Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G222700 Phaseolus vulgaris HOM05D006902 ORTHO05D008468 2.2e-65 252.7 163 100.0
VMungo0251G2276 Vigna mungo HOM05D006902 ORTHO05D008468 7.1e-56 221.1 163 90.2
Glyma.07G190800 Glycine max HOM05D006902 ORTHO05D008468 1.1e-43 180.6 163 81.0
Lj4g0003242 Lotus japonicus HOM05D006902 ORTHO05D008468 6.0e-39 164.9 177 72.9
Glyma.08G058500 Glycine max HOM05D006902 ORTHO05D008468 3.0e-38 162.5 159 77.4
Ca_18489_v3 Cicer arietinum L. HOM05D006902 ORTHO05D008468 1.4e-35 153.7 169 69.8
Ca_29542_v3 Cicer arietinum L. HOM05D006902 ORTHO05D008468 1.4e-35 153.7 169 69.8
TPR.G32415 Trifolium pratense HOM05D006902 ORTHO05D008468 1.4e-35 153.7 166 69.3
Medtr4g090910 Medicago truncatula HOM05D006902 ORTHO05D008468 1.3e-33 147.1 165 66.1
arahy.Tifrunner.gnm1.ann1.EL94R1 Arachis hypogaea HOM05D006902 ORTHO05D008468 5.5e-32 141.7 162 68.5
arahy.Tifrunner.gnm1.ann1.G41NRI Arachis hypogaea HOM05D006902 ORTHO05D008468 2.1e-31 139.8 162 67.9
Psat7g109600 Pisum sativum HOM05D006902 ORTHO05D008468 3.5e-31 139.0 177 61.6
Lalb_Chr16g0383411 Lupinus albus HOM05D006902 ORTHO05D008468 5.1e-30 135.2 151 70.2
Ciclev10016776m.g Citrus clementina HOM05D006902 ORTHO05D008468 2.5e-24 116.3 173 61.8
Dinv40499 Davidia involucrata HOM05D006902 ORTHO05D008468 2.7e-23 112.8 165 49.1
Manes.16G021000 Manihot esculenta HOM05D006902 ORTHO05D008468 6.7e-22 108.2 163 53.4
CsaV3_4G028920 Cucumis sativus L. HOM05D006902 ORTHO05D008468 4.3e-21 105.5 168 46.4
FvH4_3g04070 Fragaria vesca HOM05D006902 ORTHO05D008468 5.7e-21 105.1 159 42.8
DCAR_008067 Daucus carota HOM05D006902 ORTHO05D008468 2.2e-20 103.2 161 51.6
Potri.011G043400 Populus trichocarpa HOM05D006902 ORTHO05D008468 2.2e-20 103.2 160 40.6
QL03p053069 Quercus lobata HOM05D006902 ORTHO05D008468 2.2e-20 103.2 169 50.3
RcHm_v2.0_Chr5g0006551 Rosa chinensis HOM05D006902 ORTHO05D008468 2.2e-20 103.2 167 44.9
Potri.004G035200 Populus trichocarpa HOM05D006902 ORTHO05D008468 2.8e-20 102.8 152 41.4
Sed0006938 Sechium edule HOM05D006902 ORTHO05D008468 3.7e-20 102.4 169 47.3
Thecc.06G198400 Theobroma cacao HOM05D006902 ORTHO05D008468 3.7e-20 102.4 166 56.0
FvH4_1g04320 Fragaria vesca HOM05D006902 ORTHO05D008468 6.3e-20 101.7 167 46.1
Hma1.2p1_0144F.1_g064740 Hydrangea macrophylla HOM05D006902 ORTHO05D008468 8.2e-20 101.3 166 47.6
Prupe.4G036300 Prunus persica HOM05D006902 ORTHO05D008468 1.1e-19 100.9 164 50.6
Atru.chr10.2001 Acer truncatum HOM05D006902 ORTHO05D008468 1.8e-19 100.1 161 42.2
Actinidia24062 Actinidia chinensis HOM05D006902 ORTHO05D008468 1.8e-19 100.1 170 48.2
Sc05g0008060 Simmondsia chinensis HOM05D006902 ORTHO05D008468 2.4e-19 99.8 171 50.9
Sc05g0010000 Simmondsia chinensis HOM05D006902 ORTHO05D008468 2.4e-19 99.8 171 50.9
FAN28G0433 Fragaria x ananassa HOM05D006902 ORTHO05D008468 6.9e-19 98.2 167 43.1
Gorai.009G173300 Gossypium raimondii HOM05D006902 ORTHO05D008468 9.1e-19 97.8 167 51.5
TWI38G1087 Tripterygium wilfordii HOM05D006902 ORTHO05D008468 9.1e-19 97.8 161 52.2
Gohir.D05G168200 Gossypium hirsutum HOM05D006902 ORTHO05D008468 1.2e-18 97.4 167 51.5
Eucgr.D00710 Eucalyptus grandis HOM05D006902 ORTHO05D008468 1.5e-18 97.1 165 58.2
ClCG04G003630 Citrullus lanatus HOM05D006902 ORTHO05D008468 2.0e-18 96.7 183 38.3
Eucgr.L03594 Eucalyptus grandis HOM05D006902 ORTHO05D008468 2.6e-18 96.3 164 57.9
Gohir.A05G165200 Gossypium hirsutum HOM05D006902 ORTHO05D008468 2.6e-18 96.3 167 49.1
MSTRG.14679 Avicennia marina HOM05D006902 ORTHO05D008468 4.5e-18 95.5 160 54.4
CiPaw.09G158500 Carya illinoinensis HOM05D006902 ORTHO05D008468 4.5e-18 95.5 173 52.6
PGSC0003DMG402010824 Solanum tuberosum HOM05D006902 ORTHO05D008468 4.5e-18 95.5 163 38.7
Sopen10g004990 Solanum pennellii HOM05D006902 ORTHO05D008468 5.9e-18 95.1 168 37.5
Sabra11G0030000 Salix brachista HOM05D006902 ORTHO05D008468 7.7e-18 94.7 157 39.5
PSO063G2673 Papaver somniferum HOM05D006902 ORTHO05D008468 5.0e-17 92.0 165 47.3
MD10G1302800 Malus domestica HOM05D006902 ORTHO05D008468 8.5e-17 91.3 170 37.1
Rhsim02G0120100 Rhododendron simsii HOM05D006902 ORTHO05D008468 1.1e-16 90.9 172 39.5
CANSAT56G2140 Cannabis sativa HOM05D006902 ORTHO05D008468 3.2e-16 89.4 170 38.2
Duzib235G0611 Durio zibethinus HOM05D000306 ORTHO05D000410 3.2e-16 89.4 130 52.3
Lsat_1_v5_gn_4_57121 Lactuca sativa HOM05D006902 ORTHO05D008468 3.2e-16 89.4 179 40.8
PSO782G4966 Papaver somniferum HOM05D006902 ORTHO05D008468 3.2e-16 89.4 165 46.7
Aqoxy7G03119 Aquilegia oxysepala HOM05D006902 ORTHO05D008468 5.5e-16 88.6 164 44.5
Migut.H01513 Erythranthe guttata HOM05D006902 ORTHO05D008468 1.2e-15 87.4 170 47.1
Aa31LG1G3550 Aethionema arabicum HOM05D006902 ORTHO05D008468 1.4e-14 84.0 156 53.8
HanXRQChr17g0551071 Helianthus annuus HOM05D006902 ORTHO05D008468 3.0e-14 82.8 163 47.2
ECA234G0685 Erigeron canadensis HOM05D006902 ORTHO05D008468 5.1e-14 82.0 129 51.2
Sabra04G0021000 Salix brachista HOM05D006902 ORTHO05D008468 6.7e-14 81.6 160 35.6
Nn8g40519 Nelumbo nucifera HOM05D006902 ORTHO05D008468 1.5e-13 80.5 165 37.6
Oeu038228.1 Olea europaea HOM05D006902 ORTHO05D008468 7.4e-13 78.2 194 33.0
QL05p081948 Quercus lobata HOM05D006902 ORTHO05D008468 9.7e-13 77.8 169 49.1
THA.LOC104809549 Tarenaya hassleriana HOM05D006902 ORTHO05D008468 1.7e-12 77.0 157 48.4
AT1G11240 Arabidopsis thaliana HOM05D006902 ORTHO05D008468 2.2e-12 76.6 155 45.8
SalBow7G0974 Salvia bowleyana HOM05D006902 ORTHO05D008468 4.8e-12 75.5 121 52.9
AUR62014725 Chenopodium quinoa HOM05D006902 ORTHO05D008468 8.2e-12 74.7 159 49.1
PGR004G1238 Punica granatum HOM05D006902 ORTHO05D008468 8.2e-12 74.7 167 49.1
AUR62016906 Chenopodium quinoa HOM05D006902 ORTHO05D008468 1.1e-11 74.3 172 48.3
SGA_v2.0_scaffold159G37666 Striga asiatica HOM05D006902 ORTHO05D008468 1.8e-11 73.6 157 47.8
ATR0580G203 Amborella trichopoda HOM05D006902 ORTHO05D008468 4.1e-11 72.4 159 37.7
Os03g0353500 Oryza sativa ssp. japonica HOM05D006902 ORTHO05D008468 5.3e-11 72.0 165 43.6
EL10Ac8g20614 Beta vulgaris HOM05D006902 ORTHO05D008468 9.1e-11 71.2 160 49.4
C05p09500 Brassica napus HOM05D006902 ORTHO05D008468 9.1e-11 71.2 164 50.6
Carub.0001s1082 Capsella rubella HOM05D006902 ORTHO05D008468 9.1e-11 71.2 168 42.3
FAN25G0692 Fragaria x ananassa HOM05D006902 ORTHO05D008468 1.2e-10 70.9 144 38.2
BcaNung04470 Brassica carinata HOM05D006902 ORTHO05D008468 2.6e-10 69.7 163 50.3
A06p07900 Brassica napus HOM05D006902 ORTHO05D008468 2.6e-10 69.7 162 50.0
BraA06t23989Z Brassica rapa HOM05D006902 ORTHO05D008468 2.6e-10 69.7 162 50.0
Nitab4.5_0005936g0020 Nicotiana tabacum HOM05D006902 ORTHO05D008468 3.5e-10 69.3 164 48.2
BolC5t29692H Brassica oleracea HOM05D006902 ORTHO05D008468 4.5e-10 68.9 164 50.0
Nitab4.5_0003223g0030 Nicotiana tabacum HOM05D006902 ORTHO05D008468 7.7e-10 68.2 169 46.2
Sp1g09900 Schrenkiella parvula HOM05D006902 ORTHO05D008468 7.7e-10 68.2 161 44.1
Cc02_g12510 Coffea canephora HOM05D006902 ORTHO05D008468 1.3e-09 67.4 168 49.4
AL1G22260 Arabidopsis lyrata HOM05D006902 ORTHO05D008468 2.2e-09 66.6 162 42.6
CARHR011470 Cardamine hirsuta HOM05D006902 ORTHO05D008468 2.2e-09 66.6 164 49.4
Ah.14g088940 Amaranthus hybridus HOM05D006902 ORTHO05D008468 8.5e-09 64.7 162 47.5
vmacro15868 Vaccinium macrocarpon HOM05D006902 ORTHO05D008468 1.5e-08 63.9 230 30.4
FAN23G2525 Fragaria x ananassa HOM05D006902 ORTHO05D008468 1.9e-08 63.5 106 41.5
COL.COLO4_31574 Corchorus olitorius HOM05D000306 ORTHO05D000410 4.2e-08 62.4 163 47.2
FAN19G2227 Fragaria x ananassa HOM05D006902 ORTHO05D008468 5.5e-08 62.0 106 39.6
unitig_8.g3353 Utricularia gibba HOM05D006902 ORTHO05D008468 7.2e-08 61.6 148 44.6
Cpa.g.c36644 Carica papaya HOM05D006902 ORTHO05D008468 1.2e-07 60.8 35 74.3
FAN26G1405 Fragaria x ananassa HOM05D006902 ORTHO05D008468 1.6e-07 60.5 104 40.4
Ah.09g236070 Amaranthus hybridus HOM05D006902 ORTHO05D008468 2.7e-07 59.7 161 44.7
Thhalv10008794m.g Eutrema salsugineum HOM05D006902 ORTHO05D008468 2.7e-07 59.7 168 47.0
Zm00001eb394590 Zea mays HOM05D006902 ORTHO05D008468 3.6e-07 59.3 165 40.6
SEGI_26187 Sequoiadendron giganteum HOM05D006902 ORTHO05D008468 4.7e-07 58.9 175 38.9
Hund23624 Selenicereus undatus HOM05D006902 ORTHO05D008468 6.1e-07 58.5 84 57.1
BcaC05g24999 Brassica carinata HOM05D006902 ORTHO05D008468 8.0e-07 58.2 35 71.4
Cpa.g.sc27.115 Carica papaya HOM05D006902 ORTHO05D008468 8.0e-07 58.2 105 39.0
BolC8t49055H Brassica oleracea HOM05D006902 ORTHO05D008468 6.7e-06 55.1 164 48.2


User provided reference genes

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