Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G264600 Phaseolus vulgaris HOM05D006985 ORTHO05D008749 8.6e-108 393.7 197 100.0
VMungo0251G1437 Vigna mungo HOM05D006985 ORTHO05D008749 8.0e-98 360.5 198 92.9
Glyma.08G141300 Glycine max HOM05D006985 ORTHO05D008749 1.9e-86 322.8 197 83.8
Glyma.05G183500 Glycine max HOM05D006985 ORTHO05D008749 2.1e-85 319.3 198 84.3
arahy.Tifrunner.gnm1.ann1.MHK3H7 Arachis hypogaea HOM05D006985 ORTHO05D008749 2.3e-76 289.3 195 75.4
arahy.Tifrunner.gnm1.ann1.7DG6XK Arachis hypogaea HOM05D006985 ORTHO05D008749 3.0e-76 288.9 197 74.6
Lalb_Chr13g0296201 Lupinus albus HOM05D006985 ORTHO05D008749 1.9e-75 286.2 193 75.6
CiPaw.04G092100 Carya illinoinensis HOM05D006985 ORTHO05D008749 1.7e-71 273.1 193 68.4
QL06p032211 Quercus lobata HOM05D006985 ORTHO05D008749 1.2e-69 266.9 201 70.1
Cfa002750 Carpinus fangiana HOM05D006985 ORTHO05D008749 2.7e-69 265.8 198 66.2
Duzib147G0418 Durio zibethinus HOM05D006985 ORTHO05D008749 7.8e-69 264.2 193 71.0
Sabra05G0069300 Salix brachista HOM05D006985 ORTHO05D008749 2.3e-68 262.7 200 66.5
Manes.12G142400 Manihot esculenta HOM05D006985 ORTHO05D008749 5.1e-68 261.5 192 67.7
Potri.005G084200 Populus trichocarpa HOM05D006985 ORTHO05D008749 1.3e-66 256.9 201 65.7
COL.COLO4_11016 Corchorus olitorius HOM05D006985 ORTHO05D008749 1.6e-66 256.5 190 71.6
Thecc.01G112400 Theobroma cacao HOM05D006985 ORTHO05D008749 2.8e-66 255.8 193 68.9
Haze_25036 Corylus avellana HOM05D006985 ORTHO05D008749 4.8e-66 255.0 200 64.5
Lj4g0016816 Lotus japonicus HOM05D006985 ORTHO05D008749 4.8e-66 255.0 195 67.7
GSVIVG01022222001 Vitis vinifera HOM05D006985 ORTHO05D008749 2.6e-64 249.2 197 66.0
Psat7g051440 Pisum sativum HOM05D006985 ORTHO05D008749 3.4e-64 248.8 189 69.3
Gohir.A02G134801 Gossypium hirsutum HOM05D006985 ORTHO05D008749 9.9e-64 247.3 193 67.9
Gohir.D03G045800 Gossypium hirsutum HOM05D006985 ORTHO05D008749 1.3e-63 246.9 194 69.1
Gorai.003G047000 Gossypium raimondii HOM05D006985 ORTHO05D008749 1.3e-63 246.9 194 69.1
CSS0005033 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 2.2e-63 246.1 193 66.8
Eucgr.I00326 Eucalyptus grandis HOM05D006985 ORTHO05D008749 4.9e-63 245.0 205 62.9
TWI53G2009 Tripterygium wilfordii HOM05D006985 ORTHO05D008749 4.9e-63 245.0 193 64.2
Nn5g28916 Nelumbo nucifera HOM05D006985 ORTHO05D008749 8.4e-63 244.2 192 65.1
TAR625G1052 Trochodendron aralioides HOM05D006985 ORTHO05D008749 8.4e-63 244.2 193 65.3
CANSAT01G0007 Cannabis sativa HOM05D006985 ORTHO05D008749 1.4e-62 243.4 197 66.0
Atru.chr4.358 Acer truncatum HOM05D006985 ORTHO05D008749 4.2e-62 241.9 197 66.0
CSS0027796 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 7.1e-62 241.1 192 66.7
Ca_17697_v3 Cicer arietinum L. HOM05D006985 ORTHO05D008749 7.1e-62 241.1 198 67.7
Actinidia28892 Actinidia chinensis HOM05D006985 ORTHO05D008749 3.5e-61 238.8 194 64.4
Rhsim10G0013600 Rhododendron simsii HOM05D006985 ORTHO05D008749 3.5e-61 238.8 199 64.3
ECA238G4202 Erigeron canadensis HOM05D006985 ORTHO05D008749 1.0e-60 237.3 199 63.3
PGR004G1495 Punica granatum HOM05D006985 ORTHO05D008749 1.7e-60 236.5 205 61.5
Lsat_1_v5_gn_2_67381 Lactuca sativa HOM05D006985 ORTHO05D008749 5.1e-60 235.0 200 65.0
Lj2A564T40 Lonicera japonica HOM05D006985 ORTHO05D008749 5.1e-60 235.0 194 62.4
Ciclev10026526m.g Citrus clementina HOM05D006985 ORTHO05D008749 1.1e-59 233.8 148 76.4
Rhsim08G0007300 Rhododendron simsii HOM05D006985 ORTHO05D008749 2.5e-59 232.6 199 63.3
Duzib187G0142 Durio zibethinus HOM05D006985 ORTHO05D008749 4.3e-59 231.9 196 64.8
Hma1.2p1_0375F.1_g138690 Hydrangea macrophylla HOM05D006985 ORTHO05D008749 5.6e-59 231.5 166 71.1
MD15G1333400 Malus domestica HOM05D006985 ORTHO05D008749 9.6e-59 230.7 192 66.7
Oeu028373.1 Olea europaea HOM05D006985 ORTHO05D008749 9.6e-59 230.7 195 63.6
Rhsim08G0006600 Rhododendron simsii HOM05D006985 ORTHO05D008749 1.3e-58 230.3 201 62.2
Oeu030683.1 Olea europaea HOM05D006985 ORTHO05D008749 8.1e-58 227.6 198 62.6
Prupe.6G173300 Prunus persica HOM05D006985 ORTHO05D008749 1.8e-57 226.5 195 62.1
RcHm_v2.0_Chr2g0116361 Rosa chinensis HOM05D006985 ORTHO05D008749 3.1e-57 225.7 200 63.5
Sed0020932 Sechium edule HOM05D006985 ORTHO05D008749 6.9e-57 224.6 193 61.1
ClCG01G016160 Citrullus lanatus HOM05D006985 ORTHO05D008749 9.0e-57 224.2 197 61.9
FAN23G1894 Fragaria x ananassa HOM05D006985 ORTHO05D008749 9.0e-57 224.2 201 62.2
Nitab4.5_0000471g0030 Nicotiana tabacum HOM05D006985 ORTHO05D008749 9.0e-57 224.2 193 62.7
THA.LOC104804144 Tarenaya hassleriana HOM05D006985 ORTHO05D008749 1.2e-56 223.8 199 57.8
CAN.G276.1 Capsicum annuum HOM05D006985 ORTHO05D008749 1.5e-56 223.4 188 63.8
MBI02_g45734_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 1.5e-56 223.4 198 58.6
MELO3C007486.2 Cucumis melo HOM05D006985 ORTHO05D008749 2.6e-56 222.6 198 62.1
FvH4_1g22220 Fragaria vesca HOM05D006985 ORTHO05D008749 2.6e-56 222.6 199 62.3
Dinv42695 Davidia involucrata HOM05D006985 ORTHO05D008749 3.4e-56 222.2 200 62.0
Cpa.g.sc196.10 Carica papaya HOM05D006985 ORTHO05D008749 9.9e-56 220.7 159 71.1
HanXRQChr14g0446291 Helianthus annuus HOM05D006985 ORTHO05D008749 9.9e-56 220.7 198 60.1
Peaxi162Scf00323g00052 Petunia axillaris HOM05D006985 ORTHO05D008749 9.9e-56 220.7 192 62.5
Cc07_g16120 Coffea canephora HOM05D006985 ORTHO05D008749 1.7e-55 219.9 206 59.2
PGSC0003DMG400016590 Solanum tuberosum HOM05D006985 ORTHO05D008749 3.8e-55 218.8 190 64.7
CsaV3_6G042430 Cucumis sativus L. HOM05D006985 ORTHO05D008749 8.4e-55 217.6 172 66.3
vmacro18630 Vaccinium macrocarpon HOM05D006985 ORTHO05D008749 1.9e-54 216.5 210 56.2
Sopen04g023520 Solanum pennellii HOM05D006985 ORTHO05D008749 2.4e-54 216.1 190 63.2
MSTRG.23313 Avicennia marina HOM05D006985 ORTHO05D008749 3.2e-54 215.7 196 58.7
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 5.4e-54 214.9 139 74.1
SalBow6G7167 Salvia bowleyana HOM05D006985 ORTHO05D008749 1.2e-53 213.8 195 59.0
Solyc04g053130.4 Solanum lycopersicum HOM05D006985 ORTHO05D008749 1.2e-53 213.8 188 62.8
MBI02_g20708_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 6.0e-53 211.5 166 63.3
A09p57880 Brassica napus HOM05D006985 ORTHO05D008749 2.5e-51 206.1 197 55.8
C08p41110 Brassica napus HOM05D006985 ORTHO05D008749 3.3e-51 205.7 197 55.8
BolC8t51677H Brassica oleracea HOM05D006985 ORTHO05D008749 3.3e-51 205.7 197 55.8
BraA09t41180Z Brassica rapa HOM05D006985 ORTHO05D008749 3.3e-51 205.7 197 55.8
BcaC07g41109 Brassica carinata HOM05D006985 ORTHO05D008749 4.3e-51 205.3 197 55.3
DCAR_010078 Daucus carota HOM05D006985 ORTHO05D008749 7.4e-51 204.5 193 57.0
Sc16g0004160 Simmondsia chinensis HOM05D006985 ORTHO05D008749 7.4e-51 204.5 192 58.9
Carub.0004s0111 Capsella rubella HOM05D006985 ORTHO05D008749 1.6e-50 203.4 161 63.4
Sp4g01050 Schrenkiella parvula HOM05D006985 ORTHO05D008749 1.6e-50 203.4 160 63.1
AL4G11290 Arabidopsis lyrata HOM05D006985 ORTHO05D008749 2.1e-50 203.0 200 54.5
Thhalv10000325m.g Eutrema salsugineum HOM05D006985 ORTHO05D008749 2.8e-50 202.6 162 61.7
Aa31LG7G14690 Aethionema arabicum HOM05D006985 ORTHO05D008749 6.2e-50 201.4 158 62.0
BcaB08g35014 Brassica carinata HOM05D006985 ORTHO05D008749 8.1e-50 201.1 194 56.7
AT2G21970 Arabidopsis thaliana HOM05D006985 ORTHO05D008749 1.8e-49 199.9 159 62.3
Migut.H02428 Erythranthe guttata HOM05D006985 ORTHO05D008749 9.0e-49 197.6 160 64.4
AUR62016276 Chenopodium quinoa HOM05D006985 ORTHO05D008749 4.5e-48 195.3 210 54.3
SGA_v2.0_scaffold51G18747 Striga asiatica HOM05D006985 ORTHO05D008749 1.0e-47 194.1 195 53.8
Aqoxy5G01954 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 1.3e-47 193.7 192 51.6
AUR62003309 Chenopodium quinoa HOM05D006985 ORTHO05D008749 1.7e-47 193.4 210 54.3
CDE02G4368 Ceratophyllum demersum HOM05D006985 ORTHO05D008749 4.9e-47 191.8 145 64.1
Aqoxy7G01607 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 6.5e-47 191.4 193 51.3
Hund03540 Selenicereus undatus HOM05D006985 ORTHO05D008749 6.5e-47 191.4 210 52.4
Zm00001eb431840 Zea mays HOM05D006985 ORTHO05D008749 1.4e-46 190.3 205 51.7
Ah.03g141710 Amaranthus hybridus HOM05D006985 ORTHO05D008749 7.1e-46 188.0 210 52.4
EL10Ac6g14751 Beta vulgaris HOM05D006985 ORTHO05D008749 3.5e-45 185.7 204 52.0
MSTRG.3810 Avicennia marina HOM05D006985 ORTHO05D008749 7.9e-45 184.5 144 63.9
Os04g0639200 Oryza sativa ssp. japonica HOM05D006985 ORTHO05D008749 3.9e-44 182.2 199 49.7
HPP92_013077 Vanilla planifolia HOM05D006985 ORTHO05D008749 4.8e-42 175.3 153 56.2
PSO210G1005 Papaver somniferum HOM05D006985 ORTHO05D008749 4.0e-41 172.2 207 44.0
ATR0564G194 Amborella trichopoda HOM05D006985 ORTHO05D008749 3.2e-38 162.5 141 56.0
SEGI_00004 Sequoiadendron giganteum HOM05D006985 ORTHO05D008749 1.3e-34 150.6 142 50.7
CARHR113060 Cardamine hirsuta HOM05D006985 ORTHO05D008749 4.3e-27 125.6 89 64.0
PSO170G0586 Papaver somniferum HOM05D006985 ORTHO05D008749 1.8e-25 120.2 140 47.9
Hund19658 Selenicereus undatus HOM05D006985 ORTHO05D008749 1.7e-23 113.6 237 33.8
AagrBONN_evm.TU.Sc2ySwM_362.2621 Anthoceros agrestis HOM05D006985 ORTHO05D008749 2.7e-21 106.3 146 38.4
FAN26G1540 Fragaria x ananassa HOM05D000436 ORTHO05D000678 2.0e-19 100.1 116 56.0
CBR_g770 Chara braunii HOM05D006985 ORTHO05D008749 2.6e-16 89.7 139 35.3
SMO356G0636 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 1.3e-15 87.4 139 31.7
CARHR113050 Cardamine hirsuta HOM05D006985 ORTHO05D008749 2.9e-15 86.3 114 48.2
unitig_88.g27736 Utricularia gibba HOM05D006985 ORTHO05D008749 5.0e-15 85.5 61 65.6
SMO174G0105 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 6.5e-15 85.1 151 30.5
Pp3c16_13700 Physcomitrium patens HOM05D006985 ORTHO05D008749 1.5e-14 84.0 156 34.6
Mapoly0007s0046 Marchantia polymorpha HOM05D006985 ORTHO05D008749 1.6e-13 80.5 138 34.8
CDE08G1171 Ceratophyllum demersum HOM05D000290 ORTHO05D009072 3.0e-12 76.3 86 47.7
Pp3c27_3810 Physcomitrium patens HOM05D006985 ORTHO05D008749 3.0e-12 76.3 135 34.8


User provided reference genes

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