Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G240600 Phaseolus vulgaris HOM05D006509 ORTHO05D008144 9.3e-181 636.7 316 100.0
VMungo0251G2215 Vigna mungo HOM05D006509 ORTHO05D008144 1.5e-162 576.2 317 89.9
Glyma.05G160301 Glycine max HOM05D006509 ORTHO05D008144 1.4e-147 526.6 319 83.4
Ca_17903_v3 Cicer arietinum L. HOM05D006509 ORTHO05D008144 6.1e-124 448.0 324 71.3
Lj4g0012507 Lotus japonicus HOM05D006509 ORTHO05D008144 2.3e-123 446.0 319 74.3
arahy.Tifrunner.gnm1.ann1.LJ2JSE Arachis hypogaea HOM05D006509 ORTHO05D008144 9.2e-120 434.1 322 69.6
arahy.Tifrunner.gnm1.ann1.6728UU Arachis hypogaea HOM05D006509 ORTHO05D008144 4.5e-119 431.8 323 69.0
arahy.Tifrunner.gnm1.ann1.IV5K9E Arachis hypogaea HOM05D006509 ORTHO05D008144 2.9e-118 429.1 327 68.2
arahy.Tifrunner.gnm1.ann1.4V51TJ Arachis hypogaea HOM05D006509 ORTHO05D008144 1.5e-117 426.8 324 68.2
TPR.G6737 Trifolium pratense HOM05D006509 ORTHO05D008144 1.9e-117 426.4 326 68.1
Medtr8g086630 Medicago truncatula HOM05D006509 ORTHO05D008144 5.6e-117 424.9 323 71.2
Lalb_Chr13g0295231 Lupinus albus HOM05D006509 ORTHO05D008144 4.9e-113 411.8 319 68.7
CANSAT56G2102 Cannabis sativa HOM05D006509 ORTHO05D008144 1.9e-96 356.7 320 58.8
TAR629G0624 Trochodendron aralioides HOM05D006509 ORTHO05D008144 4.6e-95 352.1 331 56.5
RcHm_v2.0_Chr1g0363071 Rosa chinensis HOM05D006509 ORTHO05D008144 6.0e-95 351.7 324 56.8
Atru.chr11.1320 Acer truncatum HOM05D006509 ORTHO05D008144 3.0e-94 349.4 240 68.8
Ciclev10032158m.g Citrus clementina HOM05D006509 ORTHO05D008144 3.0e-94 349.4 248 68.1
Atru.chr11.1232 Acer truncatum HOM05D006509 ORTHO05D008144 3.9e-94 349.0 240 68.8
FAN06G0528 Fragaria x ananassa HOM05D006509 ORTHO05D008144 3.9e-94 349.0 323 56.7
FvH4_7g19250 Fragaria vesca HOM05D006509 ORTHO05D008144 5.1e-94 348.6 323 56.3
Nn1g04452 Nelumbo nucifera HOM05D006509 ORTHO05D008144 9.6e-93 344.4 299 58.5
FAN01G2825 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.2e-92 344.0 323 55.7
FAN03G0898 Fragaria x ananassa HOM05D006509 ORTHO05D008144 4.7e-92 342.0 290 59.3
GSVIVG01010764001 Vitis vinifera HOM05D006509 ORTHO05D008144 4.7e-92 342.0 320 60.0
Psat7g069200 Pisum sativum HOM05D006509 ORTHO05D008144 1.4e-91 340.5 323 56.0
MD01G1107600 Malus domestica HOM05D006509 ORTHO05D008144 3.1e-91 339.3 319 56.1
Manes.09G055500 Manihot esculenta HOM05D006509 ORTHO05D008144 6.8e-91 338.2 331 55.3
Sed0013319 Sechium edule HOM05D006509 ORTHO05D008144 2.6e-90 336.3 233 67.8
ClCG09G005710 Citrullus lanatus HOM05D006509 ORTHO05D008144 2.2e-89 333.2 244 64.3
Nitab4.5_0002192g0100 Nicotiana tabacum HOM05D006509 ORTHO05D008144 6.4e-89 331.6 244 66.8
Eucgr.G02566 Eucalyptus grandis HOM05D006509 ORTHO05D008144 8.4e-89 331.3 277 61.0
Peaxi162Scf00818g00020 Petunia axillaris HOM05D006509 ORTHO05D008144 8.4e-89 331.3 244 65.6
Thecc.01G136400 Theobroma cacao HOM05D006509 ORTHO05D008144 1.4e-88 330.5 330 55.5
Cfa008714 Carpinus fangiana HOM05D006509 ORTHO05D008144 3.2e-88 329.3 324 54.3
Duzib264G0706 Durio zibethinus HOM05D006509 ORTHO05D008144 5.4e-88 328.6 320 55.3
Prupe.2G212300 Prunus persica HOM05D006509 ORTHO05D008144 2.7e-87 326.2 317 54.6
CAN.G157.10 Capsicum annuum HOM05D006509 ORTHO05D008144 4.6e-87 325.5 283 59.4
CsaV3_7G029430 Cucumis sativus L. HOM05D006509 ORTHO05D008144 4.6e-87 325.5 231 67.1
Gorai.010G244900 Gossypium raimondii HOM05D006509 ORTHO05D008144 7.8e-87 324.7 327 54.4
Sp3g17820 Schrenkiella parvula HOM05D006509 ORTHO05D008144 1.0e-86 324.3 329 54.4
Haze_11724 Corylus avellana HOM05D006509 ORTHO05D008144 1.3e-86 323.9 249 62.7
CSS0015169 Camellia sinensis var. sinensis HOM05D006509 ORTHO05D008144 2.3e-86 323.2 324 52.8
C05p44930 Brassica napus HOM05D006509 ORTHO05D008144 3.9e-86 322.4 244 64.3
BolC5t33216H Brassica oleracea HOM05D006509 ORTHO05D008144 3.9e-86 322.4 244 64.3
PSO017G6086 Papaver somniferum HOM05D006509 ORTHO05D008144 3.9e-86 322.4 333 52.3
BcaC05g28409 Brassica carinata HOM05D006509 ORTHO05D008144 5.1e-86 322.0 244 63.9
Gohir.D13G187200 Gossypium hirsutum HOM05D006509 ORTHO05D008144 6.6e-86 321.6 329 54.4
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.9e-85 320.1 307 55.4
Hma1.2p1_1005F.1_g246910 Hydrangea macrophylla HOM05D006509 ORTHO05D008144 1.9e-85 320.1 233 67.0
THA.LOC104800032 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 5.6e-85 318.5 265 60.8
PSO478G1783 Papaver somniferum HOM05D006509 ORTHO05D008144 9.6e-85 317.8 331 52.0
PGSC0003DMG400019835 Solanum tuberosum HOM05D006509 ORTHO05D008144 9.6e-85 317.8 253 63.2
CDE04G0697 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 1.3e-84 317.4 230 64.3
BraA05t21822Z Brassica rapa HOM05D006509 ORTHO05D008144 1.6e-84 317.0 244 63.1
Carub.0003s1969 Capsella rubella HOM05D006509 ORTHO05D008144 1.6e-84 317.0 237 65.4
TWI74G1084 Tripterygium wilfordii HOM05D006509 ORTHO05D008144 1.6e-84 317.0 225 66.2
Gohir.A13G179100 Gossypium hirsutum HOM05D006509 ORTHO05D008144 2.1e-84 316.6 226 68.1
A05p29310 Brassica napus HOM05D006509 ORTHO05D008144 2.8e-84 316.2 232 65.5
DCAR_030403 Daucus carota HOM05D006509 ORTHO05D008144 2.8e-84 316.2 322 53.4
CDE07G1911 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 4.8e-84 315.5 231 64.1
Hund08535 Selenicereus undatus HOM05D006509 ORTHO05D008144 4.8e-84 315.5 313 51.4
Sc06g0007860 Simmondsia chinensis HOM05D006509 ORTHO05D008144 4.8e-84 315.5 238 65.5
QL03p043626 Quercus lobata HOM05D006509 ORTHO05D008144 1.1e-83 314.3 322 54.0
EL10Ac9g22921 Beta vulgaris HOM05D006509 ORTHO05D008144 1.4e-83 313.9 242 62.4
THA.LOC104814131 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 1.4e-83 313.9 264 59.8
BcaB06g26050 Brassica carinata HOM05D006509 ORTHO05D008144 1.8e-83 313.5 326 52.8
HanXRQChr06g0171951 Helianthus annuus HOM05D006509 ORTHO05D008144 3.1e-83 312.8 312 54.2
Lsat_1_v5_gn_3_32880 Lactuca sativa HOM05D006509 ORTHO05D008144 4.0e-83 312.4 254 60.6
PGR004G1007 Punica granatum HOM05D006509 ORTHO05D008144 5.3e-83 312.0 323 51.1
CiPaw.05G167100 Carya illinoinensis HOM05D006509 ORTHO05D008144 6.9e-83 311.6 328 53.4
Gohir.A09G005300 Gossypium hirsutum HOM05D006509 ORTHO05D008144 6.9e-83 311.6 323 54.5
vmacro14294 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 6.9e-83 311.6 270 57.8
vmacro23064 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 6.9e-83 311.6 270 57.8
Thhalv10021111m.g Eutrema salsugineum HOM05D006509 ORTHO05D008144 9.0e-83 311.2 239 64.4
CARHR095320 Cardamine hirsuta HOM05D006509 ORTHO05D008144 1.5e-82 310.5 330 52.4
Medtr4g086490 Medicago truncatula HOM05D000001 ORTHO05D000003 5.8e-82 308.5 282 64.2
MSTRG.22733 Avicennia marina HOM05D006509 ORTHO05D008144 9.9e-82 307.8 245 62.0
Aa31LG8G6580 Aethionema arabicum HOM05D006509 ORTHO05D008144 1.3e-81 307.4 266 60.5
Solyc02g021050.3 Solanum lycopersicum HOM05D006509 ORTHO05D008144 1.3e-81 307.4 253 60.9
Gorai.006G006200 Gossypium raimondii HOM05D006509 ORTHO05D008144 1.7e-81 307.0 324 54.3
Gohir.D09G004600 Gossypium hirsutum HOM05D006509 ORTHO05D008144 2.2e-81 306.6 323 53.9
AT3G19810 Arabidopsis thaliana HOM05D006509 ORTHO05D008144 2.9e-81 306.2 234 65.4
Sopen02g005330 Solanum pennellii HOM05D006509 ORTHO05D008144 2.9e-81 306.2 253 60.9
SGA_v2.0_scaffold5G02679 Striga asiatica HOM05D006509 ORTHO05D008144 1.1e-80 304.3 278 55.0
AL3G33260 Arabidopsis lyrata HOM05D006509 ORTHO05D008144 1.4e-80 303.9 334 51.8
Migut.I00780 Erythranthe guttata HOM05D006509 ORTHO05D008144 1.9e-80 303.5 238 60.1
SalBow2G3295 Salvia bowleyana HOM05D006509 ORTHO05D008144 5.4e-80 302.0 231 62.3
Aqoxy4G00161 Aquilegia oxysepala HOM05D006509 ORTHO05D008144 1.3e-78 297.4 240 61.2
Actinidia04136 Actinidia chinensis HOM05D006509 ORTHO05D008144 3.9e-78 295.8 313 50.8
MBI06_g12322_MAGBIO Magnolia biondii HOM05D006509 ORTHO05D008144 8.7e-78 294.7 225 61.8
Potri.010G170100 Populus trichocarpa HOM05D006509 ORTHO05D008144 9.6e-77 291.2 320 50.9
Sabra10G0129900 Salix brachista HOM05D006509 ORTHO05D008144 1.3e-76 290.8 275 54.9
AUR62014967 Chenopodium quinoa HOM05D003778 ORTHO05D004418 1.4e-75 287.3 209 66.5
Rhsim01G0196900 Rhododendron simsii HOM05D006509 ORTHO05D008144 6.9e-75 285.0 384 45.8
Lj6C721T21 Lonicera japonica HOM05D006509 ORTHO05D008144 2.2e-73 280.0 327 48.6
AUR62017665 Chenopodium quinoa HOM05D006509 ORTHO05D008144 3.8e-73 279.3 325 49.8
MELO3C015985.2 Cucumis melo HOM05D006509 ORTHO05D008144 4.2e-72 275.8 207 65.7
ATR0618G169 Amborella trichopoda HOM05D006509 ORTHO05D008144 9.3e-72 274.6 244 55.3
Migut.I00779 Erythranthe guttata HOM05D006509 ORTHO05D008144 8.7e-70 268.1 238 54.6
Os02g0831200 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 2.1e-60 236.9 233 51.1
Glyma.08G117902 Glycine max HOM05D006509 ORTHO05D008144 1.4e-59 234.2 150 76.7
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 9.0e-59 231.5 164 66.5
Zm00001eb259480 Zea mays HOM05D006509 ORTHO05D008144 5.7e-53 212.2 237 50.2
AUR62015202 Chenopodium quinoa HOM05D006509 ORTHO05D008144 2.0e-50 203.8 158 62.7
Mapoly0002s0264 Marchantia polymorpha HOM05D006509 ORTHO05D008144 1.1e-48 198.0 246 44.3
Pp3c4_29820 Physcomitrium patens HOM05D006509 ORTHO05D008144 1.1e-48 198.0 245 41.2
COL.COLO4_35800 Corchorus olitorius HOM05D006509 ORTHO05D008144 6.1e-47 192.2 142 68.3
SEGI_30002 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 8.8e-46 188.3 235 44.3
SEGI_16170 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 9.7e-45 184.9 237 44.3
AUR62014968 Chenopodium quinoa HOM05D006509 ORTHO05D008144 1.3e-44 184.5 139 63.3
unitig_747.g21717 Utricularia gibba HOM05D006509 ORTHO05D008144 2.2e-44 183.7 154 57.1
Dinv39609 Davidia involucrata HOM05D006509 ORTHO05D008144 5.3e-43 179.1 135 63.7
CBR_g57847 Chara braunii HOM05D006509 ORTHO05D008144 3.8e-41 172.9 237 38.4
Cc03_g14920 Coffea canephora HOM05D006509 ORTHO05D008144 3.2e-40 169.9 134 56.7
FAN10G0955 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.4e-38 164.5 184 53.3
Cpa.g.sc63.3 Carica papaya HOM05D006509 ORTHO05D008144 1.7e-36 157.5 190 48.9
Cc00_g35200 Coffea canephora HOM05D006509 ORTHO05D008144 5.0e-33 146.0 192 45.3
ECA246G0117 Erigeron canadensis HOM05D006509 ORTHO05D008144 1.1e-32 144.8 126 60.3
AUR62018171 Chenopodium quinoa HOM05D006509 ORTHO05D008144 4.2e-32 142.9 105 65.7
Oeu049185.1 Olea europaea HOM05D006509 ORTHO05D008144 6.1e-31 139.0 107 64.5
Os04g0108300 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 2.0e-29 134.0 138 45.7
AagrBONN_evm.TU.Sc2ySwM_362.2130 Anthoceros agrestis HOM05D006509 ORTHO05D008144 7.0e-27 125.6 179 41.3
Ca_19971_v3 Cicer arietinum L. HOM05D000020 ORTHO05D000156 4.0e-22 109.8 74 75.7
FAN01G0805 Fragaria x ananassa HOM05D006509 ORTHO05D008144 7.7e-18 95.5 64 76.6
Oeu033605.1 Olea europaea HOM05D006509 ORTHO05D008144 8.3e-12 75.5 75 53.3


User provided reference genes

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