Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G229600 Phaseolus vulgaris HOM05D007285 ORTHO05D009224 1.8e-54 215.7 114 100.0
VMungo0251G0987 Vigna mungo HOM05D007285 ORTHO05D009224 2.8e-50 201.8 112 94.6
Glyma.07G198400 Glycine max HOM05D007285 ORTHO05D009224 2.0e-40 169.1 114 80.7
Glyma.13G178000 Glycine max HOM05D007285 ORTHO05D009224 3.2e-38 161.8 114 78.1
TPR.G16329 Trifolium pratense HOM05D007285 ORTHO05D009224 3.2e-38 161.8 112 80.4
Lj4g0016922 Lotus japonicus HOM05D007285 ORTHO05D009224 1.6e-37 159.5 110 79.1
Ca_18554_v3 Cicer arietinum L. HOM05D007285 ORTHO05D009224 2.3e-36 155.6 114 76.3
Medtr4g088680 Medicago truncatula HOM05D007285 ORTHO05D009224 6.6e-36 154.1 113 76.1
arahy.Tifrunner.gnm1.ann1.J7N80D Arachis hypogaea HOM05D007285 ORTHO05D009224 1.2e-34 149.8 102 78.4
arahy.Tifrunner.gnm1.ann1.VSLT1W Arachis hypogaea HOM05D007285 ORTHO05D009224 1.2e-34 149.8 102 78.4
Psat7g114520 Pisum sativum HOM05D007285 ORTHO05D009224 3.6e-34 148.3 101 80.2
PGR042G2867 Punica granatum HOM05D007285 ORTHO05D009224 8.1e-34 147.1 103 77.7
Lalb_Chr15g0089751 Lupinus albus HOM05D007285 ORTHO05D009224 3.1e-33 145.2 110 74.5
MD10G1292600 Malus domestica HOM05D007285 ORTHO05D009224 4.0e-33 144.8 99 76.8
RcHm_v2.0_Chr5g0008721 Rosa chinensis HOM05D007285 ORTHO05D009224 2.0e-32 142.5 101 74.3
MD00G1116000 Malus domestica HOM05D007285 ORTHO05D009224 3.4e-32 141.7 99 74.7
COL.COLO4_31450 Corchorus olitorius HOM05D007285 ORTHO05D009224 4.4e-32 141.4 100 76.0
FAN21G1653 Fragaria x ananassa HOM05D007285 ORTHO05D009224 1.3e-31 139.8 112 66.1
Prupe.4G049200 Prunus persica HOM05D007285 ORTHO05D009224 1.3e-31 139.8 105 70.5
FAN16G1611 Fragaria x ananassa HOM05D007285 ORTHO05D009224 1.7e-31 139.4 113 66.4
FAN25G3510 Fragaria x ananassa HOM05D007285 ORTHO05D009224 2.2e-31 139.0 102 72.5
FvH4_3g08990 Fragaria vesca HOM05D007285 ORTHO05D009224 2.9e-31 138.7 113 66.4
Actinidia07587 Actinidia chinensis HOM05D007285 ORTHO05D009224 3.8e-31 138.3 105 75.2
Ciclev10017252m.g Citrus clementina HOM05D007285 ORTHO05D009224 3.8e-31 138.3 103 72.8
Atru.chr10.1858 Acer truncatum HOM05D007285 ORTHO05D009224 4.9e-31 137.9 108 70.4
CsaV3_1G012400 Cucumis sativus L. HOM05D007285 ORTHO05D009224 6.4e-31 137.5 111 68.5
Potri.004G045400 Populus trichocarpa HOM05D007285 ORTHO05D009224 1.1e-30 136.7 100 74.0
SalBow8G5072 Salvia bowleyana HOM05D007285 ORTHO05D009224 5.4e-30 134.4 99 75.8
Sed0014393 Sechium edule HOM05D007285 ORTHO05D009224 1.2e-29 133.3 108 65.7
Thecc.06G185100 Theobroma cacao HOM05D007285 ORTHO05D009224 1.2e-29 133.3 95 76.8
ClCG03G008150 Citrullus lanatus HOM05D007285 ORTHO05D009224 2.7e-29 132.1 108 65.7
Manes.17G046800 Manihot esculenta HOM05D007285 ORTHO05D009224 2.7e-29 132.1 95 77.9
Gohir.D06G133300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 3.5e-29 131.7 103 69.9
CiPaw.09G061300 Carya illinoinensis HOM05D007285 ORTHO05D009224 4.6e-29 131.3 99 72.7
Gorai.010G155100 Gossypium raimondii HOM05D007285 ORTHO05D009224 1.0e-28 130.2 103 68.9
Rhsim02G0132100 Rhododendron simsii HOM05D007285 ORTHO05D009224 1.0e-28 130.2 102 71.6
Sed0001788 Sechium edule HOM05D007285 ORTHO05D009224 1.0e-28 130.2 106 67.0
Actinidia26129 Actinidia chinensis HOM05D007285 ORTHO05D009224 2.3e-28 129.0 102 70.6
TWI38G2229 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 2.3e-28 129.0 103 66.0
Hma1.2p1_0208F.1_g088230 Hydrangea macrophylla HOM05D007285 ORTHO05D009224 3.9e-28 128.3 97 74.2
Dinv40575 Davidia involucrata HOM05D007285 ORTHO05D009224 1.1e-27 126.7 100 74.0
SGA_v2.0_scaffold100G29692 Striga asiatica HOM05D007285 ORTHO05D009224 1.1e-27 126.7 102 70.6
TWI63G1057 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 1.1e-27 126.7 95 71.6
Nitab4.5_0005745g0020 Nicotiana tabacum HOM05D007285 ORTHO05D009224 1.5e-27 126.3 108 67.6
Gohir.A06G129300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 2.5e-27 125.6 103 67.0
Migut.M01131 Erythranthe guttata HOM05D007285 ORTHO05D009224 3.3e-27 125.2 92 76.1
Peaxi162Scf00623g00519 Petunia axillaris HOM05D007285 ORTHO05D009224 7.3e-27 124.0 103 68.9
CSS0032734 Camellia sinensis var. sinensis HOM05D007285 ORTHO05D009224 9.6e-27 123.6 104 72.1
Sopen02g022850 Solanum pennellii HOM05D007285 ORTHO05D009224 9.6e-27 123.6 105 68.6
MSTRG.7339 Avicennia marina HOM05D007285 ORTHO05D009224 1.2e-26 123.2 101 69.3
Solyc02g078010.4 Solanum lycopersicum HOM05D007285 ORTHO05D009224 1.2e-26 123.2 105 68.6
Aa31LG6G10160 Aethionema arabicum HOM05D007285 ORTHO05D009224 2.8e-26 122.1 101 63.4
Eucgr.E03264 Eucalyptus grandis HOM05D007285 ORTHO05D009224 2.8e-26 122.1 107 63.6
CAN.G529.14 Capsicum annuum HOM05D007285 ORTHO05D009224 3.6e-26 121.7 103 68.9
Hund23773 Selenicereus undatus HOM05D007285 ORTHO05D009224 4.7e-26 121.3 93 75.3
unitig_27.g24965 Utricularia gibba HOM05D007285 ORTHO05D009224 6.2e-26 120.9 111 64.0
Cc02_g13540 Coffea canephora HOM05D007285 ORTHO05D009224 8.1e-26 120.6 102 68.6
THA.LOC104820545 Tarenaya hassleriana HOM05D007285 ORTHO05D009224 8.1e-26 120.6 96 67.7
EL10Ac8g20395 Beta vulgaris HOM05D007285 ORTHO05D009224 1.4e-25 119.8 114 61.4
Dinv17325 Davidia involucrata HOM05D007285 ORTHO05D009224 5.2e-25 117.9 97 74.2
AUR62017028 Chenopodium quinoa HOM05D007285 ORTHO05D009224 6.9e-25 117.5 114 61.4
Lsat_1_v5_gn_4_52261 Lactuca sativa HOM05D007285 ORTHO05D009224 8.9e-25 117.1 90 72.2
Nn1g04136 Nelumbo nucifera HOM05D007285 ORTHO05D009224 2.0e-24 115.9 100 67.0
CANSAT35G0751 Cannabis sativa HOM05D007285 ORTHO05D009224 3.4e-24 115.2 102 65.7
CARHR027740 Cardamine hirsuta HOM05D007285 ORTHO05D009224 3.4e-24 115.2 94 62.8
HanXRQChr14g0435131 Helianthus annuus HOM05D007285 ORTHO05D009224 7.6e-24 114.0 102 67.6
Ah.09g237440 Amaranthus hybridus HOM05D007285 ORTHO05D009224 2.9e-23 112.1 103 60.2
BolC3t19748H Brassica oleracea HOM05D007285 ORTHO05D009224 2.9e-23 112.1 97 60.8
DCAR_008032 Daucus carota HOM05D007285 ORTHO05D009224 3.8e-23 111.7 93 69.9
A09p37820 Brassica napus HOM05D007285 ORTHO05D009224 4.9e-23 111.3 90 62.2
BraA09t39294Z Brassica rapa HOM05D007285 ORTHO05D009224 4.9e-23 111.3 90 62.2
PSO541G0778 Papaver somniferum HOM05D007285 ORTHO05D009224 4.9e-23 111.3 100 65.0
AL1G41800 Arabidopsis lyrata HOM05D007285 ORTHO05D009224 6.4e-23 110.9 96 59.4
Carub.0001s2669 Capsella rubella HOM05D007285 ORTHO05D009224 6.4e-23 110.9 102 56.9
BcaC05g26830 Brassica carinata HOM05D007285 ORTHO05D009224 1.1e-22 110.2 90 61.1
C05p27060 Brassica napus HOM05D007285 ORTHO05D009224 1.1e-22 110.2 90 61.1
AT1G28250 Arabidopsis thaliana HOM05D007285 ORTHO05D009224 1.4e-22 109.8 96 59.4
Sc05g0007570 Simmondsia chinensis HOM05D007285 ORTHO05D009224 3.2e-22 108.6 105 63.8
BcaB07g32433 Brassica carinata HOM05D007285 ORTHO05D009224 5.4e-22 107.8 97 56.7
Thhalv10009792m.g Eutrema salsugineum HOM05D007285 ORTHO05D009224 1.2e-21 106.7 111 55.0
TAR626G1757 Trochodendron aralioides HOM05D007285 ORTHO05D009224 1.6e-21 106.3 100 63.0
Haze_06424 Corylus avellana HOM05D007285 ORTHO05D009224 1.3e-20 103.2 72 77.8
Sabra04G0028300 Salix brachista HOM05D007285 ORTHO05D009224 2.3e-20 102.4 152 46.7
HPP92_007016 Vanilla planifolia HOM05D007285 ORTHO05D009224 5.1e-20 101.3 108 54.6
ATR0763G085 Amborella trichopoda HOM05D007285 ORTHO05D009224 8.7e-20 100.5 109 52.3
QL05p041285 Quercus lobata HOM05D007285 ORTHO05D009224 8.7e-20 100.5 70 77.1
BolC5t31425H Brassica oleracea HOM05D007285 ORTHO05D009224 2.5e-19 99.0 108 50.9
BcaC01g00030 Brassica carinata HOM05D007285 ORTHO05D009224 5.6e-19 97.8 123 48.0
MELO3C002614.2 Cucumis melo HOM05D007285 ORTHO05D009224 5.6e-19 97.8 68 77.9
CDE01G0551 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 1.6e-18 96.3 102 51.0
Zm00001eb305570 Zea mays HOM05D007285 ORTHO05D009224 2.8e-18 95.5 102 52.9
SEGI_38595 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 6.2e-18 94.4 92 56.5
PGSC0003DMG401029703 Solanum tuberosum HOM05D007285 ORTHO05D009224 1.4e-17 93.2 91 63.7
ECA234G4273 Erigeron canadensis HOM05D007285 ORTHO05D009224 2.4e-17 92.4 70 75.7
SalBow8G3155 Salvia bowleyana HOM05D007285 ORTHO05D009224 6.9e-17 90.9 66 77.3
vmacro15913 Vaccinium macrocarpon HOM05D007285 ORTHO05D009224 6.9e-17 90.9 77 68.8
BcaB03g12118 Brassica carinata HOM05D007285 ORTHO05D009224 3.4e-16 88.6 73 61.6
DCAR_004065 Daucus carota HOM05D007285 ORTHO05D009224 4.9e-15 84.7 84 63.1
Pp3c8_510 Physcomitrium patens HOM05D007285 ORTHO05D009224 7.9e-13 77.4 96 47.9
Os07g0299600 Oryza sativa ssp. japonica HOM05D007285 ORTHO05D009224 3.0e-12 75.5 111 45.0
C03p74970 Brassica napus HOM05D007285 ORTHO05D009224 2.5e-11 72.4 101 43.6
Mapoly0007s0165 Marchantia polymorpha HOM05D007285 ORTHO05D009224 3.3e-11 72.0 87 46.0
CDE12G0235 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 1.2e-08 63.5 99 43.4
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 1.4e-06 56.6 65 49.2
SEGI_39568 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 3.2e-06 55.5 48 60.4


User provided reference genes

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