Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G227700 Phaseolus vulgaris HOM05D006332 ORTHO05D008421 4.5e-250 867.5 441 100.0
VMungo0251G1219 Vigna mungo HOM05D006332 ORTHO05D008421 3.6e-239 831.2 435 96.6
Glyma.13G181100 Glycine max HOM05D006332 ORTHO05D008421 3.7e-228 794.7 430 92.6
Ca_18532_v3 Cicer arietinum L. HOM05D006332 ORTHO05D008421 6.8e-222 773.9 441 87.8
Lj4g0020818 Lotus japonicus HOM05D006332 ORTHO05D008421 6.8e-222 773.9 429 89.5
Glyma.07G195200 Glycine max HOM05D006332 ORTHO05D008421 2.2e-220 768.8 441 88.9
Medtr4g088960 Medicago truncatula HOM05D006332 ORTHO05D008421 1.2e-218 763.1 441 86.8
TPR.G12057 Trifolium pratense HOM05D006332 ORTHO05D008421 7.8e-218 760.4 441 86.8
Lalb_Chr16g0383661 Lupinus albus HOM05D006332 ORTHO05D008421 9.5e-216 753.4 431 87.2
Psat7g112800 Pisum sativum HOM05D006332 ORTHO05D008421 1.6e-215 752.7 429 88.1
arahy.Tifrunner.gnm1.ann1.5TP18E Arachis hypogaea HOM05D006332 ORTHO05D008421 2.7e-210 735.3 426 86.4
arahy.Tifrunner.gnm1.ann1.I941VF Arachis hypogaea HOM05D006332 ORTHO05D008421 2.7e-210 735.3 425 86.8
CiPaw.09G057500 Carya illinoinensis HOM05D006332 ORTHO05D008421 1.4e-195 686.4 434 79.3
Thecc.06G190700 Theobroma cacao HOM05D006332 ORTHO05D008421 2.1e-194 682.6 434 78.3
Gohir.D06G130900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.1e-192 676.8 434 77.4
QL05p039635 Quercus lobata HOM05D006332 ORTHO05D008421 7.3e-192 674.1 451 76.3
Dinv07538 Davidia involucrata HOM05D006332 ORTHO05D008421 1.3e-191 673.3 436 78.9
Prupe.4G044000 Prunus persica HOM05D006332 ORTHO05D008421 1.6e-191 672.9 447 76.7
COL.COLO4_31500 Corchorus olitorius HOM05D006332 ORTHO05D008421 4.8e-191 671.4 456 75.7
Duzib235G1125 Durio zibethinus HOM05D006332 ORTHO05D008421 5.3e-190 667.9 431 77.3
Gohir.A06G126100 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.2e-189 666.8 436 76.4
Actinidia01892 Actinidia chinensis HOM05D006332 ORTHO05D008421 1.5e-189 666.4 435 76.8
Duzib160G0593 Durio zibethinus HOM05D006332 ORTHO05D008421 4.5e-189 664.8 428 77.6
RcHm_v2.0_Chr5g0008031 Rosa chinensis HOM05D006332 ORTHO05D008421 7.6e-189 664.1 433 76.7
MD10G1296600 Malus domestica HOM05D006332 ORTHO05D008421 4.9e-188 661.4 440 76.8
Cpa.g.sc27.66 Carica papaya HOM05D006332 ORTHO05D008421 6.4e-188 661.0 427 76.6
GSVIVG01002030001 Vitis vinifera HOM05D006332 ORTHO05D008421 1.9e-187 659.4 443 75.8
FAN16G1437 Fragaria x ananassa HOM05D006332 ORTHO05D008421 9.3e-187 657.1 434 76.0
Lj1C1207T6 Lonicera japonica HOM05D006332 ORTHO05D008421 3.5e-186 655.2 426 76.1
FvH4_3g04870 Fragaria vesca HOM05D006332 ORTHO05D008421 6.0e-186 654.4 437 75.1
FAN21G2488 Fragaria x ananassa HOM05D003523 ORTHO05D004493 3.9e-185 651.7 428 76.2
TWI38G1702 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 5.1e-185 651.4 438 76.5
TAR629G2846 Trochodendron aralioides HOM05D006332 ORTHO05D008421 6.7e-185 651.0 433 76.0
CsaV3_1G012160 Cucumis sativus L. HOM05D006332 ORTHO05D008421 1.1e-184 650.2 437 73.7
Haze_06500 Corylus avellana HOM05D006332 ORTHO05D008421 1.5e-184 649.8 439 75.6
Gorai.010G152800 Gossypium raimondii HOM05D006332 ORTHO05D008421 1.9e-184 649.4 421 77.2
MELO3C002589.2 Cucumis melo HOM05D006332 ORTHO05D008421 2.5e-184 649.0 435 73.6
Sed0003237 Sechium edule HOM05D006332 ORTHO05D008421 3.3e-184 648.7 434 73.0
FAN11G2101 Fragaria x ananassa HOM05D003523 ORTHO05D004493 4.3e-184 648.3 437 74.4
MD05G1316100 Malus domestica HOM05D006332 ORTHO05D008421 5.6e-184 647.9 453 73.7
Cc02_g13080 Coffea canephora HOM05D006332 ORTHO05D008421 9.6e-184 647.1 431 75.9
PGR004G2698 Punica granatum HOM05D006332 ORTHO05D008421 3.7e-183 645.2 435 74.3
Manes.16G025600 Manihot esculenta HOM05D006332 ORTHO05D008421 6.2e-183 644.4 436 75.5
Potri.004G040500 Populus trichocarpa HOM05D006332 ORTHO05D008421 1.4e-182 643.3 432 75.0
ClCG03G005920 Citrullus lanatus HOM05D006332 ORTHO05D008421 2.4e-182 642.5 429 74.6
Hma1.2p1_0881F.1_g231970 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 4.0e-182 641.7 430 75.8
CANSAT35G2021 Cannabis sativa HOM05D006332 ORTHO05D008421 5.3e-182 641.3 435 75.6
Gohir.A10G024200 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.9e-179 632.9 433 72.7
PGSC0003DMG400022831 Solanum tuberosum HOM05D006332 ORTHO05D008421 5.5e-179 631.3 438 72.6
Solyc10g008990.4 Solanum lycopersicum HOM05D006332 ORTHO05D008421 2.1e-178 629.4 435 72.6
PSO063G3883 Papaver somniferum HOM05D006332 ORTHO05D008421 3.5e-178 628.6 436 70.0
Gorai.011G026200 Gossypium raimondii HOM05D006332 ORTHO05D008421 8.7e-177 624.0 427 72.6
HanXRQChr04g0124141 Helianthus annuus HOM05D006332 ORTHO05D008421 8.7e-177 624.0 431 73.3
CSS0022240 Camellia sinensis var. sinensis HOM05D006332 ORTHO05D008421 1.9e-176 622.9 433 74.6
MSTRG.13186 Avicennia marina HOM05D006332 ORTHO05D008421 7.4e-176 620.9 433 73.4
Eucgr.D00641 Eucalyptus grandis HOM05D006332 ORTHO05D008421 7.4e-176 620.9 432 73.8
Oeu053924.1 Olea europaea HOM05D006332 ORTHO05D008421 1.6e-175 619.8 433 73.7
THA.LOC104817534 Tarenaya hassleriana HOM05D006332 ORTHO05D008421 1.6e-175 619.8 436 72.0
Gohir.D10G024900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 2.8e-175 619.0 426 72.5
TWI63G1670 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 2.8e-175 619.0 455 71.0
PSO782G1256 Papaver somniferum HOM05D006332 ORTHO05D008421 4.8e-175 618.2 436 69.0
Aqoxy1G02544 Aquilegia oxysepala HOM05D006332 ORTHO05D008421 1.4e-174 616.7 433 69.3
AT2G47960 Arabidopsis thaliana HOM05D006332 ORTHO05D008421 2.0e-173 612.8 434 70.7
Thhalv10018568m.g Eutrema salsugineum HOM05D006332 ORTHO05D008421 5.8e-173 611.3 431 70.3
Migut.H01511 Erythranthe guttata HOM05D006332 ORTHO05D008421 1.7e-172 609.8 448 70.8
Carub.0004s3069 Capsella rubella HOM05D006332 ORTHO05D008421 4.9e-172 608.2 434 69.8
AL4G47550 Arabidopsis lyrata HOM05D006332 ORTHO05D008421 8.4e-172 607.4 431 70.5
Ciclev10015324m.g Citrus clementina HOM05D006332 ORTHO05D008421 2.1e-170 602.8 441 70.3
BcaC02g12534 Brassica carinata HOM05D006332 ORTHO05D008421 3.9e-169 598.6 431 69.4
Sp4g29880 Schrenkiella parvula HOM05D006332 ORTHO05D008421 8.7e-169 597.4 434 68.2
ATR0680G340 Amborella trichopoda HOM05D006332 ORTHO05D008421 1.1e-168 597.0 428 72.0
ECA236G3091 Erigeron canadensis HOM05D006332 ORTHO05D008421 3.7e-167 592.0 438 68.7
Nitab4.5_0003942g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 4.8e-167 591.7 439 69.7
HanXRQChr01g0003951 Helianthus annuus HOM05D006332 ORTHO05D008421 6.3e-167 591.3 428 69.6
Nn6g34413 Nelumbo nucifera HOM05D006332 ORTHO05D008421 6.3e-167 591.3 436 67.9
C04p00010 Brassica napus HOM05D004682 ORTHO05D006197 8.2e-167 590.9 424 69.3
BolC4t21648H Brassica oleracea HOM05D004682 ORTHO05D006197 8.2e-167 590.9 424 69.3
A05p00090 Brassica napus HOM05D004682 ORTHO05D006197 1.4e-166 590.1 428 68.7
BraA05t19005Z Brassica rapa HOM05D004682 ORTHO05D006197 1.4e-166 590.1 428 68.7
BcaB02g08727 Brassica carinata HOM05D006332 ORTHO05D008421 5.3e-166 588.2 436 68.8
Peaxi162Scf00530g00823 Petunia axillaris HOM05D006332 ORTHO05D008421 5.3e-166 588.2 434 70.3
EL10Ac8g20347 Beta vulgaris HOM05D006332 ORTHO05D008421 2.9e-164 582.4 423 68.3
CDE08G0172 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 2.9e-164 582.4 428 68.9
AUR62016979 Chenopodium quinoa HOM05D006332 ORTHO05D008421 3.0e-161 572.4 427 68.6
HPP92_001753 Vanilla planifolia HOM05D006332 ORTHO05D008421 3.0e-161 572.4 441 64.6
Sabra04G0025000 Salix brachista HOM05D006332 ORTHO05D008421 5.1e-161 571.6 492 63.2
AUR62014792 Chenopodium quinoa HOM05D006332 ORTHO05D008421 3.1e-158 562.4 443 66.6
ECA248G3961 Erigeron canadensis HOM05D006332 ORTHO05D008421 7.7e-157 557.8 432 65.3
Zm00001eb044550 Zea mays HOM05D006332 ORTHO05D008421 1.4e-155 553.5 442 65.4
Aa31LG1G29380 Aethionema arabicum HOM05D006332 ORTHO05D008421 9.4e-155 550.8 431 65.4
CARHR143350 Cardamine hirsuta HOM05D006332 ORTHO05D008421 6.1e-154 548.1 377 72.4
Nn1g04020 Nelumbo nucifera HOM05D006332 ORTHO05D008421 4.4e-152 542.0 360 76.4
Cfa000416 Carpinus fangiana HOM05D006332 ORTHO05D008421 9.7e-152 540.8 338 79.6
Hma1.2p1_0126F.1_g059220 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 9.7e-152 540.8 445 63.6
Lsat_1_v5_gn_7_19001 Lactuca sativa HOM05D006332 ORTHO05D008421 5.3e-150 535.0 424 65.8
MBI17_g03748_MAGBIO Magnolia biondii HOM05D006332 ORTHO05D008421 1.2e-149 533.9 424 65.6
Hma1.2p1_0881F.1_g231960 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 6.1e-146 521.5 338 78.4
SGA_v2.0_scaffold49G18281 Striga asiatica HOM05D006332 ORTHO05D008421 1.0e-145 520.8 447 63.1
DCAR_004087 Daucus carota HOM05D006332 ORTHO05D008421 2.5e-139 499.6 346 72.5
Lsat_1_v5_gn_1_127821 Lactuca sativa HOM05D006332 ORTHO05D008421 2.8e-135 486.1 432 59.3
Duzib192G0908 Durio zibethinus HOM05D006332 ORTHO05D008421 3.1e-134 482.6 360 69.4
Hund21245 Selenicereus undatus HOM05D006332 ORTHO05D008421 3.1e-134 482.6 435 60.2
Nitab4.5_0009738g0010 Nicotiana tabacum HOM05D006332 ORTHO05D008421 4.5e-133 478.8 359 68.8
unitig_8.g3355 Utricularia gibba HOM05D006332 ORTHO05D008421 9.4e-131 471.1 443 59.8
Pp3c1_28670 Physcomitrium patens HOM05D006332 ORTHO05D008421 6.3e-127 458.4 430 52.8
CAN.G413.15 Capsicum annuum HOM05D006332 ORTHO05D008421 3.1e-126 456.1 328 69.5
AagrBONN_evm.TU.Sc2ySwM_344.1820 Anthoceros agrestis HOM05D006332 ORTHO05D008421 5.4e-126 455.3 427 52.5
Mapoly0122s0006 Marchantia polymorpha HOM05D006332 ORTHO05D008421 2.7e-125 453.0 432 51.6
Sc24g0000810 Simmondsia chinensis HOM05D006332 ORTHO05D008421 1.2e-122 444.1 600 45.0
SMO364G0571 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 1.0e-121 441.0 423 52.5
Atru.chr10.1934 Acer truncatum HOM05D006332 ORTHO05D008421 5.9e-117 425.2 281 76.2
CBR_g24248 Chara braunii HOM05D006332 ORTHO05D008421 7.8e-93 345.1 446 43.7
SMO364G0067 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 6.2e-90 335.5 308 54.2
Gohir.A10G024325 Gossypium hirsutum HOM05D006332 ORTHO05D008421 3.8e-87 326.2 200 81.0
SHI01800 Sapria himalayana HOM05D006332 ORTHO05D008421 2.8e-82 310.1 271 63.5
Nitab4.5_0009738g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 7.1e-78 295.4 333 49.8
Sopen10g004770 Solanum pennellii HOM05D006332 ORTHO05D008421 2.1e-74 283.9 212 64.2
Gohir.A10G024350 Gossypium hirsutum HOM05D006332 ORTHO05D008421 2.8e-50 203.8 153 65.4
PRCOL_00003805 Prasinoderma coloniale HOM05D006332 ORTHO05D008421 4.3e-43 179.9 487 30.2
SHI01798 Sapria himalayana HOM05D000002 ORTHO05D000001 6.9e-41 172.6 207 52.2
Atru.chr10.1933 Acer truncatum HOM05D006332 ORTHO05D008421 1.0e-36 158.7 119 64.7
Ciclev10009862m.g Citrus clementina HOM05D006332 ORTHO05D008421 4.5e-32 143.3 102 68.6
PSO017G7020 Papaver somniferum HOM05D006332 ORTHO05D000676 2.9e-23 114.0 113 49.6
TPR.G24681 Trifolium pratense HOM05D006332 ORTHO05D001923 8.0e-21 105.9 62 80.6
PSO170G5489 Papaver somniferum HOM05D006332 ORTHO05D008421 1.8e-20 104.8 99 50.5
Nitab4.5_0009738g0030 Nicotiana tabacum HOM05D006332 ORTHO05D008421 1.6e-16 91.7 91 54.9
TPR.G32042 Trifolium pratense HOM05D006332 ORTHO05D034078 4.7e-13 80.1 40 95.0
Os10g0498800 Oryza sativa ssp. japonica HOM05D006332 ORTHO05D008421 2.6e-11 74.3 64 53.1
CDE02G4141 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 4.9e-10 70.1 116 37.9
Medtr2g027310 Medicago truncatula HOM05D006332 ORTHO05D034078 3.5e-08 63.9 34 85.3
Cpa.g.sc777.3 Carica papaya HOM05D006332 ORTHO05D034078 5.0e-07 60.1 37 73.0
Haze_21185 Corylus avellana HOM05D000405 ORTHO05D000712 9.5e-06 55.8 26 92.3


User provided reference genes

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