Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 2.0e-247 858.6 424 100.0
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 1.0e-222 776.5 418 90.9
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 6.6e-206 720.7 423 86.3
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 2.3e-190 669.1 425 78.6
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 1.9e-189 666.0 407 81.3
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 4.3e-189 664.8 394 82.7
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 5.6e-189 664.5 426 77.9
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 1.4e-187 659.8 397 81.6
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 1.2e-186 656.8 368 85.3
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 7.6e-186 654.1 427 76.6
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 2.1e-175 619.4 344 85.5
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 1.5e-173 613.2 434 70.0
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 1.6e-172 609.8 368 80.2
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 4.0e-171 605.1 426 69.7
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 2.0e-170 602.8 426 69.5
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 3.4e-170 602.1 426 69.7
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 3.8e-169 598.6 389 74.6
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 3.8e-169 598.6 401 72.8
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 3.8e-169 598.6 415 71.6
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 4.9e-169 598.2 410 73.4
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 6.4e-169 597.8 369 77.8
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 8.4e-169 597.4 365 78.1
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 8.4e-169 597.4 427 69.1
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 2.4e-168 595.9 393 73.8
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 2.4e-168 595.9 408 72.1
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 3.2e-168 595.5 383 74.9
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 4.2e-168 595.1 411 72.0
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 1.3e-166 590.1 428 69.2
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 1.8e-166 589.7 406 72.2
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 1.8e-163 579.7 381 72.2
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 2.4e-163 579.3 395 71.6
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 1.2e-162 577.0 374 72.7
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 8.4e-161 570.9 375 71.2
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 1.9e-160 569.7 407 68.1
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 9.3e-160 567.4 375 72.0
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 1.2e-159 567.0 375 72.0
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 1.6e-159 566.6 393 69.2
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 4.6e-159 565.1 392 68.6
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 3.0e-158 562.4 383 68.4
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 3.9e-158 562.0 389 70.4
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 1.9e-157 559.7 416 67.5
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 2.5e-157 559.3 383 68.1
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 3.3e-157 558.9 393 68.7
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 5.6e-157 558.1 368 72.6
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 9.6e-157 557.4 383 68.1
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 1.3e-156 557.0 394 67.5
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 2.1e-156 556.2 392 67.6
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 2.8e-156 555.8 385 69.9
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 3.1e-155 552.4 387 68.5
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 3.1e-155 552.4 378 69.0
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 5.3e-155 551.6 371 70.9
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 2.6e-154 549.3 375 69.6
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 5.8e-154 548.1 369 70.2
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 1.0e-153 547.4 393 66.7
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 1.3e-153 547.0 376 69.9
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 1.3e-153 547.0 377 68.7
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 3.8e-153 545.4 395 66.6
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 6.5e-153 544.7 347 73.8
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.1e-152 543.9 443 65.0
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 9.3e-152 540.8 369 69.4
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 3.0e-150 535.8 392 67.9
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 3.9e-150 535.4 424 63.9
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 3.9e-150 535.4 406 68.0
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 1.1e-149 533.9 359 69.1
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 3.3e-149 532.3 387 66.9
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 4.3e-149 531.9 461 60.7
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 2.2e-148 529.6 396 63.6
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 2.8e-148 529.3 358 69.0
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 2.8e-148 529.3 379 67.8
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 2.0e-146 523.1 348 72.4
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 4.5e-146 521.9 386 65.3
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 4.5e-146 521.9 406 65.8
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 2.5e-144 516.2 409 64.5
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 3.6e-143 512.3 413 63.2
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 1.2e-138 497.3 401 60.3
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 2.0e-138 496.5 343 70.8
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 2.0e-138 496.5 360 65.0
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 7.2e-136 488.0 391 62.9
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 9.4e-136 487.6 501 52.1
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 1.8e-131 473.4 367 62.4
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 3.0e-126 456.1 354 64.7
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 2.6e-122 443.0 313 68.4
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 2.7e-119 433.0 359 58.2
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 5.2e-118 428.7 434 54.8
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 1.7e-116 423.7 358 54.7
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 2.9e-113 412.9 411 53.8
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.9e-112 410.2 406 55.7
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 3.8e-105 386.0 358 50.6
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 4.2e-104 382.5 347 52.7
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 2.0e-101 373.6 257 66.5
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 1.3e-100 370.9 416 51.4
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 1.7e-100 370.5 257 66.1
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 2.8e-100 369.8 334 52.7
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 6.0e-90 335.5 302 56.3
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 4.3e-80 302.8 326 49.7
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 5.4e-67 259.2 382 38.7
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 3.0e-65 253.4 361 44.0
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 3.4e-53 213.4 129 78.3
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 3.5e-50 203.4 130 72.3
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 3.3e-40 170.2 183 49.2
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 4.3e-40 169.9 151 57.6
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 1.2e-37 161.8 108 70.4
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 2.0e-24 117.9 99 62.6
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 4.3e-24 116.7 125 49.6
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 5.7e-24 116.3 79 63.3
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 1.7e-23 114.8 112 49.1
PRCOL_00004673 Prasinoderma coloniale HOM05D006894 ORTHO05D008724 4.8e-23 113.2 365 26.8
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 6.3e-23 112.8 168 38.7
Solyc09g015460.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 1.2e-21 108.6 67 73.1
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 4.5e-21 106.7 83 66.3
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 1.1e-19 102.1 78 65.4
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 5.1e-17 93.2 178 34.8
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 8.8e-17 92.4 78 60.3
CDE06G1775 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 2.0e-16 91.3 224 30.4
Cpa.g.sc3656.1 Carica papaya HOM05D006894 ORTHO05D008724 1.2e-13 82.0 63 58.7
Peaxi162Scf01350g00016 Petunia axillaris HOM05D006894 ORTHO05D008724 1.0e-12 79.0 52 73.1
Lj1A1232G87 Lonicera japonica HOM05D004784 ORTHO05D005762 1.2e-10 72.0 337 25.8


User provided reference genes

Program Settings