Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G256800 Phaseolus vulgaris HOM05D005879 ORTHO05D007432 6.6e-177 624.0 335 100.0
VMungo0251G0721 Vigna mungo HOM05D005879 ORTHO05D007432 2.0e-165 585.9 335 89.9
Glyma.08G134800 Glycine max HOM05D005879 ORTHO05D007432 3.0e-137 492.3 337 78.6
Lj4g0026645 Lotus japonicus HOM05D005879 ORTHO05D007432 7.4e-128 461.1 339 71.7
Glyma.05G177800 Glycine max HOM05D005879 ORTHO05D007432 5.9e-125 451.4 336 73.2
Ca_17743_v3 Cicer arietinum L. HOM05D005879 ORTHO05D007432 9.7e-120 434.1 341 67.7
TPR.G6200 Trifolium pratense HOM05D005879 ORTHO05D007432 1.8e-118 429.9 367 62.9
Medtr8g090180 Medicago truncatula HOM05D005879 ORTHO05D007432 2.2e-116 422.9 339 69.6
arahy.Tifrunner.gnm1.ann1.Y76I0L Arachis hypogaea HOM05D005879 ORTHO05D007432 9.4e-115 417.5 346 66.8
arahy.Tifrunner.gnm1.ann1.F9QSZL Arachis hypogaea HOM05D005879 ORTHO05D007432 1.5e-112 410.2 351 65.8
Lalb_Chr06g0163471 Lupinus albus HOM05D005879 ORTHO05D007432 1.7e-111 406.8 323 67.8
QL06p049237 Quercus lobata HOM05D005879 ORTHO05D007432 7.7e-109 397.9 343 65.6
Cfa017077 Carpinus fangiana HOM05D005879 ORTHO05D007432 6.8e-105 384.8 339 60.8
Haze_24910 Corylus avellana HOM05D005879 ORTHO05D007432 7.5e-104 381.3 332 60.8
Haze_24914 Corylus avellana HOM05D005879 ORTHO05D007432 7.5e-104 381.3 332 60.8
Prupe.6G188100 Prunus persica HOM05D005879 ORTHO05D007432 9.8e-104 380.9 331 60.4
TWI77G0137 Tripterygium wilfordii HOM05D005879 ORTHO05D007432 2.2e-103 379.8 331 59.8
MD05G1043000 Malus domestica HOM05D005879 ORTHO05D007432 1.4e-102 377.1 332 60.5
CiPaw.03G142700 Carya illinoinensis HOM05D005879 ORTHO05D007432 9.1e-102 374.4 335 58.5
Cpa.g.sc615.1 Carica papaya HOM05D005879 ORTHO05D007432 1.2e-101 374.0 324 59.3
Eucgr.B03900 Eucalyptus grandis HOM05D005879 ORTHO05D007432 2.0e-101 373.2 338 61.5
RcHm_v2.0_Chr2g0113151 Rosa chinensis HOM05D005879 ORTHO05D007432 1.7e-100 370.2 339 59.3
VMungo0540G1211 Vigna mungo HOM05D005879 ORTHO05D007432 1.7e-100 370.2 213 85.9
Gohir.A11G202400 Gossypium hirsutum HOM05D005879 ORTHO05D007432 1.1e-99 367.5 338 58.3
Atru.chr7.1487 Acer truncatum HOM05D005879 ORTHO05D007432 1.5e-99 367.1 330 59.4
CARHR246770 Cardamine hirsuta HOM05D005879 ORTHO05D007432 9.5e-99 364.4 326 60.1
Carub.0007s0187 Capsella rubella HOM05D005879 ORTHO05D007432 3.6e-98 362.5 332 57.8
FAN26G1261 Fragaria x ananassa HOM05D005879 ORTHO05D007432 3.6e-98 362.5 329 59.6
Manes.12G134100 Manihot esculenta HOM05D005879 ORTHO05D007432 4.7e-98 362.1 325 60.3
THA.LOC104807688 Tarenaya hassleriana HOM05D005879 ORTHO05D007432 6.1e-98 361.7 325 57.2
TWI81G0999 Tripterygium wilfordii HOM05D005879 ORTHO05D007432 8.0e-98 361.3 329 59.0
Gorai.007G237000 Gossypium raimondii HOM05D005879 ORTHO05D007432 2.3e-97 359.8 327 60.2
ClCG07G017360 Citrullus lanatus HOM05D005879 ORTHO05D007432 3.0e-97 359.4 328 56.4
Ciclev10020973m.g Citrus clementina HOM05D005879 ORTHO05D007432 3.0e-97 359.4 340 56.8
Gohir.D11G220800 Gossypium hirsutum HOM05D005879 ORTHO05D007432 3.0e-97 359.4 327 59.9
CsaV3_4G004590 Cucumis sativus L. HOM05D005879 ORTHO05D007432 5.2e-97 358.6 329 56.5
CsaV3_UNG120970 Cucumis sativus L. HOM05D005879 ORTHO05D007432 5.2e-97 358.6 329 56.5
CsaV3_UNG160200 Cucumis sativus L. HOM05D005879 ORTHO05D007432 5.2e-97 358.6 329 56.5
CsaV3_UNG223580 Cucumis sativus L. HOM05D005879 ORTHO05D007432 5.2e-97 358.6 329 56.5
FvH4_1g20700 Fragaria vesca HOM05D005879 ORTHO05D007432 6.8e-97 358.2 337 57.9
AL7G12180 Arabidopsis lyrata HOM05D005879 ORTHO05D007432 1.5e-96 357.1 329 57.8
Dinv21896 Davidia involucrata HOM05D005879 ORTHO05D007432 1.7e-95 353.6 336 56.2
COL.COLO4_27255 Corchorus olitorius HOM05D005879 ORTHO05D007432 2.8e-95 352.8 293 60.8
MELO3C017607.2 Cucumis melo HOM05D005879 ORTHO05D007432 3.1e-94 349.4 329 55.3
Nn2g14007 Nelumbo nucifera HOM05D005879 ORTHO05D007432 9.2e-94 347.8 336 55.4
Sed0022481 Sechium edule HOM05D005879 ORTHO05D007432 9.2e-94 347.8 327 56.3
Solyc05g052840.1 Solanum lycopersicum HOM05D005879 ORTHO05D007432 1.2e-93 347.4 332 58.1
Sopen05g031350 Solanum pennellii HOM05D005879 ORTHO05D007432 1.2e-93 347.4 332 58.1
PSO339G2019 Papaver somniferum HOM05D005879 ORTHO05D007432 1.6e-93 347.1 347 53.6
Potri.005G074700 Populus trichocarpa HOM05D005879 ORTHO05D007432 3.5e-93 345.9 335 55.8
TAR381G0927 Trochodendron aralioides HOM05D005879 ORTHO05D007432 3.5e-93 345.9 334 55.4
Cc07_g15080 Coffea canephora HOM05D005879 ORTHO05D007432 4.5e-93 345.5 336 58.3
PGSC0003DMG400027189 Solanum tuberosum HOM05D005879 ORTHO05D007432 4.5e-93 345.5 330 57.6
Sp7g35960 Schrenkiella parvula HOM05D005879 ORTHO05D007432 7.8e-93 344.7 337 56.7
Thecc.01G100600 Theobroma cacao HOM05D005879 ORTHO05D007432 7.8e-93 344.7 273 62.3
Duzib147G1529 Durio zibethinus HOM05D005879 ORTHO05D007432 1.0e-92 344.4 269 63.2
Aa31LG6G15340 Aethionema arabicum HOM05D005879 ORTHO05D007432 2.9e-92 342.8 328 54.9
PSO801G0022 Papaver somniferum HOM05D005879 ORTHO05D007432 8.6e-92 341.3 348 53.2
Nitab4.5_0009581g0010 Nicotiana tabacum HOM05D005879 ORTHO05D007432 1.5e-91 340.5 330 58.2
Hma1.2p1_0308F.1_g120270 Hydrangea macrophylla HOM05D005879 ORTHO05D007432 3.3e-91 339.3 342 55.3
AT4G39920 Arabidopsis thaliana HOM05D005879 ORTHO05D007432 4.3e-91 339.0 327 56.9
Sabra05G0061500 Salix brachista HOM05D005879 ORTHO05D007432 1.2e-90 337.4 339 54.0
MSTRG.3773 Avicennia marina HOM05D005879 ORTHO05D007432 2.3e-89 333.2 341 54.3
MBI05_g37046_MAGBIO Magnolia biondii HOM05D005879 ORTHO05D007432 3.0e-89 332.8 350 50.3
Thhalv10025595m.g Eutrema salsugineum HOM05D005879 ORTHO05D007432 5.2e-89 332.0 328 57.3
Ah.11g050680 Amaranthus hybridus HOM05D005879 ORTHO05D007432 1.2e-88 330.9 325 54.2
Peaxi162Scf00054g00186 Petunia axillaris HOM05D005879 ORTHO05D007432 2.0e-88 330.1 323 56.0
Sc05g0001510 Simmondsia chinensis HOM05D005879 ORTHO05D007432 2.6e-88 329.7 323 54.2
BraA03t15633Z Brassica rapa HOM05D005879 ORTHO05D007432 2.2e-87 326.6 326 54.6
CAN.G151.26 Capsicum annuum HOM05D005879 ORTHO05D007432 2.9e-87 326.2 326 54.9
PGR102G2441 Punica granatum HOM05D005879 ORTHO05D007432 2.9e-87 326.2 333 57.4
A03p65800 Brassica napus HOM05D005879 ORTHO05D007432 4.9e-87 325.5 326 54.3
Aqoxy3G00238 Aquilegia oxysepala HOM05D005879 ORTHO05D007432 8.3e-87 324.7 347 51.0
BolC7t46692H Brassica oleracea HOM05D005879 ORTHO05D007432 1.1e-86 324.3 346 52.6
PSO170G2230 Papaver somniferum HOM05D005879 ORTHO05D007432 1.1e-86 324.3 330 52.7
HanXRQChr17g0554861 Helianthus annuus HOM05D005879 ORTHO05D007432 1.4e-86 323.9 331 52.0
EL10Ac5g10569 Beta vulgaris HOM05D005879 ORTHO05D007432 1.8e-86 323.6 317 54.3
AUR62028624 Chenopodium quinoa HOM05D005879 ORTHO05D007432 3.2e-86 322.8 324 53.4
C07p62780 Brassica napus HOM05D005879 ORTHO05D007432 4.1e-86 322.4 346 54.9
AUR62008049 Chenopodium quinoa HOM05D005879 ORTHO05D007432 1.2e-85 320.9 322 53.1
vmacro12962 Vaccinium macrocarpon HOM05D005879 ORTHO05D007432 5.9e-85 318.5 353 51.0
ECA233G0618 Erigeron canadensis HOM05D005879 ORTHO05D007432 2.3e-84 316.6 323 51.4
Migut.L00135 Erythranthe guttata HOM05D005879 ORTHO05D007432 3.0e-84 316.2 335 53.1
Oeu032409.1 Olea europaea HOM05D005879 ORTHO05D007432 5.6e-83 312.0 336 53.6
Rhsim01G0133800 Rhododendron simsii HOM05D005879 ORTHO05D007432 7.3e-83 311.6 359 49.9
RhsimUnG0233600 Rhododendron simsii HOM05D005879 ORTHO05D007432 7.3e-83 311.6 359 49.9
Lsat_1_v5_gn_8_137181 Lactuca sativa HOM05D005879 ORTHO05D007432 1.2e-82 310.8 326 50.9
FAN19G0980 Fragaria x ananassa HOM05D005879 ORTHO05D007432 2.8e-82 309.7 294 56.5
SGA_v2.0_scaffold115G32189 Striga asiatica HOM05D005879 ORTHO05D007432 3.1e-81 306.2 343 52.2
SGA_v2.0_scaffold334G49051 Striga asiatica HOM05D005879 ORTHO05D007432 3.1e-81 306.2 343 52.2
DCAR_003483 Daucus carota HOM05D005879 ORTHO05D007432 8.9e-81 304.7 326 52.5
ATR0584G053 Amborella trichopoda HOM05D005879 ORTHO05D007432 2.6e-80 303.1 329 49.8
unitig_32.g10701 Utricularia gibba HOM05D005879 ORTHO05D007432 2.6e-80 303.1 332 53.0
vmacro17311 Vaccinium macrocarpon HOM05D005879 ORTHO05D007432 9.8e-80 301.2 325 52.3
SalBow7G4497 Salvia bowleyana HOM05D005879 ORTHO05D007432 6.0e-77 292.0 327 52.0
CDE04G0616 Ceratophyllum demersum HOM05D005879 ORTHO05D007432 2.3e-73 280.0 338 45.3
Zm00001eb243870 Zea mays HOM05D005879 ORTHO05D007432 1.7e-71 273.9 333 45.6
Psat7g055120 Pisum sativum HOM05D005879 ORTHO05D007432 6.4e-71 271.9 339 50.7
arahy.Tifrunner.gnm1.ann1.DH96WI Arachis hypogaea HOM05D005879 ORTHO05D007432 5.4e-70 268.9 302 54.3
HPP92_013925 Vanilla planifolia HOM05D005879 ORTHO05D007432 2.1e-69 266.9 339 45.1
Os02g0557000 Oryza sativa ssp. japonica HOM05D005879 ORTHO05D007432 1.3e-68 264.2 327 47.1
Hma1.2p1_0308F.1_g120280 Hydrangea macrophylla HOM05D005879 ORTHO05D007432 2.5e-67 260.0 189 67.2
Atru.chr11.1549 Acer truncatum HOM05D005879 ORTHO05D007432 4.0e-65 252.7 164 69.5
Mapoly0002s0046 Marchantia polymorpha HOM05D005879 ORTHO05D007432 1.2e-58 231.1 306 42.2
AagrBONN_evm.TU.Sc2ySwM_117.1918 Anthoceros agrestis HOM05D005879 ORTHO05D007432 2.8e-58 229.9 269 44.6
SMO143G0283 Selaginella moellendorffii HOM05D005879 ORTHO05D007432 2.4e-57 226.9 297 41.8
SEGI_25682 Sequoiadendron giganteum HOM05D005879 ORTHO05D007432 9.9e-56 221.5 204 53.4
FAN23G0004 Fragaria x ananassa HOM05D005879 ORTHO05D007432 1.3e-55 221.1 130 80.0
Pp3c13_2250 Physcomitrium patens HOM05D005879 ORTHO05D007432 2.1e-53 213.8 333 38.7
Atru.chr7.1491 Acer truncatum HOM05D005879 ORTHO05D007432 4.6e-53 212.6 242 54.1
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 1.1e-51 208.0 323 39.3
MD01G1031400 Malus domestica HOM05D005879 ORTHO05D007432 3.8e-47 193.0 129 70.5
Potri.007G093800 Populus trichocarpa HOM05D005879 ORTHO05D007432 3.0e-44 183.3 319 38.2
MCO11G662 Micromonas commoda HOM05D005879 ORTHO05D007432 4.8e-42 176.0 313 36.4
C03p78540 Brassica napus HOM05D005879 ORTHO05D007432 1.7e-39 167.5 304 38.5
Actinidia28237 Actinidia chinensis HOM05D005879 ORTHO05D007432 2.7e-37 160.2 111 68.5
BcaB03g12293 Brassica carinata HOM05D005879 ORTHO05D007432 6.0e-37 159.1 206 46.6
PRCOL_00003435 Prasinoderma coloniale HOM05D005879 ORTHO05D007432 3.1e-33 146.7 252 36.5
BolC3t20106H Brassica oleracea HOM05D005879 ORTHO05D007432 4.0e-33 146.4 304 36.5
Cre03.g200150 Chlamydomonas reinhardtii HOM05D005879 ORTHO05D007432 1.6e-26 124.4 143 42.7
Migut.L00117 Erythranthe guttata HOM05D005879 ORTHO05D007432 3.7e-26 123.2 86 68.6
HPP92_014012 Vanilla planifolia HOM05D005879 ORTHO05D007432 2.4e-25 120.6 234 36.8
MBI15_g14577_MAGBIO Magnolia biondii HOM05D005879 ORTHO05D007432 6.5e-23 112.5 79 63.3
BraA08t34278Z Brassica rapa HOM05D005879 ORTHO05D007432 8.5e-23 112.1 77 71.4
Hma1.2p1_0297F.1_g117050 Hydrangea macrophylla HOM05D005879 ORTHO05D007432 3.9e-20 103.2 90 63.3
BcaNung02300 Brassica carinata HOM05D005879 ORTHO05D007432 5.7e-19 99.4 143 46.2
A08p23210 Brassica napus HOM05D005879 ORTHO05D007432 2.6e-16 90.5 72 61.1
GSVIVG01004856001 Vitis vinifera HOM05D005879 ORTHO05D007432 3.4e-16 90.1 132 43.9
PRCOL_00004923 Prasinoderma coloniale HOM05D005879 ORTHO05D034414 1.9e-14 84.3 132 31.1
Medtr1g108500 Medicago truncatula HOM05D011368 ORTHO05D000135 1.5e-11 74.7 102 43.1
SEGI_41531 Sequoiadendron giganteum HOM05D005879 ORTHO05D007432 1.4e-09 68.2 145 33.8
Cfa025806 Carpinus fangiana HOM05D005879 ORTHO05D123935 1.7e-07 61.2 115 28.7
Pp3c4_21480 Physcomitrium patens HOM05D005879 ORTHO05D007432 5.5e-06 56.2 58 48.3


User provided reference genes

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