Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G230700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 3.2e-153 545.0 272 100.0
VMungo0251G1522 Vigna mungo HOM05D007298 ORTHO05D009226 1.5e-139 499.6 272 92.6
Glyma.07G199400 Glycine max HOM05D007298 ORTHO05D009226 1.4e-103 380.2 282 77.0
Glyma.13G177000 Glycine max HOM05D007298 ORTHO05D009226 2.7e-96 355.9 287 73.2
Lj4g0005920 Lotus japonicus HOM05D007298 ORTHO05D009226 2.0e-94 349.7 284 70.8
Psat7g113280 Pisum sativum HOM05D007298 ORTHO05D009226 6.3e-93 344.7 287 67.9
Lalb_Chr16g0383911 Lupinus albus HOM05D007298 ORTHO05D009226 1.4e-92 343.6 292 69.5
TPR.G16338 Trifolium pratense HOM05D007298 ORTHO05D009226 1.0e-90 337.4 291 67.4
Lalb_Chr05g0218531 Lupinus albus HOM05D007298 ORTHO05D009226 7.2e-89 331.3 283 69.6
Lalb_Chr09g0327771 Lupinus albus HOM05D007298 ORTHO05D009226 1.0e-87 327.4 288 66.3
Medtr4g088515 Medicago truncatula HOM05D000062 ORTHO05D000043 3.7e-85 318.9 275 68.0
Ca_18576_v3 Cicer arietinum L. HOM05D007298 ORTHO05D009226 1.5e-81 307.0 279 62.4
arahy.Tifrunner.gnm1.ann1.IS7ZQD Arachis hypogaea HOM05D002349 ORTHO05D002464 1.2e-75 287.3 286 62.6
arahy.Tifrunner.gnm1.ann1.MB6W4F Arachis hypogaea HOM05D002349 ORTHO05D002464 1.2e-75 287.3 286 62.6
CiPaw.13G179900 Carya illinoinensis HOM05D007298 ORTHO05D009226 1.0e-71 274.2 290 58.6
COL.COLO4_37432 Corchorus olitorius HOM05D007298 ORTHO05D009226 4.9e-69 265.4 301 53.2
Thecc.03G118900 Theobroma cacao HOM05D007298 ORTHO05D009226 9.2e-68 261.2 294 55.4
Cfa009528 Carpinus fangiana HOM05D007298 ORTHO05D009226 2.3e-66 256.5 292 55.5
Duzib205G1649 Durio zibethinus HOM05D007298 ORTHO05D009226 9.5e-65 251.1 283 54.1
Gohir.A12G186800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 1.6e-64 250.4 285 53.7
Gohir.D12G189800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 3.6e-64 249.2 285 53.0
Gorai.008G203600 Gossypium raimondii HOM05D007298 ORTHO05D009226 2.3e-63 246.5 285 52.3
vmacro16084 Vaccinium macrocarpon HOM05D007298 ORTHO05D009226 4.0e-63 245.7 288 52.4
MELO3C026268.2 Cucumis melo HOM05D007298 ORTHO05D009226 4.9e-61 238.8 282 51.4
Potri.001G001000 Populus trichocarpa HOM05D007298 ORTHO05D009226 1.4e-60 237.3 279 53.4
Sabra01G0000900 Salix brachista HOM05D007298 ORTHO05D009226 3.2e-60 236.1 292 51.7
CsaV3_1G001220 Cucumis sativus L. HOM05D007298 ORTHO05D009226 7.0e-60 235.0 282 50.7
QL01p007822 Quercus lobata HOM05D007298 ORTHO05D009226 1.2e-59 234.2 279 52.7
Sed0017427 Sechium edule HOM05D007298 ORTHO05D009226 2.0e-59 233.4 283 50.5
MBI13_g02430_MAGBIO Magnolia biondii HOM05D007298 ORTHO05D009226 5.9e-59 231.9 285 52.3
ClCG06G017280 Citrullus lanatus HOM05D007298 ORTHO05D009226 2.3e-58 229.9 270 51.9
Hma1.2p1_1436F.1_g283160 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 2.3e-58 229.9 294 52.0
Haze_22918 Corylus avellana HOM05D007298 ORTHO05D009226 7.3e-57 224.9 295 51.2
TAR623G1587 Trochodendron aralioides HOM05D007298 ORTHO05D009226 9.5e-57 224.6 274 50.7
CSS0015764 Camellia sinensis var. sinensis HOM05D007298 ORTHO05D009226 1.6e-56 223.8 280 49.6
PGR119G1464 Punica granatum HOM05D007298 ORTHO05D009226 2.1e-56 223.4 273 51.6
TWI32G0891 Tripterygium wilfordii HOM05D007298 ORTHO05D009226 2.1e-56 223.4 272 51.5
Actinidia30606 Actinidia chinensis HOM05D007298 ORTHO05D009226 2.8e-56 223.0 280 47.9
Nn7g35796 Nelumbo nucifera HOM05D007298 ORTHO05D009226 4.7e-56 222.2 285 51.6
Peaxi162Scf00128g01770 Petunia axillaris HOM05D007298 ORTHO05D009226 4.7e-56 222.2 266 48.5
Aqoxy2G04036 Aquilegia oxysepala HOM05D007298 ORTHO05D009226 6.8e-55 218.4 273 50.2
Nn2g15906 Nelumbo nucifera HOM05D007298 ORTHO05D009226 3.4e-54 216.1 296 48.6
Rhsim12G0097800 Rhododendron simsii HOM05D007298 ORTHO05D009226 3.7e-53 212.6 275 48.4
Nitab4.5_0008442g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 1.4e-52 210.7 280 45.7
Nitab4.5_0007554g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 3.2e-52 209.5 266 48.1
Cc11_g17470 Coffea canephora HOM05D007298 ORTHO05D009226 1.6e-51 207.2 284 47.5
Ciclev10017525m.g Citrus clementina HOM05D007298 ORTHO05D009226 8.6e-50 201.4 241 53.5
PGSC0003DMG400025413 Solanum tuberosum HOM05D007298 ORTHO05D009226 8.6e-50 201.4 262 48.1
Nitab4.5_0001600g0070 Nicotiana tabacum HOM05D005538 ORTHO05D007055 7.3e-49 198.4 264 45.8
Sopen05g018720 Solanum pennellii HOM05D007298 ORTHO05D009226 2.0e-46 190.3 256 46.9
Eucgr.J01725 Eucalyptus grandis HOM05D007298 ORTHO05D009226 4.9e-45 185.7 282 46.5
MD11G1000700 Malus domestica HOM05D007298 ORTHO05D009226 1.4e-44 184.1 272 47.4
Migut.K01030 Erythranthe guttata HOM05D007298 ORTHO05D009226 3.2e-44 183.0 265 44.2
Manes.15G111000 Manihot esculenta HOM05D007298 ORTHO05D009226 4.1e-44 182.6 221 53.4
Sc05g0003880 Simmondsia chinensis HOM05D007298 ORTHO05D009226 5.4e-44 182.2 298 43.0
Solyc05g024020.1 Solanum lycopersicum HOM05D007298 ORTHO05D009226 7.1e-44 181.8 252 46.8
Dinv31519 Davidia involucrata HOM05D007298 ORTHO05D009226 2.3e-42 176.8 218 52.8
RcHm_v2.0_Chr5g0084091 Rosa chinensis HOM05D007298 ORTHO05D009226 8.6e-42 174.9 350 40.6
EL10Ac4g07728 Beta vulgaris HOM05D007298 ORTHO05D009226 5.6e-41 172.2 257 44.4
Actinidia09612 Actinidia chinensis HOM05D007298 ORTHO05D009226 9.5e-41 171.4 263 42.2
AUR62008624 Chenopodium quinoa HOM05D007298 ORTHO05D009226 1.2e-40 171.0 232 48.7
Duzib084G1143 Durio zibethinus HOM05D007298 ORTHO05D009226 2.1e-40 170.2 185 55.7
FvH4_3g45980 Fragaria vesca HOM05D007298 ORTHO05D009226 2.0e-38 163.7 314 41.4
FAN16G2589 Fragaria x ananassa HOM05D007298 ORTHO05D009226 2.0e-38 163.7 316 42.1
AUR62033147 Chenopodium quinoa HOM05D007298 ORTHO05D009226 4.4e-38 162.5 223 47.5
Sed0020092 Sechium edule HOM05D007298 ORTHO05D009226 4.4e-38 162.5 199 52.8
C07p54880 Brassica napus HOM05D007298 ORTHO05D009226 5.8e-38 162.2 294 41.2
BolC7t45976H Brassica oleracea HOM05D007298 ORTHO05D009226 5.8e-38 162.2 294 41.2
A03p56680 Brassica napus HOM05D007298 ORTHO05D009226 9.9e-38 161.4 293 41.3
BraA03t14738Z Brassica rapa HOM05D007298 ORTHO05D009226 9.9e-38 161.4 293 41.3
Cpa.g.sc119.13 Carica papaya HOM05D007298 ORTHO05D009226 9.9e-38 161.4 279 40.9
Carub.0007s1454 Capsella rubella HOM05D007298 ORTHO05D009226 1.7e-37 160.6 300 40.3
Hma1.2p1_0459F.1_g157260 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 1.7e-37 160.6 223 48.0
Ah.08g213460 Amaranthus hybridus HOM05D007298 ORTHO05D009226 2.9e-37 159.8 286 40.2
Glyma.15G076400 Glycine max HOM05D007298 ORTHO05D009226 4.9e-37 159.1 209 53.1
Lsat_1_v5_gn_4_2201 Lactuca sativa HOM05D007298 ORTHO05D009226 1.1e-36 157.9 274 42.0
THA.LOC104813474 Tarenaya hassleriana HOM05D007298 ORTHO05D009226 1.1e-36 157.9 269 43.1
AT4G26415 Arabidopsis thaliana HOM05D007298 ORTHO05D009226 1.4e-36 157.5 305 40.0
Thhalv10026008m.g Eutrema salsugineum HOM05D007298 ORTHO05D009226 1.4e-36 157.5 284 40.5
BcaC06g32750 Brassica carinata HOM05D007298 ORTHO05D009226 2.4e-36 156.8 280 41.1
CARHR233970 Cardamine hirsuta HOM05D007298 ORTHO05D009226 1.2e-35 154.5 290 41.0
Sp7g24320 Schrenkiella parvula HOM05D007298 ORTHO05D009226 1.2e-35 154.5 298 39.9
AL7G26540 Arabidopsis lyrata HOM05D007298 ORTHO05D009226 2.7e-35 153.3 288 40.6
SGA_v2.0_scaffold9G04794 Striga asiatica HOM05D002076 ORTHO05D002087 3.5e-35 152.9 269 41.3
Prupe.6G001000 Prunus persica HOM05D007298 ORTHO05D009226 1.7e-34 150.6 319 39.2
BcaNung02423 Brassica carinata HOM05D007298 ORTHO05D009226 1.1e-33 147.9 295 40.3
DCAR_006996 Daucus carota HOM05D007298 ORTHO05D009226 1.1e-33 147.9 254 41.7
FAN11G2203 Fragaria x ananassa HOM05D007298 ORTHO05D009226 1.1e-33 147.9 304 40.1
FAN21G1139 Fragaria x ananassa HOM05D007298 ORTHO05D009226 1.5e-33 147.5 305 40.7
HanXRQChr12g0385721 Helianthus annuus HOM05D007298 ORTHO05D009226 1.9e-33 147.1 189 48.1
FAN25G2175 Fragaria x ananassa HOM05D007298 ORTHO05D009226 4.3e-33 146.0 333 39.9
unitig_22.g6385 Utricularia gibba HOM05D007298 ORTHO05D009226 2.6e-30 136.7 209 45.0
DCAR_006994 Daucus carota HOM05D007298 ORTHO05D009226 3.4e-30 136.3 243 41.2
CANSAT11G1103 Cannabis sativa HOM05D007298 ORTHO05D009226 8.4e-29 131.7 240 42.1
SalBow2G0405 Salvia bowleyana HOM05D007298 ORTHO05D009226 1.1e-28 131.3 247 37.2
SalBow2G1404 Salvia bowleyana HOM05D007298 ORTHO05D009226 1.1e-28 131.3 247 37.2
ATR0068G085 Amborella trichopoda HOM05D007298 ORTHO05D009226 2.4e-28 130.2 340 32.4
Glyma.13G237100 Glycine max HOM05D007298 ORTHO05D009226 2.1e-27 127.1 127 61.4
Phvul.006G183700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 7.8e-27 125.2 200 45.0
Zm00001eb127960 Zea mays HOM05D007298 ORTHO05D009226 2.5e-25 120.2 226 39.4
CDE07G0295 Ceratophyllum demersum HOM05D000114 ORTHO05D000038 4.8e-16 89.4 116 48.3
Nitab4.5_0000340g0060 Nicotiana tabacum HOM05D007298 ORTHO05D009226 3.5e-11 73.2 88 47.7
BcaC09g50696 Brassica carinata HOM05D007298 ORTHO05D009226 1.5e-06 57.8 62 51.6
C01p22230 Brassica napus HOM05D007298 ORTHO05D009226 1.5e-06 57.8 62 51.6
BolC1t02153H Brassica oleracea HOM05D007298 ORTHO05D009226 1.5e-06 57.8 62 51.6
SEGI_13333 Sequoiadendron giganteum HOM05D007298 ORTHO05D009226 4.5e-06 56.2 180 32.2


User provided reference genes

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