Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G259600 Phaseolus vulgaris HOM05D006816 ORTHO05D008666 0.0e+00 1190.3 617 100.0
VMungo0251G0196 Vigna mungo HOM05D006816 ORTHO05D008666 0.0e+00 1082.0 618 91.3
Glyma.05G174600 Glycine max HOM05D006816 ORTHO05D008666 1.5e-296 1022.3 618 87.9
Lalb_Chr07g0185401 Lupinus albus HOM05D006816 ORTHO05D008666 5.5e-254 880.9 634 76.0
Lj4g0008868 Lotus japonicus HOM05D006816 ORTHO05D008666 1.3e-247 859.8 600 77.3
Medtr8g089810 Medicago truncatula HOM05D006816 ORTHO05D008666 6.8e-244 847.4 593 75.0
Ca_17778_v3 Cicer arietinum L. HOM05D006816 ORTHO05D008666 2.6e-243 845.5 575 77.2
TPR.G6183 Trifolium pratense HOM05D006816 ORTHO05D008666 2.8e-242 842.0 579 75.8
Psat7g059360 Pisum sativum HOM05D006816 ORTHO05D008666 6.6e-231 804.3 588 73.6
TAR622G0126 Trochodendron aralioides HOM05D006816 ORTHO05D008666 6.2e-197 691.4 614 63.0
QL03p057598 Quercus lobata HOM05D006816 ORTHO05D008666 9.9e-195 684.1 563 66.4
Ciclev10030964m.g Citrus clementina HOM05D006816 ORTHO05D008666 2.5e-190 669.5 595 63.0
Haze_12261 Corylus avellana HOM05D006816 ORTHO05D008666 1.5e-187 660.2 691 56.3
Eucgr.H02486 Eucalyptus grandis HOM05D006816 ORTHO05D008666 5.8e-187 658.3 575 63.5
Dinv15216 Davidia involucrata HOM05D006816 ORTHO05D008666 2.2e-186 656.4 614 62.4
GSVIVG01000542001 Vitis vinifera HOM05D006816 ORTHO05D008666 2.5e-185 652.9 570 63.5
FAN17G1412 Fragaria x ananassa HOM05D006816 ORTHO05D008666 3.2e-185 652.5 544 66.2
TWI36G0164 Tripterygium wilfordii HOM05D006816 ORTHO05D008666 3.5e-184 649.0 541 65.6
FAN22G0176 Fragaria x ananassa HOM05D006816 ORTHO05D008666 5.7e-182 641.7 589 62.3
Gohir.A03G133700 Gossypium hirsutum HOM05D006816 ORTHO05D008666 1.3e-181 640.6 561 64.9
Lj3C1059T10 Lonicera japonica HOM05D006816 ORTHO05D008666 1.4e-180 637.1 550 63.8
Hund06034 Selenicereus undatus HOM05D006816 ORTHO05D008666 1.4e-180 637.1 609 59.6
PSO063G6228 Papaver somniferum HOM05D006816 ORTHO05D008666 3.1e-180 636.0 562 61.9
Cpa.g.sc33.36 Carica papaya HOM05D006816 ORTHO05D008666 4.0e-180 635.6 558 62.5
Gorai.005G177300 Gossypium raimondii HOM05D006816 ORTHO05D008666 9.0e-180 634.4 594 62.0
Gohir.D02G158100 Gossypium hirsutum HOM05D006816 ORTHO05D008666 1.5e-179 633.6 591 62.3
PSO754G0080 Papaver somniferum HOM05D006816 ORTHO05D008666 3.4e-179 632.5 562 61.7
Ah.02g130220 Amaranthus hybridus HOM05D006816 ORTHO05D008666 1.3e-178 630.6 547 63.6
MD13G1099700 Malus domestica HOM05D006816 ORTHO05D008666 3.8e-178 629.0 564 62.2
COL.COLO4_23463 Corchorus olitorius HOM05D006816 ORTHO05D008666 5.5e-177 625.2 613 58.7
BcaB03g15378 Brassica carinata HOM05D006816 ORTHO05D008666 1.0e-175 620.9 564 61.7
BcaC08g46032 Brassica carinata HOM05D006816 ORTHO05D008666 2.3e-175 619.8 564 61.0
Manes.13G022900 Manihot esculenta HOM05D006816 ORTHO05D008666 2.3e-175 619.8 594 60.6
Oeu057544.1 Olea europaea HOM05D006816 ORTHO05D008666 5.1e-175 618.6 610 57.9
C06p38240 Brassica napus HOM05D006816 ORTHO05D008666 1.5e-174 617.1 562 60.9
BolC6t38923H Brassica oleracea HOM05D006816 ORTHO05D008666 1.5e-174 617.1 564 60.8
CARHR060480 Cardamine hirsuta HOM05D006816 ORTHO05D008666 1.9e-174 616.7 564 60.8
Carub.0002s1430 Capsella rubella HOM05D006816 ORTHO05D008666 2.5e-174 616.3 570 60.0
Thhalv10018280m.g Eutrema salsugineum HOM05D006816 ORTHO05D008666 4.3e-174 615.5 543 62.4
Aqoxy5G03738 Aquilegia oxysepala HOM05D006816 ORTHO05D008666 5.7e-174 615.1 540 61.3
AT1G67840 Arabidopsis thaliana HOM05D006816 ORTHO05D008666 7.4e-174 614.8 612 58.5
Sp5g22850 Schrenkiella parvula HOM05D006816 ORTHO05D008666 9.7e-174 614.4 543 62.4
BraA07t30858Z Brassica rapa HOM05D006816 ORTHO05D008666 2.2e-173 613.2 564 61.3
A07p32350 Brassica napus HOM05D006816 ORTHO05D008666 3.7e-173 612.5 563 61.5
CsaV3_5G031010 Cucumis sativus L. HOM05D006816 ORTHO05D008666 3.7e-173 612.5 541 62.1
AUR62024254 Chenopodium quinoa HOM05D006816 ORTHO05D008666 4.8e-173 612.1 578 58.8
EL10Ac6g13857 Beta vulgaris HOM05D006816 ORTHO05D008666 1.2e-171 607.4 540 61.7
AL2G26590 Arabidopsis lyrata HOM05D006816 ORTHO05D008666 2.6e-171 606.3 542 61.6
Sed0004203 Sechium edule HOM05D006816 ORTHO05D008666 4.5e-171 605.5 589 57.6
THA.LOC104825556 Tarenaya hassleriana HOM05D006816 ORTHO05D008666 5.9e-171 605.1 532 62.6
MELO3C011940.2 Cucumis melo HOM05D006816 ORTHO05D008666 7.7e-171 604.7 554 61.2
Migut.K00611 Erythranthe guttata HOM05D006816 ORTHO05D008666 1.3e-170 604.0 552 61.2
HanXRQChr17g0569531 Helianthus annuus HOM05D006816 ORTHO05D008666 8.5e-170 601.3 541 61.0
FvH4_4g25720 Fragaria vesca HOM05D006816 ORTHO05D008666 7.2e-169 598.2 587 58.1
Aa31sc755G30 Aethionema arabicum HOM05D006816 ORTHO05D008666 1.2e-168 597.4 615 56.4
PGSC0003DMG400018598 Solanum tuberosum HOM05D006816 ORTHO05D008666 2.1e-168 596.7 593 57.7
Atru.chr11.2152 Acer truncatum HOM05D006816 ORTHO05D008666 3.6e-168 595.9 597 58.6
ECA234G3219 Erigeron canadensis HOM05D006816 ORTHO05D008666 3.6e-168 595.9 532 60.3
Sopen05g008580 Solanum pennellii HOM05D006816 ORTHO05D008666 6.1e-168 595.1 614 56.4
vmacro01121 Vaccinium macrocarpon HOM05D006816 ORTHO05D008666 2.3e-167 593.2 632 56.0
Solyc05g013670.3 Solanum lycopersicum HOM05D006816 ORTHO05D008666 2.0e-166 590.1 584 57.4
Nitab4.5_0006963g0030 Nicotiana tabacum HOM05D006816 ORTHO05D008666 3.3e-166 589.3 561 59.4
Lsat_1_v5_gn_4_4020 Lactuca sativa HOM05D006816 ORTHO05D008666 7.4e-166 588.2 556 58.6
FAN12G1622 Fragaria x ananassa HOM05D006816 ORTHO05D008666 1.7e-165 587.0 544 61.0
SalBow2G0630 Salvia bowleyana HOM05D006816 ORTHO05D008666 2.4e-164 583.2 609 55.3
ClCG05G025840 Citrullus lanatus HOM05D006816 ORTHO05D008666 6.9e-164 581.6 557 58.9
CANSAT01G2021 Cannabis sativa HOM05D006816 ORTHO05D008666 2.6e-163 579.7 590 58.6
Nn4g22582 Nelumbo nucifera HOM05D006816 ORTHO05D008666 7.7e-163 578.2 543 59.5
RcHm_v2.0_Chr4g0433151 Rosa chinensis HOM05D006816 ORTHO05D008666 7.7e-163 578.2 623 55.7
Sabra10G0021100 Salix brachista HOM05D006816 ORTHO05D008666 5.0e-162 575.5 626 55.8
Cc11_g15850 Coffea canephora HOM05D006816 ORTHO05D008666 1.9e-161 573.5 563 57.4
Peaxi162Scf00128g00318 Petunia axillaris HOM05D006816 ORTHO05D008666 1.9e-161 573.5 584 56.8
arahy.Tifrunner.gnm1.ann1.2HFS1Z Arachis hypogaea HOM05D006816 ORTHO05D008666 2.5e-161 573.2 437 72.5
CSS0008455 Camellia sinensis var. sinensis HOM05D006816 ORTHO05D008666 2.5e-161 573.2 540 59.4
arahy.Tifrunner.gnm1.ann1.CH9KSW Arachis hypogaea HOM05D006816 ORTHO05D008666 1.8e-159 567.0 437 71.9
PGR119G0117 Punica granatum HOM05D006816 ORTHO05D008666 4.4e-158 562.4 603 53.6
AUR62005487 Chenopodium quinoa HOM05D006816 ORTHO05D008666 6.3e-157 558.5 616 53.4
unitig_699.g19932 Utricularia gibba HOM05D006816 ORTHO05D008666 3.6e-152 542.7 555 55.3
ATR0824G245 Amborella trichopoda HOM05D006816 ORTHO05D008666 3.9e-151 539.3 560 54.8
Duzib251G0886 Durio zibethinus HOM05D006816 ORTHO05D008666 2.8e-149 533.1 557 57.6
CAN.G436.5 Capsicum annuum HOM05D006816 ORTHO05D008666 1.2e-142 511.1 473 59.8
Zm00001eb319330 Zea mays HOM05D006816 ORTHO05D008666 2.8e-141 506.5 551 53.7
Actinidia01356 Actinidia chinensis HOM05D006816 ORTHO05D008666 3.2e-137 493.0 548 56.2
Nitab4.5_0000524g0100 Nicotiana tabacum HOM05D006816 ORTHO05D008666 8.3e-133 478.4 522 55.2
DCAR_031163 Daucus carota HOM05D006816 ORTHO05D008666 3.8e-130 469.5 599 47.6
Sc11g0000930 Simmondsia chinensis HOM05D006816 ORTHO05D008666 2.8e-128 463.4 473 55.8
SGA_v2.0_scaffold100G29566 Striga asiatica HOM05D006816 ORTHO05D008666 2.5e-113 413.7 572 45.3
SEGI_18687 Sequoiadendron giganteum HOM05D006816 ORTHO05D008666 4.3e-113 412.9 548 44.9
Thecc.02G261900 Theobroma cacao HOM05D006816 ORTHO05D008666 1.6e-107 394.4 454 56.2
HPP92_023364 Vanilla planifolia HOM05D006816 ORTHO05D008666 7.6e-102 375.6 314 62.4
FAN07G2231 Fragaria x ananassa HOM05D006816 ORTHO05D008666 8.4e-101 372.1 466 53.0
CiPaw.05G180700 Carya illinoinensis HOM05D006816 ORTHO05D008666 1.9e-100 370.9 354 60.7
Potri.010G047500 Populus trichocarpa HOM05D006816 ORTHO05D008666 3.2e-100 370.2 373 58.4
Prupe.1G246300 Prunus persica HOM05D006816 ORTHO05D008666 1.2e-94 351.7 391 55.0
CDE02G3152 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 5.4e-84 316.2 494 42.9
Os12g0292900 Oryza sativa ssp. japonica HOM05D006816 ORTHO05D008666 3.9e-82 310.1 445 46.7
Mapoly0088s0066 Marchantia polymorpha HOM05D006816 ORTHO05D008666 3.1e-79 300.4 603 36.7
Glyma.08G131850 Glycine max HOM05D006816 ORTHO05D008666 1.9e-73 281.2 179 83.2
MBI17_g43191_MAGBIO Magnolia biondii HOM05D006816 ORTHO05D008666 6.1e-59 233.0 243 56.0
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 2.1e-51 208.0 146 76.0
Pp3c11_24610 Physcomitrium patens HOM05D006816 ORTHO05D008666 1.3e-48 198.7 540 31.9
Psat3g153200 Pisum sativum HOM05D006816 ORTHO05D008666 2.2e-48 198.0 136 77.2
Psat2g121560 Pisum sativum HOM05D006816 ORTHO05D008666 5.3e-39 166.8 117 75.2
Psat4g077560 Pisum sativum HOM05D006816 ORTHO05D008666 3.2e-36 157.5 98 83.7
Glyma.08G131775 Glycine max HOM05D006816 ORTHO05D008666 7.7e-30 136.3 85 82.4
CBR_g52389 Chara braunii HOM05D006816 ORTHO05D008666 1.0e-29 136.0 368 29.6
CDE09G0157 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 2.2e-29 134.8 167 44.9
HPP92_023363 Vanilla planifolia HOM05D006816 ORTHO05D008666 2.3e-26 124.8 129 54.3
COL.COLO4_35805 Corchorus olitorius HOM05D006816 ORTHO05D008666 3.1e-23 114.4 98 60.2
Actinidia01355 Actinidia chinensis HOM05D006816 ORTHO05D008666 5.7e-17 93.6 61 73.8
Actinidia08129 Actinidia chinensis HOM05D006816 ORTHO05D008666 9.2e-15 86.3 80 60.0
CBR_g52391 Chara braunii HOM05D006816 ORTHO05D008666 1.6e-14 85.5 189 32.3
FvH4_4g35670 Fragaria vesca HOM05D006816 ORTHO05D008666 2.3e-13 81.6 91 50.5
FAN22G1065 Fragaria x ananassa HOM05D000247 ORTHO05D000288 8.0e-11 73.2 116 43.1


User provided reference genes

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