Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G258200 Phaseolus vulgaris HOM05D007364 ORTHO05D009275 8.0e-68 260.4 140 100.0
VMungo0251G1224 Vigna mungo HOM05D007364 ORTHO05D009275 1.1e-61 240.0 140 89.3
Glyma.08G130400 Glycine max HOM05D007364 ORTHO05D009275 7.8e-55 217.2 140 79.3
Glyma.05G173100 Glycine max HOM05D007364 ORTHO05D009275 1.1e-53 213.4 140 78.6
Ca_17791_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 6.0e-47 191.0 138 68.1
Ca_29552_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 6.0e-47 191.0 138 68.1
arahy.Tifrunner.gnm1.ann1.TFQ65X Arachis hypogaea HOM05D007364 ORTHO05D009275 1.1e-45 186.8 131 70.2
TPR.G6288 Trifolium pratense HOM05D007364 ORTHO05D009275 1.1e-45 186.8 133 68.4
arahy.Tifrunner.gnm1.ann1.A7U39C Arachis hypogaea HOM05D007364 ORTHO05D009275 2.5e-45 185.7 131 69.5
Lj4g0012611 Lotus japonicus HOM05D007364 ORTHO05D009275 4.3e-45 184.9 132 67.4
Psat7g058640 Pisum sativum HOM05D007364 ORTHO05D009275 2.8e-44 182.2 133 66.9
Lalb_Chr07g0185511 Lupinus albus HOM05D007364 ORTHO05D009275 1.8e-43 179.5 127 70.9
Cfa003431 Carpinus fangiana HOM05D007364 ORTHO05D009275 3.2e-40 168.7 141 62.4
Haze_16200 Corylus avellana HOM05D007364 ORTHO05D009275 1.6e-39 166.4 144 63.9
TAR625G0136 Trochodendron aralioides HOM05D007364 ORTHO05D009275 2.8e-36 155.6 141 56.0
Manes.14G008700 Manihot esculenta HOM05D007364 ORTHO05D009275 3.6e-36 155.2 144 57.6
TAR636G2112 Trochodendron aralioides HOM05D007364 ORTHO05D009275 3.6e-36 155.2 133 55.6
FAN05G2474 Fragaria x ananassa HOM05D007364 ORTHO05D009275 1.4e-35 153.3 141 56.0
FvH4_6g36820 Fragaria vesca HOM05D007364 ORTHO05D009275 5.3e-35 151.4 144 55.6
FAN02G1908 Fragaria x ananassa HOM05D007364 ORTHO05D009275 5.3e-35 151.4 144 55.6
FAN14G5026 Fragaria x ananassa HOM05D007364 ORTHO05D009275 5.3e-35 151.4 144 55.6
Prupe.3G024300 Prunus persica HOM05D007364 ORTHO05D009275 5.3e-35 151.4 146 56.2
ClCG07G014710 Citrullus lanatus HOM05D007364 ORTHO05D009275 2.6e-34 149.1 137 53.3
QL05p088447 Quercus lobata HOM05D007364 ORTHO05D009275 3.4e-34 148.7 140 57.1
Gohir.A05G115400 Gossypium hirsutum HOM05D007364 ORTHO05D009275 1.3e-33 146.7 144 56.9
RcHm_v2.0_Chr2g0149211 Rosa chinensis HOM05D007364 ORTHO05D009275 1.3e-33 146.7 144 54.2
Aqoxy5G03758 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 1.7e-33 146.4 117 58.1
MD09G1166600 Malus domestica HOM05D007364 ORTHO05D009275 1.7e-33 146.4 136 55.9
Thecc.06G054700 Theobroma cacao HOM05D007364 ORTHO05D009275 2.2e-33 146.0 143 57.3
TWI38G2254 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 2.2e-33 146.0 128 58.6
Duzib235G1177 Durio zibethinus HOM05D007364 ORTHO05D009275 2.9e-33 145.6 143 55.9
FAN09G0058 Fragaria x ananassa HOM05D007364 ORTHO05D009275 6.4e-33 144.4 137 57.7
Gohir.D05G115800 Gossypium hirsutum HOM05D007364 ORTHO05D009275 6.4e-33 144.4 144 56.9
Ah.15g094280 Amaranthus hybridus HOM05D007364 ORTHO05D009275 8.4e-33 144.1 119 58.8
CANSAT78G1269 Cannabis sativa HOM05D007364 ORTHO05D009275 8.4e-33 144.1 134 58.2
Gorai.009G119800 Gossypium raimondii HOM05D007364 ORTHO05D009275 1.1e-32 143.7 144 56.9
MELO3C010416.2 Cucumis melo HOM05D007364 ORTHO05D009275 1.9e-32 142.9 121 57.0
AUR62001324 Chenopodium quinoa HOM05D007364 ORTHO05D009275 2.7e-31 139.0 119 56.3
TWI63G0101 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 1.0e-30 137.1 128 53.1
EL10Ac7g18129 Beta vulgaris HOM05D007364 ORTHO05D009275 3.0e-30 135.6 119 53.8
AUR62025707 Chenopodium quinoa HOM05D007364 ORTHO05D009275 3.0e-30 135.6 119 53.8
Potri.010G254100 Populus trichocarpa HOM05D007364 ORTHO05D009275 5.1e-30 134.8 140 52.1
Ciclev10013953m.g Citrus clementina HOM05D007364 ORTHO05D009275 3.3e-29 132.1 142 47.9
Atru.chr1.2614 Acer truncatum HOM05D007364 ORTHO05D009275 7.4e-29 131.0 117 54.7
Aa31LG7G1240 Aethionema arabicum HOM05D007364 ORTHO05D009275 2.8e-28 129.0 128 53.1
Sed0001602 Sechium edule HOM05D007364 ORTHO05D009275 3.6e-28 128.6 110 54.5
THA.LOC104812333 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 1.1e-27 127.1 128 53.1
MBI16_g18204_MAGBIO Magnolia biondii HOM05D007364 ORTHO05D009275 3.1e-27 125.6 144 46.5
PGR031G1732 Punica granatum HOM05D007364 ORTHO05D009275 4.0e-27 125.2 147 52.4
Carub.0001s1652 Capsella rubella HOM05D007364 ORTHO05D009275 6.9e-27 124.4 129 53.5
Eucgr.J03185 Eucalyptus grandis HOM05D007364 ORTHO05D009275 1.2e-26 123.6 115 54.8
PSO063G5199 Papaver somniferum HOM05D007364 ORTHO05D009275 2.6e-26 122.5 122 47.5
AL1G28960 Arabidopsis lyrata HOM05D007364 ORTHO05D009275 4.5e-26 121.7 129 51.9
CARHR017250 Cardamine hirsuta HOM05D007364 ORTHO05D009275 4.5e-26 121.7 135 48.1
Nitab4.5_0011805g0010 Nicotiana tabacum HOM05D007364 ORTHO05D009275 4.5e-26 121.7 128 55.5
Aqoxy2G03840 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 7.6e-26 120.9 101 56.4
Sp1g14930 Schrenkiella parvula HOM05D007364 ORTHO05D009275 7.6e-26 120.9 138 50.0
AT1G16790 Arabidopsis thaliana HOM05D007364 ORTHO05D009275 2.9e-25 119.0 135 48.1
Thhalv10009015m.g Eutrema salsugineum HOM05D007364 ORTHO05D009275 2.9e-25 119.0 138 47.1
Peaxi162Scf00062g00099 Petunia axillaris HOM05D007364 ORTHO05D009275 3.8e-25 118.6 128 53.9
C05p15020 Brassica napus HOM05D007364 ORTHO05D009275 8.4e-25 117.5 138 49.3
BcaB03g13030 Brassica carinata HOM05D007364 ORTHO05D009275 1.4e-24 116.7 139 45.3
BolC5t30217H Brassica oleracea HOM05D007364 ORTHO05D009275 1.9e-24 116.3 138 48.6
BcaC07g38817 Brassica carinata HOM05D007364 ORTHO05D009275 2.4e-24 115.9 139 46.8
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 2.4e-24 115.9 139 46.8
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 3.2e-24 115.5 139 46.0
Sc15g0001160 Simmondsia chinensis HOM05D000912 ORTHO05D008392 3.2e-24 115.5 105 52.4
Sopen12g034580 Solanum pennellii HOM05D007364 ORTHO05D009275 4.2e-24 115.2 128 51.6
A06p12720 Brassica napus HOM05D007364 ORTHO05D009275 5.5e-24 114.8 138 51.4
BraA06t24432Z Brassica rapa HOM05D007364 ORTHO05D009275 5.5e-24 114.8 137 51.1
Actinidia21894 Actinidia chinensis HOM05D007364 ORTHO05D009275 7.1e-24 114.4 121 54.5
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 9.3e-24 114.0 121 49.6
PGSC0003DMG400004654 Solanum tuberosum HOM05D007364 ORTHO05D009275 9.3e-24 114.0 128 50.8
LjContig00484g0025496 Lotus japonicus HOM05D007364 ORTHO05D009275 1.2e-23 113.6 95 62.1
PSO170G0377 Papaver somniferum HOM05D007364 ORTHO05D009275 1.6e-23 113.2 112 47.3
Solyc12g099960.1 Solanum lycopersicum HOM05D007364 ORTHO05D009275 1.6e-23 113.2 122 52.5
CAN.G484.12 Capsicum annuum HOM05D007364 ORTHO05D009275 2.1e-23 112.8 130 50.0
Cc09_g07400 Coffea canephora HOM05D007364 ORTHO05D009275 4.6e-23 111.7 126 50.8
CsaV3_4G028750 Cucumis sativus L. HOM05D007364 ORTHO05D009275 1.3e-22 110.2 83 62.7
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 5.1e-22 108.2 127 47.2
Actinidia38815 Actinidia chinensis HOM05D007364 ORTHO05D009275 1.1e-21 107.1 116 54.3
Nitab4.5_0001925g0240 Nicotiana tabacum HOM05D007364 ORTHO05D009275 1.9e-21 106.3 103 56.3
Hma1.2p1_0191F.1_g083440 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 5.6e-21 104.8 155 42.6
Hma1.2p1_3076F.1_g332395 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 5.6e-21 104.8 155 42.6
COL.COLO4_38285 Corchorus olitorius HOM05D007364 ORTHO05D009275 1.3e-20 103.6 100 53.0
CiPaw.01G094100 Carya illinoinensis HOM05D007364 ORTHO05D009275 3.7e-20 102.1 95 52.6
CiPaw.01G207600 Carya illinoinensis HOM05D007364 ORTHO05D009275 1.4e-19 100.1 74 63.5
Lsat_1_v5_gn_4_106261 Lactuca sativa HOM05D007364 ORTHO05D009275 1.8e-19 99.8 125 45.6
THA.LOC104808105 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 2.4e-19 99.4 113 46.9
unitig_26.g10058 Utricularia gibba HOM05D007364 ORTHO05D009275 4.0e-19 98.6 141 44.7
DCAR_001424 Daucus carota HOM05D007364 ORTHO05D009275 6.9e-19 97.8 112 45.5
BcaC05g25538 Brassica carinata HOM05D007364 ORTHO05D009275 2.0e-18 96.3 114 50.0
BcaB02g06675 Brassica carinata HOM05D007364 ORTHO05D009275 1.0e-17 94.0 95 52.6
Oeu047568.2 Olea europaea HOM05D007364 ORTHO05D009275 2.9e-17 92.4 120 48.3
HanXRQChr04g0125291 Helianthus annuus HOM05D007364 ORTHO05D009275 1.1e-16 90.5 121 47.9
Migut.I01209 Erythranthe guttata HOM05D007364 ORTHO05D009275 1.9e-16 89.7 130 40.8
Lj9P543T41 Lonicera japonica HOM05D007364 ORTHO05D009275 6.0e-15 84.7 102 49.0
HPP92_017099 Vanilla planifolia HOM05D007364 ORTHO05D009275 1.0e-14 84.0 150 39.3
HPP92_017109 Vanilla planifolia HOM05D007364 ORTHO05D009275 1.0e-14 84.0 119 44.5
SGA_v2.0_scaffold71G23970 Striga asiatica HOM05D007364 ORTHO05D009275 3.9e-14 82.0 138 37.7
SalBow6G2338 Salvia bowleyana HOM05D007364 ORTHO05D009275 6.7e-14 81.3 98 44.9
ECA232G2752 Erigeron canadensis HOM05D007364 ORTHO05D009275 1.9e-13 79.7 123 39.8
Atru.chr2.3597 Acer truncatum HOM05D007364 ORTHO05D009275 2.5e-13 79.3 71 52.1
Mapoly0061s0135 Marchantia polymorpha HOM05D007364 ORTHO05D009275 2.1e-12 76.3 117 37.6
Pp3c19_20210 Physcomitrium patens HOM05D007364 ORTHO05D009275 4.8e-12 75.1 150 34.7
AUR62015398 Chenopodium quinoa HOM05D007364 ORTHO05D009275 1.2e-07 60.5 70 40.0
AUR62040375 Chenopodium quinoa HOM05D007364 ORTHO05D009275 7.9e-07 57.8 69 39.1
SEGI_24559 Sequoiadendron giganteum HOM05D007364 ORTHO05D009275 2.3e-06 56.2 105 37.1


User provided reference genes

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