Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G227100 Phaseolus vulgaris HOM05D007570 ORTHO05D009365 1.1e-137 495.4 353 100.0
VMungo0251G2923 Vigna mungo HOM05D007570 ORTHO05D009365 2.8e-117 427.6 353 90.7
Glyma.07G194900 Glycine max HOM05D007570 ORTHO05D009365 1.3e-101 375.6 353 83.9
Lj4g0005287 Lotus japonicus HOM05D007570 ORTHO05D009365 1.7e-77 295.4 358 73.5
Psat7g112960 Pisum sativum HOM05D007570 ORTHO05D009365 4.5e-75 287.3 354 72.3
TPR.G12015 Trifolium pratense HOM05D007570 ORTHO05D009365 6.5e-74 283.5 354 70.6
Medtr4g089005 Medicago truncatula HOM05D007570 ORTHO05D009365 5.5e-73 280.4 356 72.2
Ca_18529_v3 Cicer arietinum L. HOM05D001301 ORTHO05D009365 2.7e-72 278.1 353 72.5
Medtr8g064830 Medicago truncatula HOM05D007570 ORTHO05D009365 8.8e-71 273.1 351 72.4
Lalb_Chr16g0383631 Lupinus albus HOM05D007570 ORTHO05D009365 4.4e-70 270.8 357 69.5
arahy.Tifrunner.gnm1.ann1.3SI8EE Arachis hypogaea HOM05D000112 ORTHO05D009365 9.4e-65 253.1 349 68.5
arahy.Tifrunner.gnm1.ann1.K3ZWQ5 Arachis hypogaea HOM05D000112 ORTHO05D009365 9.4e-65 253.1 349 68.5
Ciclev10030585m.g Citrus clementina HOM05D007570 ORTHO05D009365 9.2e-52 209.9 310 67.7
Potri.019G043101 Populus trichocarpa HOM05D007570 ORTHO05D009365 1.3e-50 206.1 363 60.1
Thecc.05G226900 Theobroma cacao HOM05D007570 ORTHO05D009365 2.9e-50 204.9 309 69.6
Sabra19G0053700 Salix brachista HOM05D007570 ORTHO05D009365 8.6e-50 203.4 306 68.3
CiPaw.05G211100 Carya illinoinensis HOM05D007570 ORTHO05D009365 1.1e-49 203.0 309 70.6
Gohir.A01G216000 Gossypium hirsutum HOM05D007570 ORTHO05D009365 1.9e-49 202.2 316 66.1
CANSAT78G1681 Cannabis sativa HOM05D007570 ORTHO05D009365 4.3e-49 201.1 322 64.3
Atru.chr6.18 Acer truncatum HOM05D007570 ORTHO05D009365 7.3e-49 200.3 354 60.7
Gohir.D01G204800 Gossypium hirsutum HOM05D007570 ORTHO05D009365 6.1e-48 197.2 316 65.5
MD03G1142100 Malus domestica HOM05D007570 ORTHO05D009365 8.0e-48 196.8 306 67.0
Gorai.002G249100 Gossypium raimondii HOM05D007570 ORTHO05D009365 1.4e-47 196.1 316 65.2
TWI34G1038 Tripterygium wilfordii HOM05D007570 ORTHO05D009365 1.2e-46 193.0 307 67.4
MD11G1161200 Malus domestica HOM05D007570 ORTHO05D009365 1.3e-45 189.5 145 62.1
FvH4_7g02371 Fragaria vesca HOM05D007570 ORTHO05D009365 3.7e-45 188.0 304 68.8
FAN06G1073 Fragaria x ananassa HOM05D007570 ORTHO05D009365 4.1e-44 184.5 304 68.4
Duzib106G0838 Durio zibethinus HOM05D007570 ORTHO05D009365 4.6e-43 181.0 308 66.2
Eucgr.F03126 Eucalyptus grandis HOM05D007570 ORTHO05D009365 7.8e-43 180.3 142 60.6
Eucgr.A02378 Eucalyptus grandis HOM05D007570 ORTHO05D009365 1.5e-41 176.0 155 56.8
PGR031G1904 Punica granatum HOM05D007570 ORTHO05D009365 1.9e-41 175.6 142 57.0
Manes.08G159400 Manihot esculenta HOM05D007570 ORTHO05D009365 1.6e-40 172.6 309 64.7
PSO210G6895 Papaver somniferum HOM05D007570 ORTHO05D009365 4.7e-40 171.0 165 50.3
PSO832G0129 Papaver somniferum HOM05D007570 ORTHO05D009365 1.8e-39 169.1 148 54.1
FAN01G3111 Fragaria x ananassa HOM05D007570 ORTHO05D009365 1.2e-38 166.4 142 56.3
Nitab4.5_0002344g0040 Nicotiana tabacum HOM05D007570 ORTHO05D009365 2.0e-38 165.6 176 49.4
Lj5C421G19 Lonicera japonica HOM05D007570 ORTHO05D009365 1.3e-37 162.9 178 52.2
Lsat_1_v5_gn_5_103340 Lactuca sativa HOM05D007570 ORTHO05D009365 7.0e-36 157.1 137 58.4
Solyc01g099530.3 Solanum lycopersicum HOM05D001281 ORTHO05D001139 1.6e-35 156.0 152 52.0
Sc11g0002770 Simmondsia chinensis HOM05D007570 ORTHO05D009365 1.3e-34 152.9 142 53.5
CSS0011257 Camellia sinensis var. sinensis HOM05D007570 ORTHO05D009365 3.9e-34 151.4 139 58.3
Nitab4.5_0008329g0060 Nicotiana tabacum HOM05D001281 ORTHO05D009365 6.6e-34 150.6 138 53.6
Dinv40321 Davidia involucrata HOM05D007570 ORTHO05D009365 1.9e-33 149.1 365 37.8
MSTRG.27980 Avicennia marina HOM05D007570 ORTHO05D009365 2.5e-33 148.7 152 50.0
CSS0020002 Camellia sinensis var. sinensis HOM05D007570 ORTHO05D009365 2.5e-33 148.7 139 57.6
Migut.O00416 Erythranthe guttata HOM05D007570 ORTHO05D009365 2.5e-33 148.7 162 47.5
Cc02_g33170 Coffea canephora HOM05D007570 ORTHO05D009365 5.6e-33 147.5 306 38.9
Aqoxy5G04288 Aquilegia oxysepala HOM05D007570 ORTHO05D009365 7.3e-33 147.1 323 60.7
Hma1.2p1_1374F.1_g278810 Hydrangea macrophylla HOM05D007570 ORTHO05D009365 2.1e-32 145.6 274 43.8
Hund19367 Selenicereus undatus HOM05D007570 ORTHO05D009365 6.2e-32 144.1 184 44.0
Rhsim07G0187500 Rhododendron simsii HOM05D001660 ORTHO05D003277 1.8e-31 142.5 169 47.9
RcHm_v2.0_Chr1g0384651 Rosa chinensis HOM05D007570 ORTHO05D009365 2.3e-31 142.1 304 61.2
Peaxi162Scf00037g01028 Petunia axillaris HOM05D007570 ORTHO05D009365 3.1e-31 141.7 137 54.0
Cfa016108 Carpinus fangiana HOM05D007570 ORTHO05D009365 1.4e-28 132.9 239 72.0
Migut.N02077 Erythranthe guttata HOM05D007570 ORTHO05D009365 5.4e-28 131.0 150 46.7
Ah.10g033640 Amaranthus hybridus HOM05D007570 ORTHO05D009365 1.2e-27 129.8 186 40.9
PGSC0003DMG400024750 Solanum tuberosum HOM05D007570 ORTHO05D009365 7.8e-27 127.1 152 45.4
Sopen01g043040 Solanum pennellii HOM05D007570 ORTHO05D009365 1.3e-26 126.3 152 46.7
Thhalv10012597m.g Eutrema salsugineum HOM05D007570 ORTHO05D009365 1.7e-26 125.9 178 40.4
AL6G25570 Arabidopsis lyrata HOM05D007570 ORTHO05D009365 9.5e-25 120.2 171 42.7
DCAR_001944 Daucus carota HOM05D007570 ORTHO05D009365 3.6e-24 118.2 108 53.7
Actinidia35565 Actinidia chinensis HOM05D007570 ORTHO05D009365 1.4e-23 116.3 103 57.3
Nn1g08626 Nelumbo nucifera HOM05D007570 ORTHO05D009365 2.4e-23 115.5 162 42.6
Sp6g29270 Schrenkiella parvula HOM05D007570 ORTHO05D009365 3.4e-22 111.7 173 39.9
HPP92_020822 Vanilla planifolia HOM05D007570 ORTHO05D009365 4.4e-22 111.3 141 44.0
HanXRQChr10g0294781 Helianthus annuus HOM05D007570 ORTHO05D009365 5.8e-22 110.9 162 42.0
EL10Ac2g03647 Beta vulgaris HOM05D007570 ORTHO05D009365 2.2e-21 109.0 276 35.5
SalBow3G3428 Salvia bowleyana HOM05D007570 ORTHO05D009365 3.8e-21 108.2 98 54.1
BcaB08g36948 Brassica carinata HOM05D007570 ORTHO05D009365 1.4e-20 106.3 144 42.4
CAN.G665.19 Capsicum annuum HOM05D007570 ORTHO05D009365 2.4e-20 105.5 165 40.0
A10p23910 Brassica napus HOM05D007570 ORTHO05D009365 1.6e-19 102.8 162 42.0
BraA10t44455Z Brassica rapa HOM05D007570 ORTHO05D009365 1.6e-19 102.8 162 42.0
BcaC04g19010 Brassica carinata HOM05D007570 ORTHO05D009365 2.1e-19 102.4 162 42.0
BolC9t59076H Brassica oleracea HOM05D007570 ORTHO05D009365 4.6e-19 101.3 170 40.0
C09p62380 Brassica napus HOM05D007570 ORTHO05D009365 1.0e-18 100.1 162 41.4
CARHR198540 Cardamine hirsuta HOM05D007570 ORTHO05D009365 1.3e-18 99.8 178 37.1
Glyma.13G181601 Glycine max HOM05D007570 ORTHO05D009365 2.3e-18 99.0 51 90.2
Carub.0006s1294 Capsella rubella HOM05D007570 ORTHO05D009365 3.9e-18 98.2 183 35.0
AT5G14770 Arabidopsis thaliana HOM05D007570 ORTHO05D009365 4.3e-17 94.7 144 38.2
FAN03G2441 Fragaria x ananassa HOM05D002709 ORTHO05D002914 2.8e-16 92.0 103 51.5
MD00G1202400 Malus domestica HOM05D007570 ORTHO05D009365 4.8e-16 91.3 66 68.2
TAR625G0236 Trochodendron aralioides HOM05D007570 ORTHO05D009365 2.6e-14 85.5 313 54.0
AUR62028022 Chenopodium quinoa HOM05D007570 ORTHO05D009365 5.8e-14 84.3 80 46.2
FAN10G3422 Fragaria x ananassa HOM05D007570 ORTHO05D009365 1.3e-13 83.2 63 66.7
Oeu043366.2 Olea europaea HOM05D007570 ORTHO05D009365 2.4e-12 79.0 103 45.6
Cpa.g.sc909.2 Carica papaya HOM05D007570 ORTHO05D009365 3.5e-11 75.1 235 26.4
ECA234G3939 Erigeron canadensis HOM05D007570 ORTHO05D009365 1.3e-10 73.2 109 38.5
Prupe.2G007100 Prunus persica HOM05D007570 ORTHO05D009365 5.6e-09 67.8 52 61.5
ATR1127G166 Amborella trichopoda HOM05D007358 ORTHO05D009117 1.3e-08 66.6 113 32.7
Lj5C430G7 Lonicera japonica HOM05D007570 ORTHO05D009365 6.2e-08 64.3 139 38.1
BcaB01g06201 Brassica carinata HOM05D007455 ORTHO05D009431 1.1e-07 63.5 136 30.1
AUR62003179 Chenopodium quinoa HOM05D001563 ORTHO05D001956 1.4e-07 63.2 165 32.1
FAN09G4588 Fragaria x ananassa HOM05D000001 ORTHO05D009676 1.4e-07 63.2 110 33.6
Nn5g30586 Nelumbo nucifera HOM05D005287 ORTHO05D006893 1.8e-07 62.8 197 26.9
FAN05G2826 Fragaria x ananassa HOM05D000001 ORTHO05D009676 2.4e-07 62.4 110 33.6
HPP92_019906 Vanilla planifolia HOM05D007063 ORTHO05D008822 3.1e-07 62.0 137 32.1
FAN20G2333 Fragaria x ananassa HOM05D006858 ORTHO05D008767 5.3e-07 61.2 83 37.3
Sed0026487 Sechium edule HOM05D007623 ORTHO05D009641 5.3e-07 61.2 112 30.4
MD00G1202300 Malus domestica HOM05D007570 ORTHO05D009365 9.0e-07 60.5 71 43.7
AUR62004993 Chenopodium quinoa HOM05D007128 ORTHO05D009059 1.2e-06 60.1 123 28.5
MELO3C026661.2 Cucumis melo HOM05D007623 ORTHO05D009641 1.2e-06 60.1 117 28.2
FAN02G2208 Fragaria x ananassa HOM05D000001 ORTHO05D009676 2.6e-06 58.9 110 31.8
Sp3g30160 Schrenkiella parvula HOM05D005287 ORTHO05D006893 3.4e-06 58.5 160 31.2
BolC1t01449H Brassica oleracea HOM05D000001 ORTHO05D000003 4.5e-06 58.2 129 32.6
VMungo1215G2284 Vigna mungo HOM05D000001 ORTHO05D009676 4.5e-06 58.2 108 29.6
BraA03t09431Z Brassica rapa HOM05D007455 ORTHO05D009431 5.8e-06 57.8 136 29.4
FvH4_6g14840 Fragaria vesca HOM05D000001 ORTHO05D009676 5.8e-06 57.8 110 30.9
Oeu007697.1 Olea europaea HOM05D005287 ORTHO05D006893 5.8e-06 57.8 151 32.5
Aa31LG11G14690 Aethionema arabicum HOM05D007570 ORTHO05D009365 9.9e-06 57.0 33 69.7
C03p00670 Brassica napus HOM05D007455 ORTHO05D009431 9.9e-06 57.0 136 29.4
BolC3t12630H Brassica oleracea HOM05D007455 ORTHO05D009431 9.9e-06 57.0 136 29.4
ClCG04G012320 Citrullus lanatus HOM05D002453 ORTHO05D002107 9.9e-06 57.0 131 26.7
PSO675G5598 Papaver somniferum HOM05D008994 ORTHO05D010954 9.9e-06 57.0 79 39.2
TPR.G23674 Trifolium pratense HOM05D000001 ORTHO05D009676 9.9e-06 57.0 110 29.1


User provided reference genes

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