Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G235500 Phaseolus vulgaris HOM05D006726 ORTHO05D008328 1.7e-233 812.4 423 100.0
VMungo0251G2876 Vigna mungo HOM05D006726 ORTHO05D008328 1.6e-212 742.7 424 91.5
Glyma.05G155400 Glycine max HOM05D006726 ORTHO05D008328 3.4e-194 681.8 423 85.3
Glyma.08G113300 Glycine max HOM05D006726 ORTHO05D008328 8.1e-188 660.6 423 83.0
Lj4g0004177 Lotus japonicus HOM05D006726 ORTHO05D008328 1.3e-156 557.0 426 73.2
arahy.Tifrunner.gnm1.ann1.FL4TQK Arachis hypogaea HOM05D006726 ORTHO05D008328 5.3e-155 551.6 424 69.3
arahy.Tifrunner.gnm1.ann1.GT4ACT Arachis hypogaea HOM05D006726 ORTHO05D008328 4.5e-154 548.5 424 69.1
TPR.G24412 Trifolium pratense HOM05D006726 ORTHO05D008328 2.1e-151 539.7 421 68.9
Lalb_Chr07g0186641 Lupinus albus HOM05D006726 ORTHO05D008328 6.0e-151 538.1 424 70.0
Ca_17954_v3 Cicer arietinum L. HOM05D006726 ORTHO05D008328 6.9e-147 524.6 427 68.4
Medtr8g085620 Medicago truncatula HOM05D006726 ORTHO05D008328 2.7e-143 512.7 424 66.0
Psat7g073840 Pisum sativum HOM05D006726 ORTHO05D008328 1.6e-135 486.9 355 72.4
Prupe.6G006700 Prunus persica HOM05D006726 ORTHO05D008328 1.7e-113 413.7 366 60.9
MD03G1007100 Malus domestica HOM05D006726 ORTHO05D008328 5.5e-112 408.7 423 55.1
CiPaw.13G175000 Carya illinoinensis HOM05D006726 ORTHO05D008328 2.1e-111 406.8 383 58.7
QL01p008136 Quercus lobata HOM05D006726 ORTHO05D008328 2.1e-111 406.8 422 53.8
GSVIVG01025422001 Vitis vinifera HOM05D006726 ORTHO05D008328 3.6e-111 406.0 379 55.9
Dinv13438 Davidia involucrata HOM05D006726 ORTHO05D008328 4.0e-110 402.5 413 55.2
Potri.003G218100 Populus trichocarpa HOM05D006726 ORTHO05D008328 7.5e-109 398.3 372 58.6
Haze_22974 Corylus avellana HOM05D006726 ORTHO05D008328 2.0e-106 390.2 386 56.7
Sabra03G0162700 Salix brachista HOM05D006726 ORTHO05D008328 2.9e-105 386.3 372 56.7
MSTRG.18868 Avicennia marina HOM05D006726 ORTHO05D008328 7.2e-104 381.7 383 55.4
Cc01_g02530 Coffea canephora HOM05D006726 ORTHO05D008328 6.1e-103 378.6 364 55.5
Atru.chr3.2327 Acer truncatum HOM05D006726 ORTHO05D008328 4.0e-102 375.9 377 53.1
Actinidia06849 Actinidia chinensis HOM05D006726 ORTHO05D008328 4.0e-102 375.9 406 51.7
RcHm_v2.0_Chr5g0082841 Rosa chinensis HOM05D006726 ORTHO05D008328 4.0e-102 375.9 356 57.3
FAN21G0710 Fragaria x ananassa HOM05D006726 ORTHO05D008328 6.8e-102 375.2 349 57.9
Rhsim13G0230700 Rhododendron simsii HOM05D006726 ORTHO05D008328 1.2e-101 374.4 360 55.3
FvH4_3g45230 Fragaria vesca HOM05D006726 ORTHO05D008328 2.0e-101 373.6 350 57.7
FAN16G2093 Fragaria x ananassa HOM05D006726 ORTHO05D008328 2.0e-101 373.6 350 57.4
FAN25G0869 Fragaria x ananassa HOM05D006726 ORTHO05D008328 4.4e-101 372.5 349 57.3
Ciclev10015417m.g Citrus clementina HOM05D006726 ORTHO05D008328 5.7e-101 372.1 372 55.6
CANSAT11G1445 Cannabis sativa HOM05D006726 ORTHO05D008328 1.3e-100 370.9 423 50.8
COL.COLO4_35015 Corchorus olitorius HOM05D006726 ORTHO05D008328 4.8e-100 369.0 365 53.7
vmacro04222 Vaccinium macrocarpon HOM05D006726 ORTHO05D008328 1.8e-99 367.1 361 55.4
Duzib170G1137 Durio zibethinus HOM05D006726 ORTHO05D008328 2.4e-99 366.7 359 53.5
ClCG03G012030 Citrullus lanatus HOM05D006726 ORTHO05D008328 1.2e-98 364.4 374 54.0
FAN11G1313 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.2e-98 364.4 350 56.9
TAR636G2476 Trochodendron aralioides HOM05D006726 ORTHO05D008328 1.2e-98 364.4 367 54.0
Sed0027506 Sechium edule HOM05D006726 ORTHO05D008328 1.6e-98 364.0 390 53.8
CSS0004752 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 2.0e-98 363.6 359 54.3
Gorai.004G017200 Gossypium raimondii HOM05D006726 ORTHO05D008328 3.5e-98 362.8 367 52.9
Gohir.D08G021900 Gossypium hirsutum HOM05D006726 ORTHO05D008328 1.0e-97 361.3 367 52.9
TWI34G0208 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 3.3e-96 356.3 368 52.2
TWI34G0698 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 3.3e-96 356.3 368 52.2
Gohir.A08G011400 Gossypium hirsutum HOM05D006726 ORTHO05D008328 1.2e-95 354.4 370 51.4
ECA233G4338 Erigeron canadensis HOM05D006726 ORTHO05D008328 3.0e-94 349.7 390 50.8
Manes.03G084600 Manihot esculenta HOM05D006726 ORTHO05D008328 4.0e-94 349.4 373 52.5
Nitab4.5_0000775g0040 Nicotiana tabacum HOM05D006726 ORTHO05D008328 5.2e-94 349.0 402 50.2
EL10Ac4g10360 Beta vulgaris HOM05D006726 ORTHO05D008328 6.8e-94 348.6 363 50.1
PGR119G2317 Punica granatum HOM05D006726 ORTHO05D008328 1.5e-93 347.4 384 50.5
MELO3C015045.2 Cucumis melo HOM05D006726 ORTHO05D008328 2.0e-93 347.1 378 50.5
AUR62019186 Chenopodium quinoa HOM05D006726 ORTHO05D008328 9.8e-93 344.7 359 50.1
CAN.G158.14 Capsicum annuum HOM05D006726 ORTHO05D008328 4.9e-92 342.4 395 49.1
CsaV3_1G043900 Cucumis sativus L. HOM05D006726 ORTHO05D008328 6.3e-92 342.0 393 48.6
HanXRQChr13g0405181 Helianthus annuus HOM05D006726 ORTHO05D008328 1.4e-91 340.9 397 47.6
PGSC0003DMG400032136 Solanum tuberosum HOM05D006726 ORTHO05D008328 5.9e-90 335.5 393 48.9
Aqoxy1G00428 Aquilegia oxysepala HOM05D006726 ORTHO05D008328 1.0e-89 334.7 371 50.1
Sc09g0000200 Simmondsia chinensis HOM05D006726 ORTHO05D008328 3.8e-89 332.8 325 52.9
Solyc01g005930.3 Solanum lycopersicum HOM05D006726 ORTHO05D008328 8.6e-89 331.6 387 49.4
Lj2C718T3 Lonicera japonica HOM05D006726 ORTHO05D008328 2.5e-88 330.1 329 53.5
Hund07578 Selenicereus undatus HOM05D006726 ORTHO05D008328 5.6e-88 328.9 364 49.2
Lsat_1_v5_gn_6_52180 Lactuca sativa HOM05D006726 ORTHO05D008328 7.3e-88 328.6 412 48.5
Migut.D02543 Erythranthe guttata HOM05D006726 ORTHO05D008328 1.2e-87 327.8 364 50.8
THA.LOC104810333 Tarenaya hassleriana HOM05D006726 ORTHO05D008328 5.2e-86 322.4 391 48.1
Nitab4.5_0001059g0100 Nicotiana tabacum HOM05D006726 ORTHO05D008328 1.2e-85 321.2 411 46.7
Sopen01g001940 Solanum pennellii HOM05D006726 ORTHO05D008328 4.4e-85 319.3 387 48.1
AT1G55280 Arabidopsis thaliana HOM05D006726 ORTHO05D008328 1.7e-84 317.4 367 50.7
Eucgr.J01803 Eucalyptus grandis HOM05D006726 ORTHO05D008328 1.7e-84 317.4 324 52.8
Sp1g40950 Schrenkiella parvula HOM05D006726 ORTHO05D008328 6.4e-84 315.5 390 48.2
Thecc.09G210400 Theobroma cacao HOM05D006726 ORTHO05D008328 2.4e-83 313.5 360 48.3
Thhalv10011547m.g Eutrema salsugineum HOM05D006726 ORTHO05D008328 3.5e-82 309.7 365 49.0
Cpa.g.sc119.74 Carica papaya HOM05D006726 ORTHO05D008328 1.3e-81 307.8 322 51.9
Peaxi162Scf00100g00318 Petunia axillaris HOM05D006726 ORTHO05D008328 1.7e-81 307.4 401 46.6
AL1G63330 Arabidopsis lyrata HOM05D006726 ORTHO05D008328 3.0e-81 306.6 393 47.6
BcaC01g01509 Brassica carinata HOM05D006726 ORTHO05D008328 5.0e-81 305.8 364 49.2
A08p00750 Brassica napus HOM05D006726 ORTHO05D008328 5.0e-81 305.8 362 48.6
BraA08t32132Z Brassica rapa HOM05D006726 ORTHO05D008328 5.0e-81 305.8 362 48.6
CARHR044940 Cardamine hirsuta HOM05D006726 ORTHO05D008328 6.6e-81 305.4 361 50.4
PSO339G4123 Papaver somniferum HOM05D006726 ORTHO05D008328 1.5e-80 304.3 385 45.5
C03p92580 Brassica napus HOM05D006726 ORTHO05D008328 5.6e-80 302.4 365 47.4
BolC3t21572H Brassica oleracea HOM05D006726 ORTHO05D008328 2.8e-79 300.1 365 47.1
DCAR_026158 Daucus carota HOM05D006726 ORTHO05D008328 1.4e-78 297.7 359 45.1
SalBow6G1149 Salvia bowleyana HOM05D006726 ORTHO05D008328 2.3e-78 297.0 373 47.5
SGA_v2.0_scaffold6G03420 Striga asiatica HOM05D006726 ORTHO05D008328 5.8e-77 292.4 362 45.9
ATR0001G014 Amborella trichopoda HOM05D006726 ORTHO05D008328 9.8e-77 291.6 369 46.6
Nn2g15797 Nelumbo nucifera HOM05D006726 ORTHO05D008328 1.2e-74 284.6 300 53.7
PSO384G1418 Papaver somniferum HOM05D006726 ORTHO05D008328 1.1e-72 278.1 423 40.9
AUR62000016 Chenopodium quinoa HOM05D001875 ORTHO05D008328 4.0e-70 269.6 281 51.2
Actinidia16259 Actinidia chinensis HOM05D006726 ORTHO05D008328 8.3e-68 261.9 309 49.8
BcaB04g16967 Brassica carinata HOM05D006726 ORTHO05D008328 1.3e-65 254.6 305 47.9
Carub.0001s4379 Capsella rubella HOM05D006726 ORTHO05D008328 2.3e-65 253.8 302 47.7
MBI01_g14456_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 4.7e-63 246.1 355 43.4
HPP92_006110 Vanilla planifolia HOM05D006726 ORTHO05D008328 3.8e-60 236.5 378 40.2
Os11g0491400 Oryza sativa ssp. japonica HOM05D006726 ORTHO05D008328 2.4e-59 233.8 363 39.1
Zm00001eb169450 Zea mays HOM05D006726 ORTHO05D008328 2.1e-58 230.7 368 40.2
CSS0003958 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 3.3e-56 223.4 236 51.7
CSS0031538 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 3.3e-56 223.4 236 51.7
Hma1.2p1_0843F.1_g227250 Hydrangea macrophylla HOM05D006726 ORTHO05D008328 1.6e-55 221.1 247 53.0
CDE06G2716 Ceratophyllum demersum HOM05D006726 ORTHO05D008328 9.0e-54 215.3 382 40.1
Aa31LG10G1050 Aethionema arabicum HOM05D006726 ORTHO05D008328 2.2e-44 184.1 236 45.8
Pp3c13_13690 Physcomitrium patens HOM05D006726 ORTHO05D008328 3.5e-42 176.8 404 31.7
MBI01_g46956_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 5.6e-40 169.5 216 45.4
CSS0014249 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 4.6e-34 149.8 125 60.0
CSS0044208 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 4.6e-34 149.8 125 60.0
Mapoly0036s0044 Marchantia polymorpha HOM05D006726 ORTHO05D008328 2.5e-32 144.1 391 28.9
CSS0027573 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 4.3e-32 143.3 237 38.0
unitig_749.g13586 Utricularia gibba HOM05D006726 ORTHO05D008328 2.8e-31 140.6 184 48.4
C03p92600 Brassica napus HOM05D006726 ORTHO05D008328 4.5e-29 133.3 143 49.7
CSS0045731 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 2.5e-27 127.5 116 56.0
BcaC01g01511 Brassica carinata HOM05D006726 ORTHO05D008328 3.2e-27 127.1 153 49.0
CDE08G1235 Ceratophyllum demersum HOM05D004967 ORTHO05D006146 1.0e-25 122.1 206 42.2
AagrBONN_evm.TU.Sc2ySwM_368.685 Anthoceros agrestis HOM05D006726 ORTHO05D008328 1.1e-24 118.6 339 32.4
SMO268G0018 Selaginella moellendorffii HOM05D006726 ORTHO05D008328 1.5e-21 108.2 352 29.0
unitig_749.g13585 Utricularia gibba HOM05D006726 ORTHO05D008328 2.9e-20 104.0 131 42.0
MBI01_g46957_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 6.5e-20 102.8 123 45.5
Lalb_Chr13g0294981 Lupinus albus HOM05D006726 ORTHO05D008328 1.4e-11 75.1 60 68.3


User provided reference genes

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