Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G236200 Phaseolus vulgaris HOM05D007073 ORTHO05D008855 1.7e-58 229.2 122 100.0
VMungo0251G2135 Vigna mungo HOM05D007073 ORTHO05D008855 2.0e-54 215.7 122 95.1
Glyma.08G113800 Glycine max HOM05D007073 ORTHO05D008855 3.3e-49 198.4 118 90.7
Lj4g0003370 Lotus japonicus HOM05D007073 ORTHO05D008855 2.1e-48 195.7 118 88.1
Glyma.05G155900 Glycine max HOM05D007073 ORTHO05D008855 3.4e-46 188.3 113 89.4
Lalb_Chr12g0205331 Lupinus albus HOM05D007073 ORTHO05D008855 6.4e-45 184.1 113 85.8
TPR.G24371 Trifolium pratense HOM05D007073 ORTHO05D008855 1.1e-44 183.3 113 85.0
Ca_17949_v3 Cicer arietinum L. HOM05D007073 ORTHO05D008855 1.4e-44 183.0 112 84.8
arahy.Tifrunner.gnm1.ann1.0LW32C Arachis hypogaea HOM05D007073 ORTHO05D008855 2.3e-42 175.6 120 81.7
Psat7g072280 Pisum sativum HOM05D007073 ORTHO05D008855 2.3e-42 175.6 112 81.2
Medtr8g085700 Medicago truncatula HOM05D007073 ORTHO05D008855 9.5e-41 170.2 120 75.8
CSS0049768 Camellia sinensis var. sinensis HOM05D007073 ORTHO05D008855 1.4e-39 166.4 113 76.1
arahy.Tifrunner.gnm1.ann1.F1G2D9 Arachis hypogaea HOM05D007073 ORTHO05D008855 5.2e-39 164.5 146 66.4
Atru.chr13.338 Acer truncatum HOM05D007073 ORTHO05D008855 2.0e-38 162.5 115 71.3
Dinv31819 Davidia involucrata HOM05D007073 ORTHO05D008855 2.6e-38 162.2 115 74.8
RcHm_v2.0_Chr6g0272121 Rosa chinensis HOM05D007073 ORTHO05D008855 2.6e-38 162.2 111 74.8
GSVIVG01009840001 Vitis vinifera HOM05D007073 ORTHO05D008855 2.6e-38 162.2 115 73.0
Haze_22602 Corylus avellana HOM05D000624 ORTHO05D000495 7.6e-38 160.6 108 75.9
FvH4_5g30190 Fragaria vesca HOM05D007073 ORTHO05D008855 9.9e-38 160.2 111 74.8
Sabra05G0182000 Salix brachista HOM05D007073 ORTHO05D008855 2.2e-37 159.1 114 71.9
TAR628G0116 Trochodendron aralioides HOM05D007073 ORTHO05D008855 4.9e-37 157.9 115 71.3
Potri.005G235800 Populus trichocarpa HOM05D007073 ORTHO05D008855 8.3e-37 157.1 114 71.1
CANSAT25G0010 Cannabis sativa HOM05D007073 ORTHO05D008855 1.1e-36 156.8 107 74.8
Hma1.2p1_0773F.1_g216240 Hydrangea macrophylla HOM05D007073 ORTHO05D008855 1.1e-36 156.8 115 71.3
Solyc04g081160.3 Solanum lycopersicum HOM05D007073 ORTHO05D008855 1.1e-36 156.8 111 72.1
Sopen04g034780 Solanum pennellii HOM05D007073 ORTHO05D008855 1.1e-36 156.8 111 72.1
COL.COLO4_26179 Corchorus olitorius HOM05D007073 ORTHO05D008855 1.4e-36 156.4 115 68.7
QL02p010904 Quercus lobata HOM05D007073 ORTHO05D008855 2.4e-36 155.6 114 69.3
Duzib093G1738 Durio zibethinus HOM05D007073 ORTHO05D008855 3.2e-36 155.2 115 67.8
HanXRQChr02g0044001 Helianthus annuus HOM05D007073 ORTHO05D008855 3.2e-36 155.2 111 73.0
Peaxi162Scf00287g01620 Petunia axillaris HOM05D007073 ORTHO05D008855 4.1e-36 154.8 111 71.2
PGSC0003DMG400003718 Solanum tuberosum HOM05D007073 ORTHO05D008855 5.4e-36 154.5 111 71.2
Manes.18G016450 Manihot esculenta HOM05D007073 ORTHO05D008855 7.1e-36 154.1 115 69.6
Eucgr.H01040 Eucalyptus grandis HOM05D007073 ORTHO05D008855 9.2e-36 153.7 112 70.5
Eucgr.L01253 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.2e-35 153.3 112 70.5
Nn5g29254 Nelumbo nucifera HOM05D007073 ORTHO05D008855 2.1e-35 152.5 110 71.8
RhsimUnG0148500 Rhododendron simsii HOM05D007073 ORTHO05D008855 2.1e-35 152.5 113 70.8
Cc04_g14740 Coffea canephora HOM05D007073 ORTHO05D008855 2.7e-35 152.1 111 71.2
PGR031G0624 Punica granatum HOM05D007073 ORTHO05D008855 2.7e-35 152.1 111 71.2
RcHm_v2.0_Chr6g0302381 Rosa chinensis HOM05D007073 ORTHO05D008855 2.7e-35 152.1 111 72.1
AUR62019145 Chenopodium quinoa HOM05D007073 ORTHO05D008855 3.5e-35 151.8 111 70.3
Lsat_1_v5_gn_1_16141 Lactuca sativa HOM05D007073 ORTHO05D008855 7.8e-35 150.6 114 70.2
CANSAT11G0546 Cannabis sativa HOM05D007073 ORTHO05D008855 1.0e-34 150.2 105 71.4
CAN.G1271.5 Capsicum annuum HOM05D007073 ORTHO05D008855 1.0e-34 150.2 111 70.3
TWI56G0686 Tripterygium wilfordii HOM05D007073 ORTHO05D008855 1.3e-34 149.8 114 68.4
Zm00001eb001980 Zea mays HOM05D007073 ORTHO05D008855 1.3e-34 149.8 113 71.7
PSO675G5408 Papaver somniferum HOM05D007073 ORTHO05D008855 1.7e-34 149.4 117 68.4
BcaC05g27117 Brassica carinata HOM05D007073 ORTHO05D008855 3.0e-34 148.7 111 70.3
BcaC05g27119 Brassica carinata HOM05D007073 ORTHO05D008855 3.0e-34 148.7 111 70.3
C05p29970 Brassica napus HOM05D007073 ORTHO05D008855 3.0e-34 148.7 111 70.3
BolC5t31732H Brassica oleracea HOM05D007073 ORTHO05D008855 3.0e-34 148.7 111 70.3
BolC5t31736H Brassica oleracea HOM05D007073 ORTHO05D008855 3.0e-34 148.7 111 70.3
ClCG08G014440 Citrullus lanatus HOM05D007073 ORTHO05D008855 3.9e-34 148.3 111 67.6
Zm00001eb403590 Zea mays HOM05D007073 ORTHO05D008855 3.9e-34 148.3 113 72.6
A09p35370 Brassica napus HOM05D007073 ORTHO05D008855 5.1e-34 147.9 111 69.4
PSO541G6379 Papaver somniferum HOM05D007073 ORTHO05D008855 5.1e-34 147.9 117 67.5
Sed0011824 Sechium edule HOM05D007073 ORTHO05D008855 5.1e-34 147.9 111 67.6
Cc02_g29940 Coffea canephora HOM05D007073 ORTHO05D008855 6.6e-34 147.5 111 68.5
CARHR030330 Cardamine hirsuta HOM05D007073 ORTHO05D008855 8.6e-34 147.1 111 68.5
ECA247G1834 Erigeron canadensis HOM05D007073 ORTHO05D008855 1.1e-33 146.7 112 67.0
Sc26g0003150 Simmondsia chinensis HOM05D007073 ORTHO05D008855 1.5e-33 146.4 110 68.2
vmacro21707 Vaccinium macrocarpon HOM05D007073 ORTHO05D008855 1.5e-33 146.4 108 70.4
CANSAT11G2499 Cannabis sativa HOM05D007073 ORTHO05D008855 1.9e-33 146.0 104 71.2
Carub.0001s2918 Capsella rubella HOM05D007073 ORTHO05D008855 2.5e-33 145.6 111 68.5
EL10Ac1g00450 Beta vulgaris HOM05D007073 ORTHO05D008855 4.3e-33 144.8 122 63.9
BcaB07g32745 Brassica carinata HOM05D007073 ORTHO05D008855 5.6e-33 144.4 109 69.7
Thhalv10009135m.g Eutrema salsugineum HOM05D007073 ORTHO05D008855 7.3e-33 144.1 111 67.6
SalBow7G2056 Salvia bowleyana HOM05D007073 ORTHO05D008855 9.6e-33 143.7 111 65.8
THA.LOC104810648 Tarenaya hassleriana HOM05D007073 ORTHO05D008855 9.6e-33 143.7 110 68.2
Migut.C00802 Erythranthe guttata HOM05D007073 ORTHO05D008855 2.1e-32 142.5 111 68.5
Sp1g26740 Schrenkiella parvula HOM05D007073 ORTHO05D008855 4.7e-32 141.4 111 66.7
CsaV3_2G029360 Cucumis sativus L. HOM05D007073 ORTHO05D008855 6.2e-32 141.0 111 64.9
SGA_v2.0_scaffold92G28274 Striga asiatica HOM05D007073 ORTHO05D008855 6.2e-32 141.0 111 66.7
CDE08G0828 Ceratophyllum demersum HOM05D007073 ORTHO05D008855 8.1e-32 140.6 106 67.0
Oeu054729.1 Olea europaea HOM05D007073 ORTHO05D008855 1.1e-31 140.2 106 68.9
unitig_32.g11146 Utricularia gibba HOM05D007073 ORTHO05D008855 1.4e-31 139.8 108 69.4
Aa31LG6G9870 Aethionema arabicum HOM05D007073 ORTHO05D008855 1.8e-31 139.4 110 67.3
MD08G1016500 Malus domestica HOM05D007073 ORTHO05D008855 1.8e-31 139.4 111 64.9
Rhsim06G0025500 Rhododendron simsii HOM05D000624 ORTHO05D000495 3.1e-31 138.7 100 72.0
AT1G30845 Arabidopsis thaliana HOM05D007073 ORTHO05D008855 5.2e-31 137.9 111 65.8
ATR0945G003 Amborella trichopoda HOM05D007073 ORTHO05D008855 6.8e-31 137.5 107 66.4
HPP92_025607 Vanilla planifolia HOM05D007073 ORTHO05D008855 1.5e-30 136.3 115 63.5
SGA_v2.0_scaffold92G28275 Striga asiatica HOM05D007073 ORTHO05D008855 2.0e-30 136.0 109 66.1
MSTRG.1215 Avicennia marina HOM05D007073 ORTHO05D008855 8.4e-29 130.6 109 60.6
Cfa013916 Carpinus fangiana HOM05D007073 ORTHO05D008855 1.9e-28 129.4 85 78.8
MD15G1015600 Malus domestica HOM05D007073 ORTHO05D008855 1.9e-28 129.4 111 61.3
Prupe.1G369500 Prunus persica HOM05D007073 ORTHO05D008855 1.6e-27 126.3 88 72.7
C05p29960 Brassica napus HOM05D007073 ORTHO05D008855 2.1e-27 125.9 95 68.4
Gohir.D01G101000 Gossypium hirsutum HOM05D007073 ORTHO05D008855 2.1e-27 125.9 87 71.3
FAN13G2867 Fragaria x ananassa HOM05D007073 ORTHO05D008855 2.7e-27 125.6 87 75.9
Gohir.A01G112900 Gossypium hirsutum HOM05D007073 ORTHO05D008855 4.6e-27 124.8 87 72.4
CiPaw.07G153100 Carya illinoinensis HOM05D007073 ORTHO05D008855 6.0e-27 124.4 87 74.7
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 7.8e-27 124.0 83 77.1
Actinidia26593 Actinidia chinensis HOM05D007073 ORTHO05D008855 3.0e-26 122.1 93 69.9
Ciclev10002853m.g Citrus clementina HOM05D007073 ORTHO05D008855 1.5e-25 119.8 103 61.2
Peaxi162Scf01591g00005 Petunia axillaris HOM05D007073 ORTHO05D008855 1.9e-25 119.4 83 73.5
Nitab4.5_0005185g0010 Nicotiana tabacum HOM05D007073 ORTHO05D008855 5.6e-25 117.9 82 73.2
AL1G45120 Arabidopsis lyrata HOM05D007073 ORTHO05D008855 1.3e-24 116.7 171 42.7
AUR62014408 Chenopodium quinoa HOM05D007073 ORTHO05D008855 1.3e-24 116.7 81 74.1
Actinidia37317 Actinidia chinensis HOM05D007073 ORTHO05D008855 3.6e-24 115.2 82 72.0
Thecc.08G038900 Theobroma cacao HOM05D007073 ORTHO05D008855 4.8e-24 114.8 87 67.8
MELO3C010995.2 Cucumis melo HOM05D007073 ORTHO05D008855 2.4e-23 112.5 84 66.7
SEGI_10735 Sequoiadendron giganteum HOM05D007073 ORTHO05D008855 3.1e-23 112.1 114 57.0
Os03g0127000 Oryza sativa ssp. japonica HOM05D007073 ORTHO05D008855 1.5e-22 109.8 81 71.6
Aqoxy6G02335_Aqoxy6G02336 Aquilegia oxysepala HOM05D000558 ORTHO05D001857 4.4e-22 108.2 81 69.1
Eucgr.H01037 Eucalyptus grandis HOM05D007073 ORTHO05D008855 4.9e-21 104.8 84 66.7
C05p30020 Brassica napus HOM05D007073 ORTHO05D008855 7.9e-19 97.4 82 61.0
Mapoly0121s0038 Marchantia polymorpha HOM05D007073 ORTHO05D008855 1.7e-18 96.3 111 51.4
DCAR_017499 Daucus carota HOM05D007073 ORTHO05D008855 1.6e-16 89.7 64 71.9
MD13G1087600 Malus domestica HOM05D007073 ORTHO05D008855 2.8e-16 89.0 79 59.5
arahy.Tifrunner.gnm1.ann1.JR36LC Arachis hypogaea HOM05D007073 ORTHO05D008855 1.1e-15 87.0 62 77.4
BolC5t31739H Brassica oleracea HOM05D007073 ORTHO05D008855 3.1e-15 85.5 70 62.9
Pp3c8_14860 Physcomitrium patens HOM05D007073 ORTHO05D008855 9.9e-14 80.5 108 48.1
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 2.2e-13 79.3 52 76.9
Eucgr.L01259 Eucalyptus grandis HOM05D007073 ORTHO05D008855 2.9e-13 79.0 49 77.6
Actinidia04603 Actinidia chinensis HOM05D007073 ORTHO05D008855 7.9e-11 70.9 58 65.5
AagrBONN_evm.TU.Sc2ySwM_344.4448 Anthoceros agrestis HOM05D007073 ORTHO05D008855 1.3e-10 70.1 77 45.5
BcaC05g27114 Brassica carinata HOM05D007073 ORTHO05D008855 9.0e-07 57.4 106 37.7


User provided reference genes

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