 2.7e-43 178.7 110 80.9
COL.COLO4_32658 Corchorus olitorius HOM05D006253 ORTHO05D007666 3.5e-43 178.3 111 80.2
Medtr8g099835 Medicago truncatula HOM05D006253 ORTHO05D007666 3.5e-43 178.3 111 83.8
TAR376G0695 Trochodendron aralioides HOM05D006253 ORTHO05D007666 6.0e-43 177.6 111 79.3
Ca_01013_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 1.3e-42 176.4 111 82.0
Manes.01G064000 Manihot esculenta HOM05D006253 ORTHO05D007666 5.1e-42 174.5 111 79.3
Sed0021593 Sechium edule HOM05D006253 ORTHO05D007666 5.1e-42 174.5 111 79.3
Hma1.2p1_0370F.1_g137800 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 6.6e-42 174.1 111 80.2
Actinidia12952 Actinidia chinensis HOM05D006253 ORTHO05D007666 1.1e-41 173.3 111 78.4
Ca_15796_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 1.1e-41 173.3 111 81.1
Ca_30406_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 1.1e-41 173.3 111 81.1
RcHm_v2.0_Chr6g0257111 Rosa chinensis HOM05D006253 ORTHO05D007666 1.5e-41 172.9 113 79.6
Sc14g0002650 Simmondsia chinensis HOM05D006253 ORTHO05D007666 1.9e-41 172.6 111 80.2
Eucgr.I01155 Eucalyptus grandis HOM05D006253 ORTHO05D007666 7.3e-41 170.6 111 78.4
FvH4_2g06110 Fragaria vesca HOM05D006253 ORTHO05D007666 7.3e-41 170.6 113 77.9
FAN24G2487 Fragaria x ananassa HOM05D006253 ORTHO05D007666 7.3e-41 170.6 113 77.9
THA.LOC104807358 Tarenaya hassleriana HOM05D006253 ORTHO05D007666 1.2e-40 169.9 111 78.4
Nn5g30328 Nelumbo nucifera HOM05D006253 ORTHO05D007666 2.1e-40 169.1 111 75.7
Prupe.8G124200 Prunus persica HOM05D006253 ORTHO05D007666 2.8e-40 168.7 113 76.1
Solyc01g108260.4 Solanum lycopersicum HOM05D006253 ORTHO05D007666 3.6e-40 168.3 111 77.5
Lsat_1_v5_gn_5_112681 Lactuca sativa HOM05D006253 ORTHO05D007666 4.7e-40 167.9 111 76.6
Lj5C209T13 Lonicera japonica HOM05D006253 ORTHO05D007666 4.7e-40 167.9 111 74.8
MD05G1080500 Malus domestica HOM05D006253 ORTHO05D007666 4.7e-40 167.9 112 76.8
Rhsim03G0192100 Rhododendron simsii HOM05D006253 ORTHO05D007666 4.7e-40 167.9 111 75.7
MBI02_g02992_MAGBIO Magnolia biondii HOM05D006253 ORTHO05D007666 6.2e-40 167.5 111 74.8
GSVIVG01031749001 Vitis vinifera HOM05D006253 ORTHO05D007666 6.2e-40 167.5 111 73.9
CARHR242350 Cardamine hirsuta HOM05D006253 ORTHO05D007666 8.1e-40 167.2 111 75.7
PGR142G1116 Punica granatum HOM05D006253 ORTHO05D007666 8.1e-40 167.2 111 74.8
Oeu010588.1 Olea europaea HOM05D006253 ORTHO05D007666 1.1e-39 166.8 111 76.6
Sed0027718 Sechium edule HOM05D006253 ORTHO05D007666 1.1e-39 166.8 111 76.6
AT4G34412 Arabidopsis thaliana HOM05D006253 ORTHO05D007666 1.4e-39 166.4 111 75.7
HanXRQChr16g0501301 Helianthus annuus HOM05D006253 ORTHO05D007666 1.4e-39 166.4 111 74.8
CAN.G1041.15 Capsicum annuum HOM05D006253 ORTHO05D007666 1.8e-39 166.0 111 77.5
FAN27G3246 Fragaria x ananassa HOM05D006253 ORTHO05D007666 2.3e-39 165.6 119 72.3
TWI79G0152 Tripterygium wilfordii HOM05D006253 ORTHO05D007666 2.3e-39 165.6 111 74.8
Carub.0007s0590 Capsella rubella HOM05D006253 ORTHO05D007666 5.2e-39 164.5 111 73.9
Sopen01g050480 Solanum pennellii HOM05D006253 ORTHO05D007666 5.2e-39 164.5 111 76.6
Os01g0142200 Oryza sativa ssp. japonica HOM05D006253 ORTHO05D007666 8.9e-39 163.7 111 77.5
Sp7g32200 Schrenkiella parvula HOM05D006253 ORTHO05D007666 8.9e-39 163.7 111 74.8
A01p04020 Brassica napus HOM05D006253 ORTHO05D007666 1.2e-38 163.3 111 74.8
BraA03t15367Z Brassica rapa HOM05D006253 ORTHO05D007666 1.2e-38 163.3 111 74.8
CANSAT25G0326 Cannabis sativa HOM05D006253 ORTHO05D007666 1.2e-38 163.3 111 75.7
MSTRG.27724 Avicennia marina HOM05D006253 ORTHO05D007666 1.5e-38 162.9 111 73.0
MELO3C019508.2 Cucumis melo HOM05D006253 ORTHO05D007666 1.5e-38 162.9 111 74.8
AL7G16840 Arabidopsis lyrata HOM05D006253 ORTHO05D007666 2.0e-38 162.5 111 74.8
BcaNung06978 Brassica carinata HOM05D006253 ORTHO05D007666 2.0e-38 162.5 111 73.9
ECA234G4670 Erigeron canadensis HOM05D006253 ORTHO05D007666 2.0e-38 162.5 111 73.0
SGA_v2.0_scaffold22G09667 Striga asiatica HOM05D006253 ORTHO05D007666 2.0e-38 162.5 111 73.0
C07p60590 Brassica napus HOM05D006253 ORTHO05D007666 2.6e-38 162.2 111 73.9
BolC7t46489H Brassica oleracea HOM05D003825 ORTHO05D004491 2.6e-38 162.2 111 73.9
PSO478G4849 Papaver somniferum HOM05D006253 ORTHO05D007666 2.6e-38 162.2 111 73.9
Rhsim05G0084000 Rhododendron simsii HOM05D006253 ORTHO05D007666 2.6e-38 162.2 120 70.8
PGSC0003DMG400025894 Solanum tuberosum HOM05D006253 ORTHO05D007666 2.6e-38 162.2 111 75.7
Thhalv10026394m.g Eutrema salsugineum HOM05D006253 ORTHO05D007666 4.4e-38 161.4 111 72.1
HanXRQChr10g0319791 Helianthus annuus HOM05D006253 ORTHO05D007666 4.4e-38 161.4 111 73.9
CANSAT35G0887 Cannabis sativa HOM05D006253 ORTHO05D007666 9.9e-38 160.2 111 74.8
Zm00001eb124670 Zea mays HOM05D006253 ORTHO05D007666 1.3e-37 159.8 111 74.8
CsaV3_3G018580 Cucumis sativus L. HOM05D006253 ORTHO05D007666 1.7e-37 159.5 111 73.0
EL10Ac5g11497 Beta vulgaris HOM05D006253 ORTHO05D007666 3.7e-37 158.3 111 73.9
Aa31LG2G16330 Aethionema arabicum HOM05D006253 ORTHO05D007666 8.3e-37 157.1 111 73.0
PSO782G1871 Papaver somniferum HOM05D006253 ORTHO05D007666 2.4e-36 155.6 106 73.6
DCAR_007862 Daucus carota HOM05D006253 ORTHO05D007666 9.2e-36 153.7 111 69.4
HPP92_001047 Vanilla planifolia HOM05D006253 ORTHO05D007666 1.0e-34 150.2 111 69.4
Mapoly0083s0082 Marchantia polymorpha HOM05D006253 ORTHO05D007666 1.7e-34 149.4 111 67.6
AagrBONN_evm.TU.Sc2ySwM_344.4457 Anthoceros agrestis HOM05D006253 ORTHO05D007666 7.3e-33 144.1 111 64.9
Glyma.06G172100 Glycine max HOM05D006253 ORTHO05D007666 1.4e-31 139.8 83 84.3
Medtr2g105210 Medicago truncatula HOM05D006253 ORTHO05D007666 8.9e-31 137.1 107 72.9
Cc02_g18770 Coffea canephora HOM05D006253 ORTHO05D007666 2.2e-29 132.5 89 75.3
Pp3c22_3990 Physcomitrium patens HOM05D006253 ORTHO05D007666 4.9e-29 131.3 111 58.6
SalBow3G2580 Salvia bowleyana HOM05D006253 ORTHO05D007666 3.2e-28 128.6 86 76.7
SMO351G0094 Selaginella moellendorffii HOM05D006253 ORTHO05D007666 5.4e-28 127.9 111 58.6
Atru.chr5.2705 Acer truncatum HOM05D006253 ORTHO05D007666 2.1e-27 125.9 111 62.2
CSS0003209 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 2.3e-26 122.5 81 74.1
CSS0033941 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 3.0e-26 122.1 111 63.1
Prupe.4G258000 Prunus persica HOM05D006253 ORTHO05D007666 3.0e-26 122.1 110 59.1
Ah.10g034240 Amaranthus hybridus HOM05D006253 ORTHO05D007666 5.1e-26 121.3 86 74.4
Prupe.6G016400 Prunus persica HOM05D006253 ORTHO05D007666 5.1e-26 121.3 94 66.0
vmacro06019 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 1.5e-25 119.8 95 67.4
AUR62029937 Chenopodium quinoa HOM05D006253 ORTHO05D007666 2.5e-25 119.0 88 70.5
FAN20G2826 Fragaria x ananassa HOM05D006253 ORTHO05D007666 3.3e-25 118.6 111 59.5
CBR_g38557 Chara braunii HOM05D006253 ORTHO05D007666 4.3e-25 118.2 110 55.5
Hund00335 Selenicereus undatus HOM05D006253 ORTHO05D007666 1.1e-23 113.6 111 58.6
C01p04340 Brassica napus HOM05D006253 ORTHO05D007666 1.4e-23 113.2 83 71.1
AUR62033746 Chenopodium quinoa HOM05D006253 ORTHO05D007666 6.9e-23 110.9 111 58.6
CDE08G0295 Ceratophyllum demersum HOM05D006253 ORTHO05D007666 1.2e-22 110.2 82 64.6
Sabra09G0078100 Salix brachista HOM05D006253 ORTHO05D007666 2.0e-22 109.4 86 72.1
FAN15G3440 Fragaria x ananassa HOM05D006253 ORTHO05D007666 1.6e-19 99.8 111 53.2
Hma1.2p1_0804F.1_g221060 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 2.1e-19 99.4 69 73.9
MD10G1094500 Malus domestica HOM05D006253 ORTHO05D007666 1.5e-17 93.2 64 70.3
MCO10G211 Micromonas commoda HOM05D006253 ORTHO05D007666 3.6e-16 88.6 118 41.5
Cre01.g030950 Chlamydomonas reinhardtii HOM05D006253 ORTHO05D007666 5.3e-15 84.7 112 37.5
BolC1t00422H Brassica oleracea HOM05D006253 ORTHO05D007666 6.9e-15 84.3 54 81.5
Hma1.2p1_0674F.1_g201500 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 9.0e-15 84.0 58 74.1
vmacro19500 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 2.6e-14 82.4 68 66.2
PRCOL_00001305 Prasinoderma coloniale HOM05D006253 ORTHO05D007666 1.3e-13 80.1 122 40.2
Migut.N01188 Erythranthe guttata HOM05D006253 ORTHO05D007666 3.8e-13 78.6 55 74.5
SEGI_00233 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 6.4e-13 77.8 54 70.4
Aqoxy5G01240 Aquilegia oxysepala HOM05D006253 ORTHO05D007666 1.4e-12 76.6 57 66.7
Prupe.4G259300 Prunus persica HOM05D006253 ORTHO05D007666 9.3e-12 73.9 85 49.4
SEGI_00525 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 1.2e-11 73.6 58 67.2
Prupe.2G172700 Prunus persica HOM05D006253 ORTHO05D007666 1.0e-10 70.5 50 70.0
BolC1t00423H Brassica oleracea HOM05D000123 ORTHO05D009958 1.8e-07 59.7 57 57.9


User provided reference genes

Program Settings